Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ, 1990. Basic local alignment search tool. Journal of Molecular Biology, 215(3): 403-410 [本文引用:1]
[2]
Annesley S, Fisher P, 2009. Dictyostelium discoideum—a model for many reasons. Molecular and Cellular Biochemistry, 329(1-2): 73-91 [本文引用:1]
[3]
Baek K, Liu X, Ferron F, Shu S, Korn ED, Dominguez R, 2008. Modulation of actin structure and function by phosphorylation of Tyr-53 and profilin binding. Proceedings of the National Academy of Sciences, 105(33): 11748-11753 [本文引用:1]
[4]
Bailey TL, Boden M, Buske FA, Frith M, Grant CE, Clementi L, Ren J, Li WW, Noble WS, 2009. MEME SUITE: tools for motif discovery and searching. Nucleic Acids Research, 37(Web Server issue): W202-W208 [本文引用:1]
Condeelis J, Hall A, Bresnick A, Warren V, Hock R, Bennett H, Ogihara S, 1988. Actin polymerization and pseudopod extension during amoeboid chemotaxis. Cell Motility and the Cytoskeleton, 10(1-2): 77-90 [本文引用:1]
Deng HF, Liu CL, Li J, Fan YL, Ruan Y, 2007. The Analysis of Arabisopsis thaliana GuardCell-Specific Genes Promoter Motifs. Biotechnology Bulletin, 3: 145-148+151 (in Chinese) [本文引用:1]
[10]
D'Haeseleer P, 2006. What are DNA sequence motifs?Nature Biotechnology, 24(4): 423-425 [本文引用:3]
[11]
Dominguez R, Holmes KC, 2011. Actin structure and function. Annual Review of Biophysics, 40: 169-186 [本文引用:1]
[12]
Drouin G, Moniz de Sa M, Zuker M, 1995. The Giardia lamblia actin gene and the phylogeny of eukaryotes. Journal of Molecular Evolution, 41(6): 841-849 [本文引用:1]
[13]
Eichinger L, Pachebat JA, Glockner G, Rajand ream MA, Sucgang R, Berriman M, Song J, Olsen R, Szafranski K, Xu Q, Tunggal B, Kummerfeld S, Madera M, Konfortov BA, Rivero F, Bankier AT, Lehmann R, Hamlin N, Davies R, Gaudet P, Fey P, Pilcher K, Chen G, Saunders D, Sodergren E, Davis P, Kerhornou A, Nie X, Hall N, Anjard C, Hemphill L, Bason N, Farbrother P, Desany B, Just E, Morio T, Rost R, Churcher C, Cooper J, Haydock S, van Driessche N, Cronin A, Goodhead I, Muzny D, Mourier T, Pain A, Lu M, Harper D, Lindsay R, Hauser H, James K, Quiles M, Madan Babu M, Saito T, Buchrieser C, Wardroper A, Felder M, Thangavelu M, Johnson D, Knights A, Loulseged H, Mungall K, Oliver K, Price C, Quail MA, Urushihara H, Hernand ez J, Rabbinowitsch E, Steffen D, Sand ers M, Ma J, Kohara Y, Sharp S, Simmonds M, Spiegler S, Tivey A, Sugano S, White B, Walker D, Woodward J, Winckler T, Tanaka Y, Shaulsky G, Schleicher M, Weinstock G, Rosenthal A, Cox EC, Chisholm RL, Gibbs R, Loomis WF, Platzer M, Kay RR, Williams J, Dear PH, Noegel AA, Barrell B, Kuspa A, 2005. The genome of the social amoeba Dictyostelium discoideum. Nature, 435(7038): 43-57 [本文引用:1]
[14]
Eisenberg D, Marcotte EM, Xenarios I, Yeates TO, 2000. Protein function in the post-genomic era. Nature, 405(6788): 823-826 [本文引用:1]
[15]
Franceschini A, Szklarczyk D, Frankild S, Kuhn M, Simonovic M, Roth A, Lin J, Minguez P, Bork P, von Mering C, Jensen LJ, 2013. STRING v9. 1: protein-protein interaction networks, with increased coverage and integration. Nucleic Acids Research, 41(D1): D808-D815 [本文引用:2]
Goldman RD, Motility CoC, 1976. Cell motility: microtubules and related proteins. Book C. Cold Spring Harbor Laboratory, University of Michigan. 1-563 [本文引用:1]
[18]
Guan XG, Su WH, Yi F, Zhang D, Hao F, Zhang HG, Liu YJ, Feng XC, Ma TH, 2010. NPA motifs play a key role in plasma membrane targeting of aquaporin-4. IUBMB Life, 62(3): 222-226 [本文引用:2]
[19]
Hatayama M, Aruga J, 2010. Characterization of the tand em CWCH2 sequence motif: a hallmark of inter-zinc finger interactions. BMC Evolutionary Biology, 10(1): 1-18 [本文引用:1]
[20]
Joseph JM, Fey P, Ramalingam N, Liu XI, Rohlfs M, Noegel AA, Muller-Taubenberger A, Glockner G, Schleicher M, 2008. The actinome of Dictyostelium discoideum in comparison to actins and actin-related proteins from other organisms. PLoS One, 3(7): e2654 [本文引用:4]
[21]
Kapoor P, Sahasrabuddhe AA, Kumar A, Mitra K, Siddiqi MI, Gupta CM, 2008. An unconventional form of actin in protozoan hemoflagellate, Leishmania. Journal of Biological Chemistry, 283(33): 22760-22773 [本文引用:2]
[22]
Keeling PJ, 2001. Foraminifera and cercozoa are related in actin phylogeny: two orphans find a home?Molecular Biology and Evolution, 18(8): 1551-1557 [本文引用:1]
[23]
Kiel C, Beltrao P, Serrano L, 2008. Analyzing protein interaction networks using structural information. Annual Review of Biochemistry, 77(1): 415-441 [本文引用:1]
[24]
Knecht DA, Cohen SM, Loomis WF, Lodish HF, 1986. Developmental regulation of Dictyostelium discoideum actin gene fusions carried on low-copy and high-copy transformation vectors. Molecular and Cellular Biology, 6(11): 3973-3983 [本文引用:1]
[25]
Lahr DJG, Grant J, Nguyen T, Lin JH, Katz LA, 2011. Comprehensive phylogenetic reconstruction of amoebozoa based on concatenated analyses of SSU-rDNA and actin genes. PLoS One, 6(7): e22780 [本文引用:1]
[26]
Loewy AG, 1952. An actomyosin-like substance from the plasmodium of a myxomycete. Journal of Cellular and Comparative Physiology, 40(1): 127-156 [本文引用:1]
[27]
Niu TS, Liu XW, Li X, Ru Y, Wang QH, Zhang J, 2013. Bioinformatic prediction and experimental validation of NDRG2 interaction partners. Chinese Journal of Biochemistry and Molecular Biology, 29(2): 168-174 (in Chinese) [本文引用:1]
[28]
Perry SV, 2003. When was actin first extracted from muscle?Journal of Muscle Research and Cell Motility, 24(8): 597-599 [本文引用:1]
[29]
Raper KB, Rahn AW, 1984. The dictyostelids. Books on Demand . University Press, Princeton. 1-466 [本文引用:1]
[30]
Rehmany AP, Gordon A, Rose LE, Allen RL, Armstrong MR, Whisson SC, Kamoun S, Tyler BM, Birch PRJ, Beynon JL, 2005. Differential recognition of highly divergent downy mildew avirulence gene alleles by RPP1 resistance genes from two Arabidopsis lines. The Plant Cell Online, 17(6): 1839-1850 [本文引用:2]
[31]
Spudich JA, Lord WttaoK, 1974. Biochemical and structural studies of actomyosin-like proteins from non-muscle cells: II. Purification, properties, and membrane association of actin from amoebae of Dictyostelium discoideum. Journal of Biological Chemistry, 249(18): 6013-6020 [本文引用:1]
[32]
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S, 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 36(5): 1-24 [本文引用:1]
[33]
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG, 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 25(24): 4876-4882 [本文引用:1]
[34]
Tian L, Chen JY, Chen XY, Wang JN, Dai XF, 2011. Prediction and analysis of Verticillium dahliae VdLs. 17 secretome. Scientia Agricultura Sinica, 44(15): 3142-3153 (in Chinese) [本文引用:1]
[35]
Tyler BM, Tripathy S, Zhang X, Dehal P, Jiang RHY, Aerts A, Arredondo FD, Baxter L, Bensasson D, Beynon JL, Chapman J, Damasceno CMB, Dorrance AE, Dou D, Dickerman AW, Dubchak IL, Garbelotto M, Gijzen M, Gordon SG, Govers F, Grunwald NJ, Huang W, Ivors KL, Jones RW, Kamoun S, Krampis K, Lamour KH, Lee M-K, McDonald WH, Medina M, Meijer HJG, Nordberg EK, Maclean DJ, Ospina-Giraldo MD, Morris PF, Phuntumart V, Putnam NH, Rash S, Rose JKC, Sakihama Y, Salamov AA, Savidor A, Scheuring CF, Smith BM, Sobral BWS, Terry A, Torto-Alalibo TA, Win J, Xu Z, Zhang H, Grigoriev IV, Rokhsar DS, Boore JL, 2006. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science, 313(5791): 1261-1266 [本文引用:1]
[36]
Uyemura DG, Brown SS, Spudich JA, 1978. Biochemical and structural characterization of actin from Dictyostelium discoideum. Journal of Biological Chemistry, 253(24): 9088-9096 [本文引用:1]
[37]
Veltman DM, King JS, Machesky LM, Insall RH, 2012. SCAR knockouts in Dictyostelium: WASP assumes SCAR’s position and upstream regulators in pseudopods. The Journal of Cell Biology, 198(4): 501-508 [本文引用:3]
[38]
Vicker MG, 2002. F-actin assembly in Dictyostelium cell locomotion and shape oscillations propagates as a self-organized reaction-diffusion wave. FEBS Letters, 510(1-2): 5-9 [本文引用:1]
[39]
Wang C, Marshall A, Zhang D, Wilson ZA, 2012. ANAP: an integrated knowledge base for Arabidopsis protein interaction network analysis. Plant Physiology, 158(4): 1523-1533 (in Chinese) [本文引用:1]
[40]
Yu QL, Ma L, Liu L, Yang J, Su Y, Wang YY, Zhu YY, Li CY, 2008. Primary analysis of host-targeting-motif harbored secreted proteins in genome of Fusarium graminearum. Biotechnology Bulletin, 1: 160-165+180 (in Chinese) [本文引用:1]
[41]
Zhu L, Xu J, Zhang DB, 2012. Molecular evolution, expression and functional network prediction analysis of ABC transporter gene family in Arabidopsis thaliana. Plant Physiology Journal, 48(12): 1151-1166 (in Chinese) [本文引用:1]