To better understand the assembly of the sturgeon egg microbiome, we purified six bacterial isolates from eggs and characterized their ability to form biofilms under the stress of tobramycin, with and without exogenous protein. In experiments with single species biofilms, tobramycin reduced the metabolic activity of all isolates and increased biofilm biomass of three. The addition of exogenous protein to the assay countered the inhibition of biofilm and metabolic activity by tobramycin of Pseudomonas sp., Brevundimonas sp., Flavobacterium columnare and mixed biofilms of Pseudomonas-F. columnare and Brevundimonas-Hydrogenophaga. Two of the isolates (Pseudomonas spp.) that produced antimicrobial activity, were effective at reducing biofilm formation by Brevundimonas, but enhanced biofilm formation in other isolates. Increasing concentrations of Mg2+ had no effect on biofilm formation but Ca2+ enhanced biofilm formation of Pseudomonas aeruginosa PA01 (positive control) and Brevundimonas. Biofilm assembly by these two bacteria was inhibited by low concentrations of Ni2+. Mixed biofilms of Brevundimonas and Hydrogenophage consistently produced more robust biofilm than the strains in isolation, suggesting synergism. Established Brevundimonas biofilm appeared adept at recruiting pelagic Acidovorax and Hydrogenophaga into biofilm, suggesting that it plays an important role in the selection of species into the microbiome.
References
[1]
Roilides, E., et al. (2015) How Biofilms Evade Host Defenses. Microbiology Spectrum, 3, 1-10. https://doi.org/10.1128/9781555817466.ch14
[2]
O’Toole, G., Kaplan, H. and Kolter, R. (2000) Biofilm Formation as Microbial Development. Annual Review of Microbiology, 54, 49-79. https://doi.org/10.1146/annurev.micro.54.1.49
[3]
Mulcahy, L.R., Isabella, V.M. and Lewis, K. (2014) Pseudomonas aeruginosa Biofilms in Disease. Microbial Ecology, 68, 1-12. https://doi.org/10.1007/s00248-013-0297-x
[4]
Kumar, A., et al. (2017) Biofilms: Survival and Defense Strategy for Pathogens. International Journal of Medical Microbiology, 307, 481-489. https://doi.org/10.1016/j.ijmm.2017.09.016
[5]
Jamal, M., et al. (2018) Bacterial Biofilm and Associated Infections. Journal of the Chinese Medical Association, 81, 7-11. https://doi.org/10.1016/j.jcma.2017.07.012
[6]
Jacques, M., Aragon, V. and Tremblay, Y.D. (2010) Biofilm Formation in Bacterial Pathogens of Veterinary Importance. Animal Health Research Reviews, 11, 97-121. https://doi.org/10.1017/S1466252310000149
[7]
Hoiby, N., et al. (2011) The Clinical Impact of Bacterial Biofilms. International Journal of Oral Science, 3, 55-65. https://doi.org/10.4248/IJOS11026
[8]
Fux, C.A., et al. (2005) Survival Strategies of Infectious Biofilms. Trends in Microbiology, 13, 34-40. https://doi.org/10.1016/j.tim.2004.11.010
[9]
Anwar, H., et al. (1992) Dynamic Interactions of Biofilms of Mucoid Pseudomonas aeruginosa with Tobramycin and Piperacillin. Antimicrobial Agents and Chemotherapy, 36, 1208-1214. https://doi.org/10.1128/AAC.36.6.1208
[10]
Anwar, H., Strap, J.L. and Costerton, J.W. (1992) Kinetic Interaction of Biofilm Cells of Staphylococcus aureus with Cephalexin and Tobramycin in a Chemostat System. Antimicrobial Agents and Chemotherapy, 36, 890-893. https://doi.org/10.1128/AAC.36.4.890
[11]
Chorell, E., et al. (2012) Design and Synthesis of Fluorescent Pilicides and Curlicides: Bioactive Tools to Study Bacterial Virulence Mechanisms. Chemistry, 18, 4522-4532. https://doi.org/10.1002/chem.201103936
[12]
Piatek, R., et al. (2013) Pilicides Inhibit the FGL Chaperone/Usher Assisted Biogenesis of the Dr Fimbrial Polyadhesin from Uropathogenic Escherichia coli. BMC Microbiology, 13, Article No. 131. https://doi.org/10.1186/1471-2180-13-131
[13]
Teitzel, G.M. and Parsek, M.R. (2003) Heavy Metal Resistance of Biofilm and Planktonic Pseudomonas aeruginosa. Applied and Environmental Microbiology, 69, 2313-2320. https://doi.org/10.1128/AEM.69.4.2313-2320.2003
[14]
Harrison, J.J., et al. (2004) Biofilm Susceptibility to Metal Toxicity. Environmental Microbiology, 6, 1220-1227. https://doi.org/10.1111/j.1462-2920.2004.00656.x
[15]
Koechler, S., et al. (2015) Toxic Metal Resistance in Biofilms: Diversity of Microbial Responses and Their Evolution. Research in Microbiology, 166, 764-773. https://doi.org/10.1016/j.resmic.2015.03.008
[16]
Schmidtchen, A., et al. (2002) Proteinases of Common Pathogenic Bacteria Degrade and Inactivate the Antibacterial Peptide LL-37. Molecular Microbiology, 46, 157-168. https://doi.org/10.1046/j.1365-2958.2002.03146.x
[17]
Hanke, M.L. and Kielian, T. (2012) Deciphering Mechanisms of Staphylococcal Biofilm Evasion of Host Immunity. Frontiers in Cellular and Infection Microbiology, 2, 62. https://doi.org/10.3389/fcimb.2012.00062
[18]
Bar-On, Y.M. and Milo, R. (2019) Towards a Quantitative View of the Global Ubiquity of Biofilms. Nature Reviews Microbiology, 17, 199-200. https://doi.org/10.1038/s41579-019-0162-0
[19]
Bouwes, N. and Luecke, C. (1997) The Fate of Bonneville Cisco Eggs in Bear Lake: Evaluating Mechanisms of Egg Loss. Transactions of the American Fisheries Society, 126, 240-247. https://doi.org/10.1577/1548-8659(1997)126<0240:TFOBCE>2.3.CO;2
[20]
Fitzsimons, J.D., et al. (2007) Influence of Egg Predation and Physical Disturbance on Lake Trout Salvelinus namaycush Egg Mortality and Implications for Life-History Theory. Journal of Fish Biology, 71, 1-16. https://doi.org/10.1111/j.1095-8649.2007.01437.x
[21]
Smith, S.J. and Marsden, J.E. (2009) Factors Affecting Sea Lamprey Egg Survival. North American Journal of Fisheries Management, 29, 859-868. https://doi.org/10.1577/M07-196.1
[22]
Forsythe, P.S., et al. (2013) Experimental Assessment of the Magnitude and Sources of Lake Sturgeon Egg Mortality. Transactions of the American Fisheries Society, 142, 1005-1011. https://doi.org/10.1080/00028487.2013.790847
[23]
Fujimoto, M. (2012) Microbial Succession on the Lake Sturgeon Egg Surface: Mechanisms Shaping the Microbial Community Assembly during Succession and the Effect of Microbial Successional Processes on Host Life History Traits. Microbiology and Molecular Genetics, Michigan State University, East Lansing.
[24]
Fujimoto, M., et al. (2018) Antagonistic Interactions and Biofilm Forming Capabilities among Bacterial Strains Isolated from the Egg Surfaces of Lake Sturgeon (Acipenser fulvescens). Microbial Ecology, 75, 22-37. https://doi.org/10.1007/s00248-017-1013-z
[25]
Ye, D., et al. (2020) Exogenous Protein as an Environmental Stimulus of Biofilm Formation in Select Bacterial Strains. Advances in Microbiology, 10, 123-144. https://doi.org/10.4236/aim.2020.103011
[26]
Davis, J.J., et al. (2020) The PATRIC Bioinformatics Resource Center: Expanding Data and Analysis Capabilities. Nucleic Acids Research, 48, D606-D612.
[27]
Yu, Q., et al. (2012) In Vitro Evaluation of Tobramycin and Aztreonam versus Pseudomonas aeruginosa Biofilms on Cystic Fibrosis-Derived Human Airway Epithelial Cells. Journal of Antimicrobial Chemotherapy, 67, 2673-2681. https://doi.org/10.1093/jac/dks296
[28]
Tre-Hardy, M., et al. (2010) Efficacy of the Combination of Tobramycin and a Macrolide in an in Vitro Pseudomonas aeruginosa Mature Biofilm Model. Antimicrobial Agents and Chemotherapy, 54, 4409-4415. https://doi.org/10.1128/AAC.00372-10
[29]
Moreau-Marquis, S., O’Toole, G.A. and Stanton, B.A. (2009) Tobramycin and FDA-Approved Iron Chelators Eliminate Pseudomonas aeruginosa Biofilms on Cystic Fibrosis Cells. American Journal of Respiratory Cell and Molecular Biology, 41, 305-313. https://doi.org/10.1165/rcmb.2008-0299OC
[30]
Kim, J., et al. (2008) Comparison of the Antimicrobial Effects of Chlorine, Silver Ion, and Tobramycin on Biofilm. Antimicrobial Agents and Chemotherapy, 52, 1446-1453. https://doi.org/10.1128/AAC.00054-07
[31]
Anderson, G.G., et al. (2008) In Vitro Analysis of Tobramycin-Treated Pseudomonas aeruginosa Biofilms on Cystic Fibrosis-Derived Airway Epithelial Cells. Infection and Immunity, 76, 1423-1433. https://doi.org/10.1128/IAI.01373-07
[32]
Bulitta, J.B., et al. (2015) Two Mechanisms of Killing of Pseudomonas aeruginosa by Tobramycin Assessed at Multiple Inocula via Mechanism-Based Modeling. Antimicrobial Agents and Chemotherapy, 59, 2315-2327. https://doi.org/10.1128/AAC.04099-14
[33]
Mulcahy, H. and Lewenza, S. (2011) Magnesium Limitation Is an Environmental Trigger of the Pseudomonas aeruginosa Biofilm Lifestyle. PLoS ONE, 6, e23307. https://doi.org/10.1371/journal.pone.0023307
[34]
Perrin, C., et al. (2009) Nickel Promotes Biofilm Formation by Escherichia coli K-12 Strains That Produce Curli. Applied and Environmental Microbiology, 75, 1723-1733. https://doi.org/10.1128/AEM.02171-08
[35]
Song, B. and Leff, L.G. (2006) Influence of Magnesium Ions on Biofilm Formation by Pseudomonas fluorescens. Microbiological Research, 161, 355-361. https://doi.org/10.1016/j.micres.2006.01.004
[36]
Wang, T., Flint, S. and Palmer, J. (2019) Magnesium and Calcium Ions: Roles in Bacterial Cell Attachment and Biofilm Structure Maturation. Biofouling, 35, 959-974. https://doi.org/10.1080/08927014.2019.1674811
[37]
Merritt, J.H., Kadouri, D.E. and O’Toole, G.A. (2011) Growing and Analyzing Static Biofilms. Current Protocols in Microbiology, 22, B.1.1-1B.1.18. https://doi.org/10.1002/9780471729259.mc01b01s22
[38]
O’Toole, G.A. (2011) Microtiter Dish Biofilm Formation Assay. Journal of Visualized Experiments, 47, 2437. https://doi.org/10.3791/2437
[39]
Peeters, E., Nelis, H.J. and Coenye, T. (2008) Comparison of Multiple Methods for Quantification of Microbial Biofilms Grown in Microtiter Plates. Journal of Microbiological Methods, 72, 157-165. https://doi.org/10.1016/j.mimet.2007.11.010
[40]
Sandberg, M.E., et al. (2009) Pros and Cons of Using Resazurin Staining for Quantification of Viable Staphylococcus aureus Biofilms in a Screening Assay. Journal of Microbiological Methods, 78, 104-106. https://doi.org/10.1016/j.mimet.2009.04.014
[41]
Van den Driessche, F., et al. (2014) Optimization of Resazurin-Based Viability Staining for Quantification of Microbial Biofilms. Journal of Microbiological Methods, 98, 31-34. https://doi.org/10.1016/j.mimet.2013.12.011
[42]
Fujimoto, M., et al. (2013) Microbial Community Assembly and Succession on Lake Sturgeon Egg Surfaces as a Function of Simulated Spawning Stream Flow Rate. Microbial Ecology, 66, 500-511. https://doi.org/10.1007/s00248-013-0256-6
[43]
Garo, E., et al. (2007) Asiatic Acid and Corosolic Acid Enhance the Susceptibility of Pseudomonas aeruginosa Biofilms to Tobramycin. Antimicrobial Agents and Chemotherapy, 51, 1813-1817. https://doi.org/10.1128/AAC.01037-06
[44]
Elliott, D., Burns, J.L. and Hoffman, L.R. (2010) Exploratory Study of the Prevalence and Clinical Significance of Tobramycin-Mediated Biofilm Induction in Pseudomonas aeruginosa Isolates from Cystic Fibrosis Patients. Antimicrobial Agents and Chemotherapy, 54, 3024-3026. https://doi.org/10.1128/AAC.00102-10
Flemming, H.-C., et al. (2016) Biofilms: An Emergent Form of Bacterial Life. Nature Reviews Microbiology, 14, 563-575. https://doi.org/10.1038/nrmicro.2016.94
Goerke, J. (1998) Pulmonary Surfactant: Functions and Molecular Composition. Biochimica et Biophysica Acta Molecular Basis of Disease, 1408, 79-89. https://doi.org/10.1016/S0925-4439(98)00060-X
[49]
Vilcheze, C., et al. (2017) Enhanced Respiration Prevents Drug Tolerance and Drug Resistance in Mycobacterium tuberculosis. Proceedings of the National Academy of Sciences of the United States of America, 114, 4495-4500. https://doi.org/10.1073/pnas.1704376114
[50]
Lewis, K. (2005) Persister Cells and the Riddle of Biofilm Survival. Biochemistry (Moscow), 70, 267-274. https://doi.org/10.1007/s10541-005-0111-6
[51]
Lewis, K. (2008) Multidrug Tolerance of Biofilms and Persister Cells. In: Romeo, T., Ed., Current Topics in Microbiology and Immunology, Springer-Verlag, Berlin, 107-132. https://doi.org/10.1007/978-3-540-75418-3_6
[52]
Gujarathi, N.P. and Linden, J.C. (2005) Oxytetracycline Inactivation by Putative Reactive Oxygen Species Released to Nutrient Medium of Helianthus annuus Hairy Root Cultures. Biotechnology & Bioengineering, 92, 393-402. https://doi.org/10.1002/bit.20698
[53]
Ferris, F.G. and Beveridge, T.J. (1986) Physicochemical Roles of Soluble Metal Cations in the Outer Membrane of Escherichia coli K-1. Canadian Journal of Microbiology, 32, 594-601. https://doi.org/10.1139/m86-110
[54]
Hoyle, B. and Beveridge, T.J. (1983) Binding of Metallic Ions to the Outer Membrane of Escherichia coli. Applied and Environmental Microbiology, 46, 749-752. https://doi.org/10.1128/AEM.46.3.749-752.1983
[55]
Babich, H. and Stotzky, G. (1983) Toxicity of Nickel to Microbes: Environmental Aspects. Advances in Applied Microbiology, 29, 195-265. https://doi.org/10.1016/S0065-2164(08)70358-7
[56]
Macomber, L. and Hausinger, R.P. (2011) Mechanisms of Nickel Toxicity in Microorganisms. Metallomics, 3, 1153-1162. https://doi.org/10.1039/c1mt00063b
[57]
Ancion, P.Y., et al. (2013) Metal Concentrations in Stream Biofilm and Sediments and Their Potential to Explain Biofilm Microbial Community Structure. Environmental Pollution, 173, 117-124. https://doi.org/10.1016/j.envpol.2012.10.012
[58]
Curtis, P.D. (2017) Stalk Formation of Brevundimonas and How It Compares to Caulobacter crescentus. PLoS ONE, 12, e0184063. https://doi.org/10.1371/journal.pone.0184063
[59]
Sly, L.I., Cox, T.L. and Beckenham, T.B. (1999) The Phylogenetic Relationships of Caulobacter, Asticcacaulis and Brevundimonas Species and Their Taxonomic Implications. International Journal of Systematic Bacteriology, 49, 483-488. https://doi.org/10.1099/00207713-49-2-483
[60]
Poindexter, J.S. (2006) Dimorphic Prosthecate Bacteria: The Genera Caulobacter, Asticcacaulis, Hyphomicrobium, Pedomicrobium, Hyphomonas and Thiodendron. In: Dworkin, M., et al., Eds., Prokaryotes: A Handbook on the Biology of Bacteria, Vol. 5, Third Edition: Proteobacteria: Alpha and Beta Subclasses, Springer, New York, 72-90. https://doi.org/10.1007/0-387-30745-1_4
[61]
Park, Y., et al. (2007) Growth Promotion of Chlorella ellipsoidea by Co-Inoculation with Brevundimonas sp. Isolated from the Microalga. Hydrobiologia, 598, 219-228. https://doi.org/10.1007/s10750-007-9152-8
[62]
Pastore, M. and Sforza, E. (2018) Exploiting Symbiotic Interactions between Chlorella protothecoides and Brevundimonas diminuta for an Efficient Single-Step Urban Wastewater Treatment. Water Science and Technology, 78, 216-224. https://doi.org/10.2166/wst.2018.155
[63]
Naqqash, T., et al. (2020) First Report of Diazotrophic Brevundimonas spp. as Growth Enhancer and Root Colonizer of Potato. Scientific Reports, 10, Article No. 12893. https://doi.org/10.1038/s41598-020-69782-6