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Sequence and Expression Analysis of Cytoplasmic Copper/zinc Superoxide Dismutase Gene in Rice
水稻细胞质铜锌超氧化物歧化酶基因的序列和表达分析

Keywords: RT-PCR
水稻
,铜锌超氧化物歧化酶,序列分析,基因组结构

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Abstract:

The 698 bp cytoplasmic copper/zinc-superoxide dismutase gene (OsCu/Zn-SOD) was cloned by RT-PCR from young panicles of rice Cpslo17, a wide-compatible rice cultivar (Oryza sativa). DNA sequence analysis indicated that the gene consisted of a full-open reading frame and encoded a protein of 152 amino acid residues. The nucleatide sequence of OsCu/Zn-SOD shares 88% identity to maize Cu/Zn-SOD. No signal peptide was predicted by TargetP and ChloroP. Further analysis of encoding segment of OsCu/Zn-SOD revealed that it contained 8 exons and 7 introns. The putative three-dimensional structure of OsCu/Zn-SOD was predicted by the Swiss-Model server and Cu2 and Zn2 binding sites of OsCu/Zn-SOD were analyzed. RT-PCR results showed differential expression of OsCu/Zn-SOD in leaves of both japnica and indica rice. OsCu/Zn-SOD was expressed highly in panicles during young ear and the flowering stages or in immature seeds, however less in leaves and faintly in callus.

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