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Quality of DNA extracted from saliva samples collected with the Oragene? DNA self-collection kit

DOI: 10.1186/1471-2288-12-65

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Abstract:

Saliva samples were collected with an OrageneTM DNA Self-Collection Kit from 4,110 subjects aged 14–15?years. The samples were processed in two aliquots with an 8-month interval between them. Quantitative and qualitative evaluations were carried out in 20% of the samples by spectrophotometry and genotyping. Descriptive analyses and paired t-tests were performed.The mean volume of saliva collected was 2.2?mL per subject, yielding on average 184.8?μg DNA per kit. Most samples showed a Ratio of OD differences (RAT) between 1.6 and 1.8 in the qualitative evaluation. The evaluation of DNA quality by TaqMan?, High Resolution Melting (HRM), and restriction fragment length polymorphism-PCR (RFLP-PCR) showed a rate of success of up to 98% of the samples. The sample store time did not reduce either the quantity or quality of DNA extracted with the Oragene kit.The study results showed that a storage period of 8?months at room temperature did not reduce the quality of the DNA obtained. In addition, the use of the Oragene kit during fieldwork in large population-based studies allows for DNA of high quantity and high quality.

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