全部 标题 作者
关键词 摘要

OALib Journal期刊
ISSN: 2333-9721
费用:99美元

查看量下载量

相关文章

更多...

基于S7核糖体蛋白基因部分序列的石鲈属鱼类分子系统进化关系

DOI: 10.3969/j.issn.0253-4193.2013.01.019, PP. 165-171

Keywords: 石鲈亚科,石鲈属,系统发育,S7核糖体蛋白基因

Full-Text   Cite this paper   Add to My Lib

Abstract:

基于核DNA分子标记S7核糖体蛋白基因内含子1部分序列对分布于南海及美洲,非洲,大洋洲等周边海区的石鲈属鱼类11种,结合石鲈亚科其他属如仿石鲈属,异孔石鲈属,八带石鲈属及锯鳃石鲈属等21种鱼类的系统进化关系进行了研究分析。利用最大简约法以及贝叶斯法构建了系统进化树。进化树上,石鲈属的种类并没有形成一个单系,除了大斑石鲈,断斑石鲈等6种石鲈属鱼类聚成一石鲈属的分支外,其他石鲈属种类都位于进化树的不同位置。侧扁石鲈与八带石鲈聚在一起,大棘石鲈与异孔石鲈属聚在一起。红海石鲈与纵带石鲈与仿石鲈属的种类关系较近,佩氏石鲈最先分化出来,位于整个石鲈亚科分支基部。该分类关系与其各自的地理分布情况有着一定的联系。

References

[1]  陈兴强,张建生.石鲈科鱼类苗种繁育和良种选育技术[J].海洋与渔业,2011(1): 47-48.
[2]  叶金聪.断斑石鲈(Pomadasy hasta)网箱养殖技术研究[J].福建水产,2007(1): 51-54.
[3]  Johnson G D. The limits and relationships of the Lutjanidae and associated families[M].Bulletin of Scripps Institution of Oceanography,1980,24: 1-111.
[4]  Nelson J S. Fishes of the World [M]. New York:John Wiley&Sons INC,1994: 360-361.
[5]  Froese R,Pauly D. FishBase. World Wide Web Electronic Publication www.fishbase.org,version (08/2011). 2011.
[6]  成庆泰,郑葆珊.中国鱼类系统检索[M].北京:科学出版社,1987:339-341.
[7]  沈世杰.台湾鱼类志[M].台北:台湾大学动物学系出版,1993:360-363.
[8]  孟庆闻,苏锦祥,缪学祖.鱼类分类学[M].北京:中国农业出版社,1995:636-640,696-700,711-713.
[9]  朱世华,郑文娟,邹记兴,等.5种石鲈科鱼类细胞色素b基因序列及分子系统分析[J].热带海洋学报,2006,25(4): 42-45.
[10]  梁日深,杨国华,罗大极,等. 基于S7核糖体蛋白基因部分序列的10种石鲈科鱼类的系统发育关系[J].热带海洋学报,2010,29(5):98-102.
[11]  王宁,陈润生.基于内含子和外显子的系统发育分析的比较[J].科学通报,1999,44: 2095-2102.
[12]  Schelly R,Salzburger W. Phylogenetic relationships of the lamprologine cichlid genus Lepidiolamprologus (Teleostei:Perciformes) based on mitochondrial and nuclear sequences,suggesting introgressive hybridization [J]. Mol Phylogenet Evol,2006,38: 426-438.
[13]  Bernardi G,Alva-Campbell Y R,Gasparini J L,et al. Molecular ecology,speciation,and evolution of the reef fish genus Anisotremus[J]. Mol Phylogenet Evol,2008,48: 929-935.
[14]  Chow S,Hazama K. Universal PCR primers for S7 ribosomal protein gene introns in fish [J]. Mol Ecol,1987,7:1255-1256.
[15]  Thompson J D,Higgins D G,Gibson T J. Clusial W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting,position specific gap penalties and weight matrix choice [J]. Nucleic Acids Res,1994,22(22): 4673-4680.
[16]  Tamura K,Dudley J,Nei M,et al. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0 [J]. Mol Biol Evol,2007,24:1596-1599.
[17]  Huelsenebck J P,Ronquist F. MrBayes: Bayesian inference of Phylogeny [J]. Bioinformatics,2001,17: 754-755.
[18]  Ronquist F,Huelsenbeck J P. MrBayes 3: Bayesian phylogenetic inference under mixed models[J]. Bioinformatics,2003,19: 1572-1574.
[19]  Knight A,Mmindell D P. Substitutions bias,weighting of DNA sequence evolution,and the phylogenetic positions of fea\'s viper[J]. Syst Biol,1993,42(1): 18-31.
[20]  陈晓芳,王翔,袁晓东,等.鸻形目12种鸟类线粒体细胞色素b基因序列差异及其系统发育关系[J].遗传学报,2003,30(5):419-424.
[21]  任岗,章群,钱开诚,等.12种石鲈科鱼类线粒体16S rRNA基因的部分序列分析[J]. 热带海洋学报,2007,26(3): 48-52.
[22]  任岗,章群.石鲈科鱼类的系统发育分析兼论髭鲷属的分类地位[J].动物分类学报,2007,32(4): 835-841.
[23]  Near T J,Cheng C-H C. Phylogenetics of notothenioid fishes (Teleostei: Acanthomorpha): Inferences from mitochondrial and nuclear gene sequences [J]. Mol Phylogenet Evol,2008,47: 832-840.
[24]  Piller K R,Bart JR H L,Hurley D L. Phylogeography of the greenside darter complex,Etheostoma blennioides (Teleostomi: Percidae): A wide-ranging polytypic taxon[J]. Mol Phylogenet Evol,2008,46: 974-985.
[25]  Lopez-Fernandez H,Winemiller K O,Honeycutt R L. Multilocus phylogeny and rapid radiations in Neotropical cichlid fishes(Perciformes: Cichlidae: Cichlinae)[J]. Mol Phylogenet Evol,2010,55: 1070-1086.
[26]  Levy A,Wirtz P,Floeter S R,et al. The Lusitania Province as a center of diversification: The phylogeny of the genus Microlipophrys (Pisces: Blenniidae)[J]. Mol Phylogenet Evol. 2011,58: 409-413.
[27]  王绪桢,何舜平,陈宜瑜. S7核糖体蛋白基因序列变异及其在低等鲤科鱼类中的系统发育意义[J].科学通报,2002,47(14): 1089-1094.
[28]  宋林,肖永双,高天翔.S7核糖体蛋白基因片段序列变异与花鲈属鱼类系统发育研究[J].海洋湖沼通报,2008,(2):152-158.
[29]  Sambrook J,Fritsch E F,Maniatis T. Molecular Cloning: A Laboratory Manual (3ed) [M]. New York:Cold Spring Harbor Laboratory Press,2001:138-153.
[30]  Rocha L A,Lindeman K C,Rocha C R.Historical biogeography and speciation in the reef fish genus Haemulon (Teleostei: Haemulidae) [J]. Mol Phylogenet Evol,2008,48: 918-928.
[31]  Mckay R J. Haemulidae[M]//Fischer W,Bianchi G. FAO Species Identification Sheets for Fishery Purposes. Western Indian Ocean (Fishing Area 51). Vol. 2. FAO,Rome,1984.
[32]  Mckay R J. Haemulidae (=Pomadasyidae). Grunts (also sweetlips,rubberlips,hotlips,and velvetchins)[M]//Carpenter K E,Niem V H. The lIVING MARINE RESOURCES of the Western Central Pacific. Volume 5. Rome: FAO,2001: 2961-2989.
[33]  Minegishi Y,Aoyama J,Inoue J,et al. Molecular phylogeny and evolution of the freshwater eels genus Anguilla based on the whole mitochondrial genome sequences[J]. Mol Phylogenet Evol,2005,34(1): 134-146.
[34]  Miller T L,Cribb T H. Phylogenetic relationships of some common Indo-Pacific snappers (Perciformes: Lutjanidae) based on mitochondrial DNA sequences,with comments on the taxonomic position of the Caesioninae[J]. Mol Phylogenet Evol,2007,44: 450-460.

Full-Text

Contact Us

service@oalib.com

QQ:3279437679

WhatsApp +8615387084133