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ISSN: 2333-9721
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Quantitative Biology

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主页: http://arxiv.org/archive/q-bio

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Kinetic Accessibility of Buried DNA Sites in Nucleosomes

Wolfram Mobius,Richard A. Neher,Ulrich Gerland

Testing the transition state theory in stochastic dynamics of a genetic switch

Tomohiro Ushikubo,Wataru Inoue,Mitsumasa Yoda,Masaki Sasai

Nearest neighbour spacing distribution of basis in some intron-less and intron-containing DNA sequences

M. F. Higareda,H. Hernández-Salda？a,R. A. Méndez-Sánchez

Invertibility of the TKF model of sequence evolution

Bhalchandra D. Thatte

The synchronization of stochastic oscillators

Amitabha Nandi,G. Santhosh,R. K. Brojen Singh,Ram Ramaswamy

Theory of Interaction of Memory Patterns in Layered Associative Networks

Kazuya Ishibashi,Kosuke Hamaguchi,Masato Okada

Chaotic itinerancy, temporal segmentation and spatio-temporal combinatorial codes

Juliana R. Dias,Rodrigo F. Oliveira,Osame Kinouchi

Spatial embedding of neuronal trees modeled by diffusive growth

Artur Luczak

A new stimulus approach in the search for biological nonlocality

Fred H. Thaheld

Neural integrator - a sandpile model

Maxim Nikitchenko,Alexei Koulakov

Different Strategies for Cancer Treatment: Mathematical Modeling

O. G. Isaeva,V. A. Osipov

When does division of labor lead to increased system output?

Emmanuel Tannenbaum

Methods of robustness analysis for Boolean models of gene control networks

Madalena Chaves,Eduardo D. Sontag,Reka Albert

Episodic synchronization in dynamically driven neurons

Pablo Balenzuela,Javier M. Buldu,Marcos Casanova,Jordi Garcia-Ojalvo

Thriving at high hydrostatic pressure: the example of ammonoids (extinct cephalopods)

Fabio Vittorio De Blasio

A model of hyphal tip growth involving microtubule-based transport

K. E. P. Sugden,M. R. Evans,W. C. K. Poon,N. D. Read

Stochastic Model of Yeast Cell Cycle Network

Yuping Zhang,Minping Qian,Qi Ouyang,Minghua Deng,Fangting Li,Chao Tang

Microarray Data Management. An Enterprise Information Approach: Implementations and Challenges

Willy Valdivia-Granda,Christopher Dwan

Superstability of the yeast cell cycle dynamics: Ensuring causality in the presence of biochemical stochasticity

Stefan Braunewell,Stefan Bornholdt

Gene Function Classification Using Bayesian Models with Hierarchy-Based Priors

Babak Shahbaba,Radford M. Neal

Impact of observational incompleteness on the structural properties of protein interaction networks

Mathias Kuhnt,Ingmar Glauche,Martin Greiner

Aging cellular networks: chaperones as major participants

Csaba Soti,Peter Csermely

Towards Classification of Phase Transitions in Reaction--Diffusion Models

Vlad Elgart,Alex Kamenev

Sequential recruitment and combinatorial assembling of multiprotein complexes in transcriptional activation

Vincent Lemaire,Chiu Fan Lee,Jinzhi Lei,Raphael Metivier,Leon Glass

Conductance versus current noise in a neuronal model for noisy subthreshold oscillations and related spike generation

Martin Tobias Huber,Hans Albert Braun

Graph Theory and Networks in Biology

Oliver Mason,Mark Verwoerd

Hierarchical modularity of nested bow-ties in metabolic networks

Jing Zhao,Hong Yu,Jian-Hua Luo,Zhi-Wei Cao,Yi-Xue Li

Qualitative Assessment of Gene Expression in Affymetrix Genechip Arrays

Radhakrishnan Nagarajan,Meenakshi Upreti

Effects of Growth on Dinitrogen on the Transcriptome and Predicted Proteome of Nostoc PCC 7120

R. Wunschiers,R. Axelsson,P. Lindblad

Self-energy limited ion transport in sub-nanometer channels

Douwe Jan Bonthuis,Jingshan Zhang,Breton Hornblower,Jerome Mathe,Boris I. Shklovskii,Amit Meller

Ab initio simulations of Cu binding sites in the N-terminal region of PrP

S. Furlan,G. La Penna,F. Guerrieri,S. Morante,G. C. Rossi

Parametrization of the Hybrid Potential for Pairs of Neutral Atoms

Kevin Cahill

Simple solvation potential for coarse-grained models of proteins

A. Bhattacharyay,A. Trovato,F. Seno

Triangular lattice neurons may implement an advanced numeral system to precisely encode rat position over large ranges

Yoram Burak,Ted Brookings,Ila Fiete

Mean Field Model of Genetic Regulatory Networks

M. Andrecut,S. A. Kauffman

Conservation rules, their breakdown, and optimality in Caenorhabditis sinusoidal locomotion

Jan Karbowski,Christopher J. Cronin,Adeline Seah,Jane E. Mendel,Daniel Cleary,Paul W. Sternberg

Evolution of Protein Interaction Networks by Whole Genome Duplication and Domain Shuffling

K. Evlampiev,H. Isambert

Is the intrinsic disorder of proteins the cause of the scale-free architecture of protein-protein interaction networks?

Santiago Schnell,Santo Fortunato,Sourav Roy

Frequency and Viability of Diploid and Haploid Males Offsprings of Mated Females of Solitary Endoparasitoid (DIADROMUS Pulchellus) (Ichneumonidae)

Robert Kalmès,Danielle Rojas-Rousse

Extinction in genetic bit-string model with sexual recombination

D. Stauffer,S. Cebrat

Evolution of the most recent common ancestor of a population with no selection

Damien Simon,Bernard Derrida

A Chemical Kinetic Model of Transcriptional Elongation

Yujiro Richard Yamada,Charles S. Peskin

Diffusion and interfaces in pattern formation

Ovidiu Radulescu,Sergei Vakulenko

Synchronization in Electrically Coupled Neural Networks

Rajesh G Kavasseri,Radhakrishnan Nagarajan

Amplified biochemical oscillations in cellular systems

A. J. McKane,J. D. Nagy,T. J. Newman,M. O. Stefanini

Dynamics of Semiflexible Polymers in a Flow Field

Tobias Munk,Oskar Hallatschek,Chris H. Wiggins,Erwin Frey

Biochemical analysis of human breast tissues using FT-Raman spectroscopy

Renata Andrade Bitar,Herculano da Silva Martinho,Carlos Julio Tierra Criollo,Leandra Naira Zambelli Ramalho,Mario Mourao Netto,Airton Abrahao Martin

Preservation of information in a prebiotic package model

Daniel A. M. M. Silvestre,Jose F. Fontanari

Cyclical interactions with alliance-specific heterogeneous invasion rates

Matjaz Perc,Attila Szolnoki,Gyorgy Szabo

A number theoretical observation about the degeneracy of the genetic code

Andrei Khrennikov,Marcus Nilsson

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