全部 标题 作者
关键词 摘要

OALib Journal期刊
ISSN: 2333-9721
费用:99美元

查看量下载量

相关文章

更多...

Molecular Typing of Clinical and Environmental Cryptococcus neoformans Strains Isolated in Italy

DOI: 10.4236/ojmm.2017.74007, PP. 77-85

Keywords: Cryptococcus neoformans, Clinical Isolates, Environmental Isolates, Molecular Typing, Molecular Types Distribution

Full-Text   Cite this paper   Add to My Lib

Abstract:

Cryptococcus neoformans is an encapsulated yeast causing mainly opportunistic infections. DNA molecular typing techniques divided C. neoformans into four major molecular types (AFLP1/VNI, AFLP1A/VNB/VNII, AFLP1B/ VNII, AFLP3/VNIII, AFLP2/VNIV) characterized by different pathogenicity, geographical distribution and susceptibility to antifungal treatments. In this study 170 Italian C. neoformans clinical isolates (CI) and 32 environmental isolates (EI), collected and serotyped during a ten-year period (1985 to 1995), were genotyped using [GACA]4 microsatellite PCR fingerprinting. The molecular types were compared to their geographic distribution, specimen sources and patient’s risk factors. All four molecular types were described among the CI and only VNI and VNIV among the EI. VNIV molecular type was isolated with significant prevalence among the CI and VNI among the EI. A different geographical distribution of molecular types was detected: VNIV was the most prevalent in the North and Center of Italy; VNIII was isolated almost exclusively in the Center. No significant correlation among molecular types versus predisposing diseases or isolation sources was detected. The strains isolated from different body sites of the same patient (17 cases) were of the same genotype. Five out 9 cases relapsed with a different molecular type. This preliminary investigation shows a high intraspecies variability and reveals a nonhomogeneous distribution of C. neoformans molecular types in Italy.

References

[1]  Khawcharoenporn, T., Apisarnthanarak, A. and Mundy, L.M. (2007) Non-neoformans Cryptococcal Infections: A Systematic Review. Infection, 35, 51-58.
https://doi.org/10.1007/s15010-007-6142-8
[2]  Hagen, F., Khayhan, K., Theelen, B., Kolecka, A., Polacheck, I., et al. (2015) Recognition of Seven Species in the Cryptococcus gattii/Cryptococcus neoformans Species Complex. Fungal Genetics and Biology, 78, 16-48.
https://doi.org/10.1016/j.fgb.2015.02.009
[3]  Kwon-Chung, K.J., Bennett, J.E., Wickes, B.L., Meyer, W., Cuomo, C.A., et al. (2017) The Case for Adopting the “Species Complex” Nomenclature for the Etiologic Agents of Cryptococcosis. mSphere, 2, e00357-16.
https://doi.org/10.1128/mSphere.00357-16
[4]  Kwon-Chung, K.J. and Varma, A. (2006) Do Major Species Concepts Support One, Two or More Species within Cryptococcus neoformans? FEMS Yeast Research, 6, 574-587.
https://doi.org/10.1111/j.1567-1364.2006.00088.x
[5]  Boekhout, T., Theelen, B., Diaz, M., Fell, J.W., Hop, W.C., et al. (2001) Hybrid Genotypes in the Pathogenic Yeast Cryptococcus neoformans. Microbiology, 147, 891-907.
https://doi.org/10.1099/00221287-147-4-891
[6]  Meyer, W., Marszewska, K., Amirmosto¢an, M., Igreja, R.P., Hardtke, C., et al. (1999) Molecular Typing of Global Isolates of Cryptococcus neoformans var. neoformans by Polymerase Chain Reaction Fingerprinting and Randomly Amplified Polymorphic DNA—A Pilot Study to Standardize Techniques on Which to Base a Detailed Epidemiological Survey. Electrophoresis, 20, 1790-1799.
https://doi.org/10.1002/(SICI)1522-2683(19990101)20:8<1790::AID-ELPS1790>3.0.CO;2-2
[7]  Meyer, W., Castañeda, A., Jackson, S., Huynh, M. and Castañeda, E., IberoAmerican Cryptococcal Study Group (2003) Molecular Typing of Iberoamerican Cryptococcus neoformans Isolates. Archive of Emerging Infectious Diseases, 9, 189-195.
https://doi.org/10.3201/eid0902.020246
[8]  Meyer, W., Aanensen, D.M., Boekhout, T., Cogliati, M., Diaz, M.R., et al. (2009) Consensus Multi-Locus Sequence Typing Scheme for Cryptococcus neoformans and Cryptococcus gattii. Medical Mycology, 47, 561-570.
https://doi.org/10.1080/13693780902953886
[9]  Cogliati, M. (2013) Global Molecular Epidemiology of Cryptococcus neoformans and Cryptococcus gattii: An Atlas of the Molecular Types. Scientifica, 2013, Article ID: 675213.
https://doi.org/10.1155/2013/675213
[10]  Hagen, F., Illnait-Zaragozí, M.T., Meis, J.F., Chew, W.H, Curfs-Breuker, I., et al. (2012) Extensive Genetic Diversity within the Dutch Clinical Cryptococcus neoformans Population. Journal of Clinical Microbiology, 50, 1918-1926.
https://doi.org/10.1128/JCM.06750-11
[11]  Antinori, S. (2013) New Insights into HIV/AIDS-Associated Cryptococcosis. ISRN AIDS, 2013, Article ID: 471363.
https://doi.org/10.1155/2013/471363
[12]  Meyer, W. and Trilles, L. (2010) Genotyping of the Cryptococcus neoformans/C. gattii Species Complex. Australian Biochemist, 41, 12-16.
[13]  Cogliati, M., D’amicis, R., Zani, A., Montagna, M.T., Caggiano, G., et al. (2016) Environmental Distribution of Cryptococcus neoformans and C. gattii around the Mediterranean Basin. FEMS Yeast Research, 16, fow045.
https://doi.org/10.1093/femsyr/fow045
[14]  Barreto de Oliveira, M.T., Boekhout, T., Theelen, B., Hagen, F., Baroni, F.A., et al. (2004) Cryptococcus neoformans Shows a Remarkable Genotypic Diversity in Brazil. Journal of Clinical Microbiology, 42, 1356-1359.
https://doi.org/10.1128/JCM.42.3.1356-1359.2004
[15]  Frasés, S., Ferrer, C., Sánchez, M. and Colom-Valiente, M.F. (2009) Molecular Epidemiology of Isolates of the Cryptococcus neoformans Species Complex from Spain. Revista Iberoamericana de Micología, 26, 112-117.
https://doi.org/10.1016/S1130-1406(09)70021-X
[16]  Viviani, M.A., Cogliati, M., Esposto, M.C., Lemmer, K., Tintelnot, K., et al. (2006) European Confederation of Medical Mycology (ECMM) Cryptococcosis Working Group. Molecular Analysis of 311 Cryptococcus neoformans Isolates from a 30-Month ECMM Survey of Cryptococcosis in Europe. FEMS Yeast Research, 6, 614-619.
https://doi.org/10.1111/j.1567-1364.2006.00081.x
[17]  Gargani, G. and Pini, G. (1998) Indagine Sulla Criptococcosi in Italia. 1. Osservazioni Epidemiologiche. Microbiologia Medica, 13, 648-655.
[18]  Gargani, G. and Pini, G. (1998) Indagine Sulla Criptococcosi in Italia. 2. Caratteri Degli Stipiti Isolati. Microbiologia Medica, 13, 656-661.
[19]  Reiss, E., Shadomy, H.J. and Lyon, G.M. (2011) Fundamental Medical Mycology. John Wiley & Sons, Eds., Haboken, New Jersey, Chapter 12.13.
https://doi.org/10.1002/9781118101773
[20]  Kwon-Chung, K.J., Polacheck, I. and Bennett, J.E. (1982) Improved Diagnostic Medium for Separation of Cryptococcus neoformans var. neoformans (Serotypes A and D) and Cryptococcus neoformans var. gattii (serotypes B and C). Journal of Clinical Microbiology, 15, 535-537.
[21]  Dufait, R., Velho, R. and De Vroey, C. (2000) Rapid Identification of the Two Varieties of Cryptococcus neoformans by D-Proline Assimilation. Clinical Microbiology Reviews, 13, 122-143.
[22]  Pini, G., Faggi, E., Campisi, E. and Gargani, G. (1998) Typing of Cryptococcus neoformans Strains by Random PCR. Journal de Mycologie Médicale, 8, 7-12.
[23]  Sanchini, A., Smith, I.M., Sedlacek, L., Schwarz, R., Tintelnot, K., et al. (2014) Molecular Typing of Clinical Cryptococcus neoformans Isolates Collected in Germany from 2004 to 2010. Medical Microbiology and Immunology, 203, 333-340.
https://doi.org/10.1007/s00430-014-0341-6
[24]  FIMUA Cryptococcosis Network (2002) European Confederation of Medical Mycology (ECMM) Prospective Survey of Cryptococcosis: Report from Italy. Medical Mycology, 40, 507-517.
https://doi.org/10.1080/mmy.40.5.507.517
[25]  Cogliati, M., Tortorano, A.M. and FIMUA Cryptococcosis Network (2014) Second Prospective Survey on Cryptococcosis in Italy after 10 Years. Mycoses, 57, S33-S34.
[26]  Pernice, I., Lo Passo, C., Criseo, G., Pernice, A. and Todaro-Luck, F. (1999) Molecular Subtyping of Clinical and Environmental Strains of Cryptococcus neoformans Variety Neoformans Serotype A Isolated from Southern Italy. Mycoses, 41, 117-124.
https://doi.org/10.1111/j.1439-0507.1998.tb00312.x
[27]  Martinez, L.R., Garcia-Rivera, J. and Casadevall, A. (2001) Cryptococcus neoformans var. neoformans (serotype D) Strains Are More Susceptible to Heat than C. neoformans var. grubii (serotype A) Strains. Journal of Clinical Microbiology, 39, 3365-3367.
https://doi.org/10.1128/JCM.39.9.3365-3367.2001
[28]  Cogliati, M., Zamfirova, R.R., Tortorano, A.M., Viviani, M.A. and FIMUA Cryptococcosis Network (2013) Molecular Epidemiology of Italian Clinical Cryptococcus neoformans var grubii Isolates. Medical Mycology, 51, 499-506.
https://doi.org/10.3109/13693786.2012.751642
[29]  Desnos-Ollivier, M., Patel, S., Raoux-Barbot, D., Heitman, J., Dromer, F., et al. (2015) Cryptococcosis Serotypes Impact Outcome and Provide Evidence of Cryptococcus neoformans Speciation. MBio, 6, e00311-15.
https://doi.org/10.1128/mBio.00311-15
[30]  Choi, Y.H., Ngamskulrungroj, P., Varma, A., Sionov, E., Hwang, S.M., et al. (2010) Prevalence of the VNIc Genotype of Cryptococcus neoformans in Non-HIV-Associated Cryptococcosis in the Republic of Korea. FEMS Yeast Research, 10, 769-778.
https://doi.org/10.1111/j.1567-1364.2010.00648.x
[31]  Mihara, T., Izumikawa, K., Saijo, T., Ngamskulrungroj, P., Umeyama, T., et al. (2012) Multilocus Sequence Typing of Cryptococcus neoformans in Non-HIV Associated Cryptococcosis in Nagasaki, Japan. Medical Mycology, 51, 252-260.
https://doi.org/10.3109/13693786.2012.708883
[32]  Naka, W., Masuda, M., Konohana, A., Shinoda, T. and Nishikawa, T. (1995) Primary Cutaneous Cryptococcosis and Cryptococcus neoformans Serotype D. Clinical and Experimental Dermatology, 20, 221-225.
https://doi.org/10.1111/j.1365-2230.1995.tb01306.x
[33]  Guinea, J., Hagen, F., Peláez, T., Boekhout, T., Tahoune, H., et al. (2010) Antifungal Susceptibility, Serotyping, and Genotyping of Clinical Cryptococcus neoformans Isolates Collected during 18 Years in a Single Institution in Madrid, Spain. Medical Mycology, 48, 942-948.
https://doi.org/10.3109/13693781003690067

Full-Text

Contact Us

service@oalib.com

QQ:3279437679

WhatsApp +8615387084133