OALib Journal期刊
ISSN: 2333-9721
费用:99美元
|
|
|
青?pwwrba基因克隆及表达分析
DOI: 10.3969/j.issn.1000-2006.2014.04.007, PP. 34-38
Keywords: 青?,wrba基因,生物信息学,组织表达,胁迫响应
Abstract:
色氨酸阻遏结合蛋白(tryptophanrepressor-bindingprotein,wrba)是一种重要的抗氧化酶类,参与了多种逆境反应。笔者通过race-pcr的方法克隆得到青?wrba基因的cdna全长,共1045bp,编码区651bp,编码203个氨基酸。利用生物信息学工具对其进行理化性质、二级结构和三级结构的分析,该蛋白理论分子质量21.80ku,pi值6.43,n端11―15位氨基酸和c端112―165位氨基酸是fmn结合位点。荧光定量pcr和半定量rt-pcr发现青?pwwrba在各组织中都有表达,但在针叶中表达量最高。同时,pwwrba在nacl和aba胁迫处理后表达量升高,h2o2也会影响其表达的改变,h2o2处理6h后表达量上调。因此,pwwrba是一个新的wrba基因,推测其可能在青?逆境胁迫应答中发挥作用。
References
[1] | yangw,nil,somervillerl.astationary-phaseproteinofescherichiacolithataffectsthemodeofassociationbetweenthetrprepressorproteinandoperator-bearingdna[j].procnatlacadsciusa,1993,90(12):5796-5800.
|
[2] | jacksonsa,kotewiczml,patelir,etal.rapidgenomic-scaleanalysisofescherichiacolio104:h4byusinghigh-resolutionalternativemethodstonext-generationsequencing[j].applenvironmicrobiol,2012,78(5):1601-1605.
|
[3] | liux,dewulfp.probingthearca-pmodulonofescherichiacolibywholegenometranscriptionalanalysisandsequencerecognitionprofiling[j].jbiolchem,2004,279(13):12588-12597.
|
[4] | kangy,weberkd,qiuy,etal.genome-wideexpressionanalysisindicatesthatfnrofescherichiacolik-12regulatesalargenumberofgenesofunknownfunction[j].jbacteriol,2005,187(3):1135-1160.
|
[5] | careyj,bryndaj,wolfovaj,etal.wrbabridgesbacterialflavodoxinsandeukaryoticnad(p)h:quinineoxidoreductases[j].proteinsci,2007,16(10):2301-2305.
|
[6] | weiq,lingl,zhanggz,etal.water-holdingcharacteristicsandaccumulationamountofthelittersundermainforesttypesinxinglongmountainofgansu,northwestchina[j].chinesejournalofappliedecology,2011,22(10):2589-2598.
|
[7] | 张盾,刘亚静,李长江,等.青?均一化cdna文库构建及est序列分析[j].生物技术通报,2012(6):71-76.zhangd,liuyj,licj,etal.constructionofnormalizedcdnalibraryandanalysisofcorrespondingestsequencesinpiceawilsonii[j].biotechnologybulletin,2012(6):71-76.
|
[8] | yuy,liy,huangg,etal.thepwhap5,accaat-bindingtranscriptionfactor,interactswithpwfkbp12andplaysaroleinpollentubegrowthorientationinpiceawilsonii[j].jexpbot,2011,62(14):4805-4817.
|
[9] | 陈颖,徐彩平,汪南阳,等.盐胁迫下水杨酸对南林895杨组培苗抗氧化系统的影响[j].南京林业大学学报:自然科学版,2012,36(6):17-22.cheny,xucp,wangny,etal.effectsofsalicylicacidonoxidationresistanceofnanlin895poplarplantletsinvitroundersaltstress[j].journalofnanjingforestryuniversity:naturalsciencesedition,2012,36(6):17-22.
|
[10] | 李长江,孙帆,张通,等.青?pwpsaf基因的克隆与组织表达分析[j].林业科学,2013,49(10):40-47.licj,sunf,zhangt,etal.cloningandtissueexpressionanalysisofpwpsakinpiceawilsonii[j].scientiasilvaesinicae,2013,49(10):40-47.
|
[11] | borsonnd,salowl,dreweslr.alock-dockingoligo(dt)primerfor5’and3’racepcr[j].pcrmethodsappl,1992,2(2):144-148.
|
[12] | wolfovaj,mestersjr,bryndaj,etal.crystallizationandpreliminarydiffractionanalysisofescherichiacoliwrbaincomplexwithitscofactorflavinmononucleotide[j].actacrystallogrsectfstructbiolcrystcommun,2007,63(7):571-575.
|
[13] | voynowja,fischerbm,zhengs,etal.nad(p)hquinineoxidoreductase1isessentialforozone-inducedoxidativestressinmiceandhumans[j].amjrespircellmolbiol,2009,41(1):107-113.
|
[14] | heynoe,alkann,fluhrr.adualroleforplantquinonereductasesinhost-fungusinteraction[j/ol].physiolplant,2013,149(3):340-353.
|
[15] | grandorir,khalifahp,boiceja,etal.biochemicalcharacterizationofwrba,foundingmemberofanewfamilyofmultimericflavodoxin-likeproteins[j].jbiolchem,1998,273(33):20960-20966.
|
[16] | patridgeev,ferryjg.wrbafromescherichiacoliandarchaeoglobusfulgidusisannad(p)h:quinoneoxidoreductase[j].jbacteriol,2006,188(10):3498-3506.
|
[17] | wolfovaj,smatanovaik,bryndaj,etal.structuralorganizationofwrbainapo-andholoproteincrystals[j].biochimicaetbiophysicaacta-proteinsandproteomics,2009,1794(9):1288-1298.
|
[18] | changde,smalleydj,conwayt.geneexpressionprofilingofescherichiacoligrowthtransitions:anexpandedstringentresponsemodel[j].molmicrobiol,2002,45(2):289-306.
|
[19] | allenkj,leppd,mckellarrc,etal.examinationofstressandvirulencegeneexpressioninescherichiacolio157:h7usingtargetedmicroarrayanalysis[j].foodbornepathogdis,2008,5(4):437-447.
|
[20] | phadtares,katoi,inouyem.dnamicroarrayanalysisoftheexpressionprofileofescherichiacoliinresponsetotreatmentwith4,5-dihydroxy-2-cyclopenten-1-one[j].jbacteriol,2002,184(23):6725-6729.
|
[21] | villaf,remelliw,forlanif,etal.alteredexpressionlevelofescherichiacoliproteinsinresponsetotreatmentwiththeantifoulingagentzostericacidsodiumsalt[j].environmicrobiol,2012,14(7):1753-1761.
|
[22] | grandorir,careyj.sixnewcandidatemembersofthealpha/betatwistedopen-sheetfamilydetectedbysequencesimilaritytoflavodoxin[j].proteinsci,1994,3(12):2185-2193.
|
[23] | laskowskimj,dreherka,gehringma,etal.qr1,anovelprimaryauxin-responsegene,encodesaflavinmononucleotide-bindingquinonereductase[j].plantphysiology,2002,128(2):578-590.
|
[24] | kishkoi,harishb,zayatsv,etal.biphasickineticbehaviorofe.coliwrba,anfmn-dependentnad(p)h:quinoneoxidoreductase[j/ol].plosone,2012,7(8):e43902.
|
Full-Text
|
|
Contact Us
service@oalib.com QQ:3279437679 
WhatsApp +8615387084133
|
|