Gross P S, Bartlett T C, Browdy C L, et al. Immune gene discovery by expressed sequence tag analysis of hemocytes and hepatopancreas in the Pacific White Shrimp, Litopenaeus vannamei, and the Atlantic White Shrimp, L. setiferus[J]. Developmental and Comparative Immunology, 2001,25(7): 565-577.
[2]
Xiang J H. Over 10,000 expressed sequence tags from Fenneropenaeus chinensis[R]//International Aquaculture Conference and Exposition, Beijing, 2002:101-102.
[3]
Cesar J R, Zhao B, Yang J. Analysis of expressed sequence tags from abdominal muscle cDNA library of the pacific white shrimp Litopenaeus vannamei[J]. Animal, 2008, 2(09):1377-1388.
[4]
Freitas P D, Pinheiro A P, et al. In silico analysis of polymorphic microsatellites in penaeid shrimp and construction of a free-access database[J]. Genetics and Molecular Biology, 2007, 30(4): 1194-1197.
[5]
Ciobanu D C, Bastiaansen J W, Magrin J, et al. A major SNP resource for dissection of phenotypic and genetic variation in Pacific white shrimp (Litopenaeus vannamei)[J]. Animal genetics, 2010, 41(1): 39-47.
[6]
Liang F, Holt I, Pertea G, et al. An optimized protocol for analysis of EST sequences[J]. Nucleic acids research, 2000,28(18): 3657-3665.
[7]
Ye J, Fang L, Zheng H, et al. WEGO: a web tool for plotting GO annotations[J]. Nucleic Acids Research, 2006,34: W293-297.doi:10.1093/nar/gk1031.
[8]
Kanehisa M, Goto S. KEGG: Kyoto Encyclopedia of Genes and Genomes[J]. Nucleic Acids Research,2000,28(1): 27-30.
[9]
Marchler-Bauer A, et al. CDD: a Conserved Domain Database for the functional annotation of proteins[J]. Nucleic Acids research, 2011,39(D): 225-229.
[10]
Zhang Y, Dong C. Regulatory mechanisms of mitogen-activated kinase signaling[J]. Cell Mol Life Sci, 2007,64(21): 2771-2789.
[11]
Noselli S, Agnès F. Roles of the JNK signaling pathway in Drosophila morphogenesis[J]. Current Opinion in Genetics and Development, 1999, 9(4): 466-472.
[12]
Dall W, Hill B J, Rothlisberg P C, et al. The biology of the penaeidae[J]. Advances in Marine Biology, 1990, 27: 1-489.
[13]
Adams M D, Kelley J M, et al. Complementary-DNA sequencing-expressed sequence tags and human genome project[J]. Science,1991, 252(5013): 1651-1656.
[14]
Lehnert S A, Wilson K J, Byrne K, et al. Tissue-Specific Expressed Sequence Tags from the Black Tiger Shrimp Penaeus monodon[J]. Marine Biotechnology, 1999,1: 465-476.
[15]
Rojtinnakorn J, Hirono I, Itami T, et al. Gene expression in haemocytes of kuruma prawn, Penaeus japonicus, in response to infection with WSSV by EST approach [J]. Fish & Shellfish Immunology, 2002,13(1): 69-83.
[16]
O\'Leary N A, Trent H F, Robalino J,et al. Analysis of multiple tissue-specific cDNA libraries from the Pacific whiteleg shrimp, Litopenaeus vannamei[J]. Integrative and Comparative Biology, 2006, 46(6): 931-939.
[17]
Perez F, Ortiz J, Zhinaula M, et al. Development of EST-SSR markers by data mining in three species of shrimp: Litopenaeus vannamei, Litopenaeus stylirostris, and Trachypenaeus birdy[J]. Mar Biotechnol (NY), 2005, 7(5): 554-569.
Gorbach D M, Hu Z L, Du Z Q, et al. SNP discovery in Litopenaeus vannamei with a new computational pipeline[J]. Animal Genetics, 2009, 40(1): 106-109.
[20]
Liu C Z, Wang X, Xiang J H, et al. EST-derived SNP discovery and selective pressure analysis in Pacific white shrimp (Litopenaeus vannamei)[J]. Chinese Journal of Oceanology and Limnology, accepted, 2012.
[21]
Pertea G, Huang X, Liang F, et al. TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets[J]. Bioinformatics, 2003,19(5): 651-652.
[22]
Ashburner M, Ball C A, Blake J A, et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium[J]. Nature Genetics, 2000,25(1): 25-29.
[23]
Moriya Y, Itoh M, Okuda S, et al. KAAS: an automatic genome annotation and pathway reconstruction server[J]. Nucleic Acids Research, 2007,35(Web Server issue): W182-W185.
[24]
Biggs W H, et al. The Drosophila rolled locus encodes a MAP kinase required in the sevenless signal transduction pathway[J]. EMBO J, 1994,13(7): 1628-1635.
[25]
Adachi-Yamada T, et al. p38 mitogen-activated protein kinase can be involved in transforming growth factor β superfamily signal transduction in drosophila wing morphogenesis[J]. Mol Cell Biol, 1999,19(3): 2322-2329.
[26]
Peattie A M. Functional demands of dynamic biological adhesion: an integrative approach[J]. Journal of Comparative Physiology B, 2008,179(3): 231-239.
