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药学学报  2013 

抗生素开发的新靶点:核糖开关

, PP. 1361-1368

Keywords: 核糖开关,耐药性,抗生素

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Abstract:

核糖开关是位于mrna区域的特定片段,被小分子配体激活后即可顺式调控基因表达,无需蛋白参与。经进化选择,大部分细菌内核糖开关采用必需代谢产物为配体,负责调控与配体生物合成或转运相关基因的表达。代谢产物类似物可以抑制核糖开关介导的基因表达,抑制细菌生长,甚至引起细菌死亡,因此核糖开关可以作为抗生素开发的新靶点。已经发现的几种先导化合物显示了以核糖开关为靶点的开发潜力。本文简要阐述了可以作为抗生素靶点的核糖开关及其作用机制,介绍了以核糖开关为靶点的新型抗生素高通量筛选及药物设计方法,并对可能遇到的困难进行了分析。

References

[1]  theuretzbacheru.acceleratingresistance,inadequateantibacterialdrugpipelinesandinternationalresponses[j].intjantimicrobagents,2012,39:295-299.
[2]  liaogj,hey,xiejp.novelinhibitorsagainstthebacterialsignalpeptidasei[j].actapharmsin(药学学报),2012,47:1561-1566.
[3]  blountkf,breakerrr.riboswitchesasantibacterialdrugtargets[j].natbiotechnol,2006,24:1558-1564.
[4]  weigandje,suessb.tetracyclineaptamer-controlledregulationofpre-mrnasplicinginyeast[j].nucleicacidsres,2007,35:4179-4185.
[5]  yanghy,diaoy,linjs,etal.engineeringandscreeningofartificialriboswitchasanovelgenecontrolelement[j].chinjbiotechnol(生物工程学报),2012,28:134-143.
[6]  barrickje,breakerrr.thedistributions,mechanisms,andstructuresofmetabolite-bindingriboswitches[j].genomebiol,2007,8:r239.
[7]  nudlere,mironovas.theriboswitchcontrolofbacterialmetabolism[j].trendsbiochemsci,2004,29:11-17.
[8]  sudarsann,cohen-chalamishs,nakamuras,etal.thiaminepyrophosphateriboswitchesaretargetsfortheantimicrobialcompoundpyrithiamine[j].chembiol,2005,12:1325-1335.
[9]  mccownpj,rotha,breakerrr.anexpandedcollectionandrefinedconsensusmodelofglmsribozymes[j].rna,2011,17:728-736.
[10]  duq,wangh,xiej.thiamin(vitaminb1)biosynthesisandregulation:arichsourceofantimicrobialdrugtargets?[j].intjbiolsci,2011,7:41-52.
[11]  mironovas,gusarovi,rafikovr,etal.sensingsmallmoleculesbynascentrna:amechanismtocontroltranscriptioninbacteria[j].cell,2002,111:747-756.
[12]  cressinae,chenl,moulinm,etal.identificationofnovelligandsforthiaminepyrophosphate(tpp)riboswitches[j].biochemsoctrans,2011,39:652-657.
[13]  powershj.riboflavin(vitaminb-2)andhealth[j].amjclinnutr,2003,77:1352-1360.
[14]  voglc,grills,schillingo,etal.characterizationofriboflavin(vitaminb2)transportproteinsfrombacillussubtilisandcorynebacteriumglutamicum[j].jbacteriol,2007,189:7367-7375.
[15]  leeer,blountkf,breakerrr.roseoflavinisanaturalantibacterialcompoundthatbindstofmnriboswitchesandregulatesgeneexpression[j].rnabiol,2009,6:187-194.
[16]  grundyfj,lehmansc,henkintm.thelboxregulon:lysinesensingbyleaderrnasofbacteriallysinebiosynthesisgenes[j].procnatlacadsciusa,2003,100:12057-12062.
[17]  rodionovda,vitreschakag,mironovaa,etal.regulationoflysinebiosynthesisandtransportgenesinbacteria:yetanotherrnariboswitch?[j].nucleicacidsres,2003,31:6748-6757.
[18]  huttonca,peruginima,gerrardja.inhibitionoflysinebiosynthesis:anevolvingantibioticstrategy[j].molbiosyst,2007,3:458-465.
[19]  mandalm,boeseb,barrickje,etal.riboswitchescontrolfundamentalbiochemicalpathwaysinbacillussubtilisandotherbacteria[j].cell,2003,113:577-586.
[20]  mandalm,breakerrr.generegulationbyriboswitches[j].natrevmolcellbiol,2004,5:451-463.
[21]  porwals,lals,cheemas,etal.phylogenyinaidofthepresentanovelmicrobiallineages:diversityinbacillus[j].plosone,2009,4:e4438.
[22]  sterc,allardm,boulangers,etal.experimentaltreatmentofstaphylococcusaureusbovineintramammaryinfectionusingaguanineriboswitchligandanalog[j].jdairysci,2013,96:1000-1008.
[23]  linkkh,guol,breakerrr.examinationofthestructuralandfunctionalversatilityofglmsribozymesbyusinginvitroselection[j].nucleicacidsres,2006,34:4968-4975.
[24]  görkeb,vogelj.noncodingrnacontrolofthemakingandbreakingofsugars[j].genesdev,2008,22:2914-2925.
[25]  winklerwc,nahvia,rotha,etal.controlofgeneexpressionbyanaturalmetabolite-responsiveribozyme[j].nature,2004,428:281-286.
[26]  mayerg,famulokm.high-throughput-compatibleassayforglmsriboswitchmetabolitedependence[j].chembiochem,2006,7:602-604.
[27]  zoetev,grosdidiera,michielino.docking,virtualhighthroughputscreeningandinsilicofragment-baseddrugdesign[j].jcellmolmed,2009,13:238-248.
[28]  rennerd,soukupj.antibioticdevelopmentbyinvestigationoftheglmsriboswitch[j].biophyj,2009,98:262a-263a.
[29]  haasal,launnp,begleytp.thi20,aremarkableenzymefromsaccharomycescerevisiaewithdualthiaminbiosyntheticanddegradationactivities[j].bioorgchem,2005,33:338-344.
[30]  deiganke,ferré-d'amaréar.riboswitches:discoveryofdrugsthattargetbacterialgene-regulatoryrnas[j].accchemres,2011,44:1329-1338.
[31]  penchovskyr,stoilovacc.riboswitch-basedantibacterialdrugdiscoveryusinghigh-throughputscreeningmethods[j].expertopindrugdiscov,2013,8:65-82.
[32]  dambachmd,winklerwc.expandingrolesformetabolitesensingregulatoryrnas[j].curropinmicrobiol,2009,12:161-169.
[33]  diaoy.induciblegeneexpressionofmammalianviarna-onlystrategies[j].chinbiotechnol(中国生物工程杂志),2011,31:120-125.
[34]  linjs,mcnattykp.aptamer-basedregionallyprotectedpcrforproteindetection[j].clinchem,2009,55:1686-1693.
[35]  suessb,weigandje.engineeredriboswitches:overview,problemsandtrends[j].rnabiol,2008,5:24-29.
[36]  weigandje,suessb.aptamersandriboswitches:perspectivesinbiotechnology[j].applmicrobiolbiotechnol,2009,85:229-236.
[37]  hermannt,tory.rnaasatargetforsmall-moleculetherapeutics[j].expertopintherpat,2005,15:49-62.
[38]  zhangr,liny.deg5.0,adatabaseofessentialgenesinbothprokaryotesandeukaryotes[j].nucleicacidsres,2009,37:d455-d458.
[39]  mulhbacherj,st-pierrep,lafontaineda.therapeuticapplicationsofribozymesandriboswitches[j].curropinpharmacol,2010,10:551-556.
[40]  sudarsann,wickiserjk,nakamuras,etal.anmrnastructureinbacteriathatcontrolsgeneexpressionbybindinglysine[j].genesdev,2003,17:2688-2697.
[41]  blountkf,wangjx,limj,etal.antibacteriallysineanalogsthattargetlysineriboswitches[j].natchembiol,2007,3:44-49.
[42]  kimjn,blountkf,puskarzi,etal.designandantimicrobialactionofpurineanaloguesthatbindguanineriboswitches[j].acschembiol,2009,4:915-927.
[43]  mulhbacherj,brouillettee,allardm,etal.novelriboswitchligandanalogsasselectiveinhibitorsofguanine-relatedmetabolicpathways[j].plospathog,2010,6:e1000865.
[44]  limj,grovebc,rotha,etal.characteristicsofligandrecognitionbyaglmsself-cleavingribozyme[j].angewchemintedengl,2006,45:6689-6693.
[45]  serranoa,fragos,velázquez-campoya,etal.roleofkeyresiduesattheflavinmononucleotide(fmn):adenylyltransferasecatalyticsiteofthebifunctionalriboflavinkinase/flavinadeninedinucleotide(fad)synthetasefromcorynebacteriumammoniagenes[j].intjmolsci,2012,13:14492-14517.
[46]  joostenv,vanberkelwj.flavoenzymes[j].curropinchembiol,2007,11:195-202.
[47]  winklerwc,cohen-chalamishs,breakerrr.anmrnastructurethatcontrolsgeneexpressionbybindingfmn[j].procnatlacadsciusa,2002,99:15908-15913.
[48]  sonensheinal,hochja,losickr.inbacillussubtillisanditsclosestrelatives:fromgenestocells[m].washington:asmpress,2002.
[49]  mansjöm,johanssonj.theriboflavinanalogroseoflavintargetsanfmn-riboswitchandblockslisteriamonocytogenesgrowth,butalsostimulatesvirulencegene-expressionandinfection[j].rnabiol,2011,8:674-680.
[50]  otte,stolzj,lehmannm,etal.therfnriboswitchofbacillussubtilisisatargetfortheantibioticroseoflavinproducedbystreptomycesdavawensis[j].rnabiol,2009,6:276-280.
[51]  pedrollidb,materna,wangj,etal.ahighlyspecializedflavinmononucleotideriboswitchrespondsdifferentlytosimilarligandsandconfersroseoflavinresistancetostreptomycesdavawensis[j].nucleicacidsres,2012,40:8662-8673.
[52]  yalowitzja,jayaramhn.moleculartargetsofguaninenucleotidesindifferentiation,proliferationandapoptosis[j].anticancerres,2000,20:2329-2338.
[53]  johansenle,nygaardp,lassenc,etal.definitionofasecondbacillussubtilispurreguloncomprisingthepurandxpt-pbuxoperonspluspbug,nupg(yxja),andpbue(ydhl)[j].jbacteriol,2003,185:5200-5209.
[54]  collinsja,irnovi,bakers,etal.mechanismofmrnadestabilizationbytheglmsribozyme[j].genesdev,2007,21:3356-3368.
[55]  blountk,puskarzi,penchovskyr,etal.developmentandapplicationofahigh-throughputassayforglmsriboswitchactivators[j].rnabiol,2006,3:77-81.
[56]  watsonpy,fedormj.theglmsriboswitchintegratessignalsfromactivatingandinhibitorymetabolitesinvivo[j].natstructmolbiol,2011,18:359-363.
[57]  langpt,brozellsr,mukherjees,etal.dock6:combiningtechniquestomodelrna-smallmoleculecomplexes[j].rna,2009,15:1219-1230.
[58]  daldropp,reyesfe,robinsonda,etal.novelligandsforapurineriboswitchdiscoveredbyrna-liganddocking[j].chembiol,2011,18:324-335.
[59]  yinsl,changyj,dengsp,etal.researchprogressofnewantibacterialdrugsthattargetbacterialquorumsensingsystems[j].actapharmsin(药学学报),2011,46:613-621.
[60]  kumarasamykk,tolemanma,walshtr,etal.emergenceofanewantibioticresistancemechanisminindia,pakistan,andtheuk:amolecular,biological,andepidemiologicalstudy[j].lancetinfectdis,2010,10:597-602.

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