全部 标题 作者
关键词 摘要

OALib Journal期刊
ISSN: 2333-9721
费用:99美元

查看量下载量

相关文章

更多...

Morphological, Pathological, Biochemical and Molecular Characterization of Ralstonia solanacearum Isolates in Bangladesh

DOI: 10.4236/ajmb.2021.114012, PP. 142-164

Keywords: Brown Rot of Potato, Latent Infection, Ralstonia solanacearum, Biovar, Race

Full-Text   Cite this paper   Add to My Lib

Abstract:

One thirty samples (fifty-five potato tubers, twenty-seven potato stems, three chili stems, twenty-eight soil samples, five weed samples, three banana leaves, and nine water samples) were examined and one hundred six (106) Bangladeshi isolates of Ralstonia solanacearum were isolated and identified. Isolation was made on selective media (Tetrazolium chloride media) and R. solanacearum was identified based on morphological, pathological and biochemical properties and polymerase chain reaction (PCR) by using the species-specific primers. Studies showed that 81.54% (106) samples were positive on tetrazolium chloride solid medium. Among them 90 isolates were virulent and rest of them were avirulent. Fifty isolates were selected for chemical characterization based on hypersensitivity test. R. solanacearum is gram negative, aerobic facultative bacteria on the basis of chemical characterization. Fifty tested isolates expressed as race 3 while in biovar test forty-eight showed as biovar III and the rest two showed as biovar I. In nine tested isolates from the three districts a species-specific band of 280 bp was amplified in PCR that confirmed the identity of R. solanacerum.

References

[1]  Smith, E.F. (1896) A Bacterial Disease of the Tomato, Eggplant, and Irish Potato (Bacillus solanacearum nov. sp.). Bulletin No. 12, US Department of Agriculture, Division of Vegetable Physiology and Pathology, Washington DC, 1-28.
[2]  Yabuuchi, E., Kosako, Y., Yano, I., Hotta, H. and Nishiuchi, Y. (1995) Transfer of Two Burkholderia and an Alcaligenes Species to Ralstonia Gen. Nov. Microbiology and Immunology, 39, 897-904.
https://doi.org/10.1111/j.1348-0421.1995.tb03275.x
[3]  DAE (Department of Agriculture Extension) (2015) Agricultural Statistics. Ministry of Agriculture, Kharmarbari, Farmgate, Dhaka.
[4]  Taiwo, L.B., Adebayo, D.T., Adebayo, O.S. and Adediran, J.A. (2007) Compost and Glomus mosseae on Management of Bacterial and Fusarium Wilts of Tomato. International Journal of Vegetable Science, 13, 49-61.
https://doi.org/10.1300/J512v13n02_05
[5]  Yuliar, Nion, Y.A. and Toyota, K. (2015) Recent Trends in Control Methods for Bacterial Wilt Diseases Caused by Ralstonia solanacearum. Microbes and Environments, 30, 1-11.
https://doi.org/10.1264/jsme2.ME14144
https://www.jstage.jst.go.jp/browse/jsm
[6]  Safni, I., Cleenwerck, I., De, Vos, P., Fegan, M., Sly, L. and Kappler, U. (2014) Polyphasic Taxonomic Revision of the Ralstonia solanacearum Species Complex: Proposal to Emend the Descriptions of Ralstonia solanacearum and Ralstonia syzygii and Reclassify Current R. syzygii Strains as Ralstonia syzygii Subsp. Syzygii Subsp. November, R. solanacearum Phylotype IV Strains as Ralstonia syzygii Subsp. Indonesiensis Subsp. November, Banana Blood Disease Bacterium Strains as Ralstonia syzygii Subsp. Celebesensis Subsp. November and R. solanacearum Phylotype I and III Strains as Ralstonia pseudosolanacearum sp. Nov. International Journal of Systematicand Evolutionary Microbiology, 64, 3087-3103.
https://doi.org/10.1099/ijs.0.066712-0
[7]  Denny, T.P. (2006) Plant Pathogenic Rastonia Species. In: Gnanamanickam, S.S., Ed., Plant-Associated Bacterial, Springer Publishing, Dordrecht, 573-644.
https://doi.org/10.1007/978-1-4020-4538-7_16
[8]  Hayward, A.C. (1991) Biology and Epidemiology of Bacterial Wilt Caused by Pseudomonas solanacearum. Annual Review of Phytopathology, 29, 65-87.
https://doi.org/10.1146/annurev.py.29.090191.000433
[9]  CABI (Center for Agriculture and Bioscience International) (2017) Phytophthora Infestans (Phytophthora Blight).
https://www.cabi.org/isc/datasheet/40970
[10]  Champoiseau, P.G., Jones, J.B. and Allen, C. (2009) Ralstonia solanacearum Race 3 Biovar 2 Causes Tropical Losses and Temperate Anxieties. Plant Health Progress, 10, 1-10.
https://doi.org/10.1094/PHP-2009-0313-01-RV
[11]  Johnson, S.B. (2003) Bacterial wilt. Spudlines, 41, 1.
[12]  Lemay, A., Redlin, S., Fowler, G. and Dirani, M. (2003) Pest Dana Sheet: Ralstonia Solanacearum Race 3 Biovar 2.
https://plantpath.ifas.ufl.edu/rsol/RalstoniaPublications_PDF/USDARalstoniaPestDataSheet_2003.pdf
[13]  Charkowski, A., Sharma, K., Parker, M.L., Secor, G.A. and Elphinstone, J. (2020) Chapter 10: Bacterial Diseases of Potato. In: Campos, H. and Ortiz, O., Eds., The Potato Crop: Its Agricultural, Nutritional and Social Contribution to Humankind, Springer, Cham, 351-388.
https://doi.org/10.1007/978-3-030-28683-5_10
[14]  Champoiseau, G. (2008) Ralstonia Solanacearum Race 3 Biovar 2: Detection, Exclusion and Analysis of a Select Agent Educational Modules. The United States Department of Agriculture, National Research Initiative Program (2007-2010), pp. 1-17.
https://plantpath.ifas.ufl.edu/rsol/RalstoniaPublications_PDF/RsolanacearumR3b2_PDF.pdf.
[15]  Sullivan, M., Daniells, E., Southwick, C. and Mackesy, D. (2013) CPHST (Center for Plant Health Science and Technology) Pest Datasheet for Ralstonia solanacearum Race 3 Biovar 2. USDA–APHIS–PPQ–Center for Plant Health Science and Technology Plant Epidemiology and Risk Analysis Laboratory, Raleigh.
[16]  Pest Risk Analysis (2015) Pest Risk Analysis (PRA) of Potato in Bangladesh. Government of the People’s Republic of Bangladesh, Ministry of Agriculture, Office of the Project Director Strengthening Phytosanitary Capasity in Bangladesh Project Plant Quarantine Wing Department of Agriculture Extension Khamarbari, Farmgate, Dhaka; Development Technical Consultants Pvt. Ltd., Dhaka, 1-124.
[17]  Nishat, S., Hamim, I., Khalil, M.I., Ali, M.A., Hossain, M.A., Meah, M.B. and Islam, M.R. (2015) Genetic Diversity of The Bacterial Wilt Pathogen Ralstonia solanacearum Using a RAPD Marker. Comptes Rendus Biologies, 338, 757-767.
https://doi.org/10.1016/j.crvi.2015.06.009
[18]  Ahmed, N.N., Islam, M.R., Hossain, M.A., Meah, M.B. and Hossain, M.M. (2013) Determination of Races and Biovars of Ralstonia solanacearum Causing Bacterial Wilt Disease of Potato. Journal of Agricultural Science, 5, 86-93.
https://doi.org/10.5539/jas.v5n6p86
[19]  Karim, Z. (2017) Study on Phenotypic Conversion, Virulence and Biovar Expression of Ralstonia solanacearum Causing Potato Wilt and its Management. A Ph.D. Dissertation, Department of Plant Pathology Sher-e-Bangla Agricultural University (SAU), Dhaka, 1-216.
[20]  Champoiseau, P.G., Jones, J.B., Momol, T.M., Ji, P., Norman, D.J., Miller, S.A., Schubert, T., Bell, D., Floyd, J.P., Kaplan, D. and Bulluck, R. (2010) Recovery Plan for Ralstonia solanacearum Race 3 Biovar 2: Causing Brown Rot of Potato, Bacterial Wilt of Tomato, and Southern Wilt of Geranium.
https://www.ars.usda.gov/ARSUserFiles/00000000/opmp/RalstoniaR3b2May2010.pdf
[21]  Danks, C. and Barker, I. (2000) On-Site Detection of Plant Pathogens Using Lateral Flow Devices. EPPO Bulletin, 30, 421-426.
https://doi.org/10.1111/j.1365-2338.2000.tb00922.x
[22]  Kinyua, Z.M., Miller, S.A., Chin, M.A. and Subedi, M.N. (2014) Bacterial Wilt Disease Ralstonia solanacearum. Standard Operating Procedure for Use in Diagnostic Laboratories. Version: EA-SOP-RS1. International Plant Diagnostic Network, 1-24.
https://ipmil.cired.vt.edu/wp-content/uploads/2014/06/SOP-Ralstonia-solanacerum-EastAfricaFinal-Apr2014-2.pdf
[23]  Elphinstone, J.G., Hennessey, J.K., Wilson, J.K. and Stead, D.E. (1996) Sensitivity of Different Methods for the Detection of Pseudomonas solanacearum in Potato Tuber Extracts. EPPO Bulletin, 26, 663-678.
https://doi.org/10.1111/j.1365-2338.1996.tb01511.x
[24]  Kelman, A. (1954) The Relationship of Pathogenicity in Pseudomonas solanacearum to Colony Appearance on a Tetrazolium Medium. Phytopathology, 44, 693-695.
[25]  Goszczynska, T., Serfontein, J.J. and Serfontein, S. (2000) Introduction to Practical Phytobacteriology. ARC-Plant Protection Research Institute, Pretoria.
[26]  Aminuzzaman, F.M., Hossain, I. and Ahmed, F. (2010) Cultural Variation and Pathogenicity of Bipolaris sorokiniana on Wheat in Bangladesh. International Journal of Agriculture, Environment and Biotechnology, 3, 93-98.
[27]  Janse, J.D. (1991) Infra- and Intraspecific Classification of Pseudomonas solanacearum Strains, Using Whole Cell Fatty Acid Analysis. Systematic and Applied Microbiology, 14, 335-345.
https://doi.org/10.1016/S0723-2020(11)80307-3
[28]  Klement, Z., Farkas, G.L. and Lovrekovich, L. (1964) Hypersensitive Reaction Induced by Phytopathogenic Bacteria in the Tobacco Leaf. Phytopathology, 54, 474-477.
[29]  Schaad, N.W. (1980) Laboratory Guide for the Identification of Plant Pathogenic Bacteria. American Phytopathological Society, Saint Paul, 28-45.
[30]  Suslow, T.V., Schroth, M.N. and Isaka, M.H. (1982) Application of Rapid Method for Gram Differentiation of Plant Pathogenic and Saprophytic Bacteria without Staining. Phytopathology, 72, 917-918.
https://doi.org/10.1094/Phyto-72-917
[31]  Hayward, A.C. (1964) Characteristics of Pseudomonas solanacearum. Journal of Applied Bacteriology, 27, 265-277.
https://doi.org/10.1111/j.1365-2672.1964.tb04912.x
[32]  Janse, J.D. (1953) Phytobacteriology: Principles and Practice. CABI Publishing, Wageningen, Netherlands.
https://www.cabi.org
[33]  Opina, N., Tavner, F., Holloway, G., Wang, J.F., Li, T.H., Maghirang, R., Fegan, M., Hayward, A.C., Krishnapillai, V., Hong, W.F., Holloway, B.W. and Timmis, J.N. (1997) A Novel Method for Development of Species and Strain-Specific DNA Probes and PCR Primers for Identifying Burkholderia solanacearum (Formerly Pseudomonas solanacearum). Asia-Pacific Journal of Molecular Biology and Biotechnology, 5, 19-30.
[34]  Doughty, C.J. (2003) Instructed SLA: Constraints, Compensation, and Enhancement. In: Doughty, C.J., Long, M.H. (Eds). The Handbook of Second Language Acquisition, Blackwell Publishing Ltd., Malden, 256-310.
https://doi.org/10.1002/9780470756492.ch10
[35]  Denny, T.P. and Hayward, A.C. (2001) Ralstonia solanacearum. In: Schaad, N.W., Jones, J.B. and Chun, W., Eds., Laboratory Guide for Identification of Plant Pathogenic Bacteria, 3rd Edition, APS Press, Saint Paul, 151-173.
[36]  EPPO (European Plant Protection Organization) (2004) Ralstonia solanacearum. EPPO Bulletin, 34, 173-178.
https://doi.org/10.1111/j.1365-2338.2004.00715.x
[37]  Kumar, S., Kedarnath, Hamsaveni, N., Gowda, P.H.R., Rohini, I.B., Rangaswamy, K.T. and Achari, R. (2017) Isolation and Characterization of Ralstonia solanacearum Causing Bacterial Wilt of Solanaceae Crops. International Journal of Current Microbiology and Applied Science, 6, 1173-1190.
https://doi.org/10.20546/ijcmas.2017.605.128
[38]  Singh, D., Yadav, D.K., Sinha, S., Choudhary, G. (2014) Effect of Temperature, Cultivars, Injury of Root and Inoculums Load of Ralstonia solanacearum to Cause Bacterial Wilt of Tomato. Achieves of Phytopathology and Plant Protection, 47, 1574-1583.
https://doi.org/10.1080/03235408.2013.851332
[39]  Winstead, N. and Kelman, A. (1952) Inoculation Techniques for Evaluating Resistance to Pseudomonas solanacearum. Phytopathology, 42, 628-634.
[40]  He, L.Y., Sequeira, L. and Kelman, A. (1983) Characteristics of Strains of Pseudomonas solanacearum from China. Plant Disease, 67, 1357-1361.
https://doi.org/10.1094/PD-67-1357
[41]  Schaad, N.W., Jones, J.B. and Chun, W. (2001) Laboratory Guide for the Identification of Plant Pathogenic Bacteria. 3rd Edition, American Phytopathological Society, Saint Paul, 1-39.
[42]  Elphinstone, J.G. (2005) The Current Bacterial Wilt Situation: A Global Overview. In: Allen, C., Prior, P. and Hayward, A.C., Eds., Bacterial Wilt: the Disease and the Ralstonia solanacearum Species Complex, American Phytopathological Society Press, Saint Paul, 9-28.
[43]  Van Elsas, J.D., Kastelein, P, van Bekkum, P., van der Wolf, J.M., de Vries, P.M. and van Overbeek, L.S. (2000) Survival of Ralstonia solanacearum Biovar 2, the Causative Agent of Potato Brown Rot, in Field and Microcosm Soils in Temperate Climates. Phytopathology, 90, 1358-1366.
https://doi.org/10.1094/PHYTO.2000.90.12.1358
[44]  Shekhawat, G.S., Chakrabarti, S.K. and Gadewar, A.V. (1992) Potato Bacterial Wilt in India. Indian Council of Agricultural Research, India. Technical Bulletin, 38, 16-39.
[45]  Swanson, J.K., Yao, J., Tans-Kersten, J. and Allen, C. (2005) Behavior of Ralstonia solanacearum Race 3 Biovar 2 during Latent and Active Infection of Geranium. Phytopathology, 95, 136-143.
https://doi.org/10.1094/PHYTO-95-0136
[46]  Kelman, A. (1998) One Hundred and One Years of Research on Bacterial Wilt. In: Prior, P.H., Allen, C. and Elphinstone, J., Eds., Bacterial Wilt Disease: Molecular and Ecological Aspects, Springer, Berlin, Heidelberg, 1-5.
https://doi.org/10.1007/978-3-662-03592-4_1
[47]  Milling, A., Meng, F., Denny, T.P. and Allen, C. (2009) Interactions with Hosts at Cool Temperature, not Cold Tolerance, Explain Unique Epidemiology of Ralstonia solanacearum Race 3 Biovar 2. Phytopathology, 99, 1127-1134.
https://doi.org/10.1094/PHYTO-99-10-1127
[48]  Kovacs, N. (1956) Identification of Pseudomonas solanacearum by the Oxidase Reaction. Nature, 178, 703.
https://doi.org/10.1038/178703a0
[49]  Fahy, P.C. and Persley, G.J. (1983) Plant Bacterial Diseases, a Diagnostic Guide. In: Fahy, P.C and Haywad, A.C., Eds., Media and Methods for Isolation and Diagnostic Tests, Acadamic Press, New York, 369-370.
[50]  Hugh, R. and Leifson, E. (1953) The Taxonomic Significance of Fermentative Versus Oxidative Metabolism of Carbohydrates by Various Gram-Negative Bacteria. Journal of Bacteriology, 66, 24-26.
https://doi.org/10.1128/jb.66.1.24-26.1953
[51]  Eden-Green, S. (1995) A Brief History of Lethal Yellowing Research. In: Oropeza, C., Howard, F.W. and Ashburner, G.R., Eds., Lethal Yellowing Research and Practical Aspects, Kluwer Academic Publishers, Dordrecht, 17-33.
https://doi.org/10.1007/978-94-011-0433-3_2
[52]  Messiha, N.A.S. (2006) Bacterial Wilt of Potato (Ralstonia solanacearum Race 3, Biovar 2): Disease Management, Pathogen Survival and Possible Eradication. Wageningen University, Wageningen, 1-164.
[53]  Chamedjeu, R. R., Masanga, J., Matiru, V. and Runo, S. (2018) Isolation and Characterization of Ralstonia solanacearum Strains Causing Bacterial Wilt of Potato in Nakuru County of Kenya. African Journal of Biotechnology, 17, 1455-1465.
https://doi.org/10.5897/AJB2018.16659
[54]  Izadiyan, M. and Taghavi, S.M. (2013) Host Range Variation and Genetic Diversity of Iranian Isolates of Ralstonia solanacearum from Potato and Tomato with RAPD and (GTG) 5-PCR. Journal of Plant Pathology, 95, 87-97.
[55]  Mollae, A., Hosseinipour, A., Azadvar, M., Massumi, H. and Ebrahimi, F. (2020) Phylotype and Sequevar Determination and AFLP Fingerprinting of Ralstonia solanacearum Strains Causing Bacterial Wilt of potato in South-Eastern Iran. European Journal of Plant Pathology, 157, 389-402.
https://doi.org/10.1007/s10658-020-02018-5
[56]  Karim, Z. and Hossain, M.S. (2018) Management of Bacterial Wilt (Ralstonia solanacearum) of Potato: Focus on Natural Bioactive Compounds. Journal of Biodiversity Conservation and Bioresource Management, 4, 73-92.
https://doi.org/10.3329/jbcbm.v4i1.37879
[57]  Buddenhagen, I., Sequeira, L., and Kelman, A. (1962) Designation of races in Pseudomonas solanacearum. Phytopathology, 52, 7263-774.
[58]  Rahman, M.F., Islam, M.R., Rahman, T. and Meah, M.B. (2010) Biochemical Characterization of Ralstonia solanacearum Causing Bacterial Wilt of Brinjal in Bangladesh. Journal of Progressive Agriculture, 21, 9-19.
https://doi.org/10.3329/pa.v21i1-2.16744

Full-Text

Contact Us

service@oalib.com

QQ:3279437679

WhatsApp +8615387084133