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Genetics Selection Evolution

ISSN Print: 1297-9686

ISSN Online:

Website: http://www.gsejournal.org

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Correction: Ancient DNA studies: new perspectives on old samples

Ermanno Rizzi, Martina Lari, Elena Gigli, Gianluca De Bellis, David Caramelli

Methods to estimate effective population size usingpedigree data: Examples in dog, sheep, cattle andhorse

Grégoire Leroy, Tristan Mary-Huard, Etienne Verrier, Sophie Danvy, Eleonore Charvolin, Coralie Danchin-Burge

Mitochondrial DNA and Y-chromosomal diversity in ancient populations of domestic sheep (Ovis aries) in Finland: comparison with contemporary sheep breeds

Marianna Niemi, Auli Bl？uer, Terhi Iso-Touru, Veronica Nystr？m, Janne Harjula, Jussi-Pekka Taavitsainen, Jan Stor？, Kerstin Lidén, Juha Kantanen

Imputation of high-density genotypes in theFleckvieh cattle population

Hubert Pausch, Bernhard Aigner, Reiner Emmerling, Christian Edel, Kay-Uwe G？tz, Ruedi Fries

Assessment of alternative genotyping strategies to maximize imputation accuracy at minimal cost

Yijian Huang, John M Hickey, Matthew A Cleveland, Christian Maltecca

Genetic diversity and networks of exchange: a combined approach to assess intra-breed diversity

Jean-Fran？ois Dumasy, Christel Daniaux, Isabelle Donnay, Philippe V Baret

Strategies for implementing genomic selection in family-based aquaculture breeding schemes: double haploid sib test populations

Kahsay G Nirea, Anna K Sonesson, John A Woolliams, Theo HE Meuwissen

Estimation of (co)variances for genomic regions of flexible sizes: application to complex infectious udder diseases in dairy cattle

Lars P S？rensen, Luc Janss, Per Madsen, Thomas Mark, Mogens S Lund

Genomic selection requires genomic control of inbreeding

Anna K Sonesson, John A Woolliams, Theo HE Meuwissen

Estimating the effect of SNP genotype on quantitative traits from pooled DNA samples

John M Henshall, Rachel J Hawken, Sonja Dominik, William Barendse

Long-term response to genomic selection: effects of estimation method and reference population structure for different genetic architectures

John WM Bastiaansen, Albart Coster, Mario PL Calus, Johan AM van Arendonk, Henk Bovenhuis

An accurate formula to calculate exclusion power of marker sets in parentage assignment

Marc Vandeputte

Differential mRNA expression of seven genes involved in cholesterol metabolism and transport in the liver of atherosclerosis-susceptible and -resistant Japanese quail strains

Xinrui Li, Patricia Schulte, David V Godin, Kimberly M Cheng

Response to genomic selection: The Bulmer effect and the potential of genomic selection when the number of phenotypic records is limiting

Elizabeth M Van Grevenhof, Johan AM Van Arendonk, Piter Bijma

Comparison on genomic predictions using three GBLUP methods and two single-step blending methods in the Nordic Holstein population

Hongding Gao, Ole F Christensen, Per Madsen, Ulrik S Nielsen, Yuan Zhang, Mogens S Lund, Guosheng Su

Evaluating alternate models to estimate genetic parameters of calving traits in United Kingdom Holstein-Friesian dairy cattle

Sophie A E Eaglen, Mike P Coffey, John A Woolliams, Eileen Wall

The genetic parameters of feed efficiency and its component traits in the turkey (Meleagris gallopavo)

Lindsay A Case, Benjamin J Wood, Stephen P Miller

Statistical distributions of test statistics used for quantitative trait association mapping in structured populations

Simon Teyssèdre, Jean-Michel Elsen, Anne Ricard

Prediction of a deletion copy number variant by a dense SNP panel

Naveen K Kadri, Patrick D Koks, Theo H E Meuwissen

Fine mapping of a QTL for ear size on porcine chromosome 5 and identification of high mobility group AT-hook 2 (HMGA2) as a positional candidate gene

Pinghua Li, Shijun Xiao, Na Wei, Zhiyan Zhang, Ruihua Huang, Yueqing Gu, Yuanmei Guo, Jun Ren, Lusheng Huang, Congying Chen

Heritability of cortisol response to confinement stress in European sea bass dicentrarchus labrax

Filip AM Volckaert, Bart Hellemans, Costas Batargias, Bruno Louro, Cécile Massault, Jeroen KJ Van Houdt, Chris Haley, Dirk-Jan de Koning, Adelino VM Canario

Compatibility of pedigree-based and marker-based relationship matrices for single-step genetic evaluation

Ole F Christensen

Optimum contribution selection for conserved populations with historic migration

Robin Wellmann, Sonja Hartwig, J？rn Bennewitz

Genetic evaluation of mastitis liability and recovery through longitudinal analysis of transition probabilities

Jessica Franzén, Daniel Thorburn, Jorge I Urioste, Erling Strandberg

Ancient DNA studies: new perspectives on old samples

Ermanno Rizzi, Martina Lari, Elena Gigli, Gianluca De Bellis, David Caramelli

A phasing and imputation method for pedigreed populations that results in a single-stage genomic evaluation

John M Hickey, Brian P Kinghorn, Bruce Tier, Julius HJ van der Werf, Matthew A Cleveland

Modelling and estimation of genotype by environment interactions for production traits in French dairy cattle

Bérénice Huquet, Hélène Leclerc, Vincent Ducrocq

Optimising multistage dairy cattle breeding schemes including genomic selection using decorrelated or optimum selection indices

Vinzent B？rner, Norbert Reinsch

Effectiveness of genomic prediction on milk flow traits in dairy cattle

Kent A Gray, Joseph P Cassady, Yijian Huang, Christian Maltecca

Parallel Markov chain Monte Carlo - bridging the gap to high-performance Bayesian computation in animal breeding and genetics

Xiao-Lin Wu, Chuanyu Sun, Timothy M Beissinger, Guilherme JM Rosa, Kent A Weigel, Natalia de Gatti, Daniel Gianola

Genetic diversity, population structure and subdivision of local Balkan pig breeds in Austria, Croatia, Serbia and Bosnia-Herzegovina and its practical value in conservation programs

Thomas Druml, Kresimir Salajpal, Maria Dikic, Miroslav Urosevic, Gertrud Grilz-Seger, Roswitha Baumung

Accuracy of pedigree and genomic predictions of carcass and novel meat quality traits in multi-breed sheep data assessed by cross-validation

Hans D Daetwyler, Andrew A Swan, Julius HJ van der Werf, Ben J Hayes

Simulating a base population in honey bee for molecular genetic studies

Pooja Gupta, Tim Conrad, Andreas Sp？tter, Norbert Reinsch, Kaspar Bienefeld

The importance of information on relatives for the prediction of genomic breeding values and the implications for the makeup of reference data sets in livestock breeding schemes

Samuel A Clark, John M Hickey, Hans D Daetwyler, Julius HJ van der Werf

The importance of identity-by-state information for the accuracy of genomic selection

Tu Luan, John A Woolliams, J？rgen ？deg？rd, Marlies Dolezal, Sergio I Roman-Ponce, Alessandro Bagnato, Theo HE Meuwissen

Genetic and environmental heterogeneity of residual variance of weight traits in Nellore beef cattle

Haroldo HR Neves, Roberto Carvalheiro, Sandra A Queiroz

Genome-wide association study of insect bite hypersensitivity in two horse populations in the Netherlands

Anouk Schurink, Anna Wolc, Bart J Ducro, Klaas Frankena, Dorian J Garrick, Jack CM Dekkers, Johan AM van Arendonk

Inclusion of cow records in genomic evaluations and impact on bias due to preferential treatment

Romain Dassonneville, Aurelia Baur, Sébastien Fritz, Didier Boichard, Vincent Ducrocq

Joint genomic evaluation of French dairy cattle breeds using multiple-trait models

Sofiene Karoui, María Jesús Caraba？o, Clara Díaz, Andrés Legarra

Association between polymorphism in the FTO gene and growth and carcass traits in pig crosses

Věra Dvo？áková, Heinz Bartenschlager, Antonín Stratil, Pavel Horák, Roman Stupka, Jaroslav ？ítek, Michal ？prysl, Anna Hrdlicová, Hermann Geldermann

Effect of non-random mating on genomic and BLUP selection schemes

Kahsay G Nirea, Anna K Sonesson, John A Woolliams, Theo HE Meuwissen

Genetic parameters of infectious bovine keratoconjunctivitis and its relationship with weight and parasite infestations in Australian tropical Bos taurus cattle

Abdirahman A Ali, Christopher J O’Neill, Peter C Thomson, Haja N Kadarmideen

Accuracy of direct genomic breeding values for nationally evaluated traits in US Limousin and Simmental beef cattle

Mahdi Saatchi, Robert D Schnabel, Megan M Rolf, Jeremy F Taylor, Dorian J Garrick

Estimation of heritability from limited family data using genome-wide identity-by-descent sharing

J？rgen ？deg？rd, Theo HE Meuwissen

Inferring causal phenotype networks using structural equation models

Guilherme JM Rosa, Bruno D Valente, Gustavo de los Campos, Xiao-Lin Wu, Daniel Gianola, Martinho A Silva

New investigations around CYP11A1 and its possible involvement in an androstenone QTL characterised in Large White pigs

Annie Robic, Guillaume Le Mignon, Katia Fève, Catherine Larzul, Juliette Riquet

Searching for phenotypic causal networks involving complex traits: an application to European quail

Bruno D Valente, Guilherme JM Rosa, Martinho A Silva, Rafael B Teixeira, Robledo A Torres

Quantitative genetics of taura syndrome resistance in pacific white shrimp (penaeus vannamei): a cure model approach

J？rgen ？deg？rd, Thomas Gitterle, Per Madsen, Theo HE Meuwissen, M Hossein Yazdi, Bjarne Gjerde, Carlos Pulgarin, Morten Rye

Association between plasma metabolites and gene expression profiles in five porcine endocrine tissues

Bin Yang, Anna Bassols, Yolanda Saco, Miguel Pérez-Enciso

Genomic evaluations with many more genotypes

Paul M VanRaden,, Jeffrey R O'Connell,, George R Wiggans, Kent A Weigel

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