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-  2019 

Semi-nonparametric modeling of topological domain formation from epigenetic data

DOI: 10.1186/s13015-019-0142-y

Keywords: Chromatin, Conformation, Capture, Topological domains, Epigenetic modifications, Prediction

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Abstract:

We note that (6) is convex, but it is a nonsmooth optimization problem because of the regularizer. We solve it efficiently by using an iterative algorithm from multiple kernel learning [23]. By Cauchy-Schwarz inequality

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