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-  2019 

Kermit: linkage map guided long read assembly

DOI: 10.1186/s13015-019-0143-x

Keywords: Genome assembly, Linkage maps, Coloured overlap graph

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Abstract:

Unitigs can be efficiently found by first looking for a vertex with either zero or more than one incoming edge and exactly one outgoing edge. Following the outgoing edges until we find a vertex with more than one incoming edge or zero or more than one outgoing edge constructs a path spelling a unitig

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