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OALib Journal期刊
ISSN: 2333-9721
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-  2017 

A new technology for the synthesis of long DNA strings

Keywords: Oxford Nanopore Technologies, nanopore, programmed synthesis, long DNA strings, single-stranded DNA ligase a a?? membrane, b a?? ?±-hemolysin nanopore, single nucleotide according to the program, c a?? ssDNA ligase, d a?? protein as a funnel, directing the nucleotide to the active center of ssDNA ligase, e a?? nanotube controlled by a computer with an electromagnetic field, f a?? bottom view of the nanotube. g a?? DNA polymerase III, h a?? free nucleotide for the synthesis of a parallel DNA string and RNA primer, i a?? polymerase I, j a?? primase, k a?? RNA primer, l a?? ligase. Construction of an injection nanotube. a a?? middle gradually expanding nanotube, b a?? nanotube as electrodes, c a?? electrical insulation cover from the polymer. a a?? Above the nanopore with ssDNA ligase are 4 nanotubes (e.g., carbon nanotube), b a?? upper well, c a?? bottom well, d a?? the bottom well contains polymerase that synthesizes dsDNA, e a?? link with another well and with ?±-hemolysin nanopore and connected dsDNA ligase.

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Abstract:

We present a new theoretical technical solution application of nanopore sequencing (Oxford Nanopore Technologies, https://www. nanoporetech.com/), which has primarily been used to read molecules. We describe how to apply nanopore sequencing for the production of a new type of device synthesing of molecules according to our requirements of a chosen database that has been prepared in advance. This technology can implement the programmed synthesis of long DNA strings, ideally entire chromosomes. We propose a device using nanopores and a system of nanotubes that can synthesize molecules using individual nucleotides, existing single-stranded DNA (ssDNA) ligase or modified forms of ssDNA ligase and the energy provided by ATP. The second strand is synthesized by Taq polymerase, which is located below the nanopore. The synthesis of long strings is performed using many nanopores positioned linearly. The strings are collected in wells below the nanopore, after which the strings are ligated to form a long single string (or to form part or all of a chromosome) by double-stranded DNA (dsDNA) ligase. There are many options for successful implementation, particularly in the field of genetic engineering

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