LU Ya-hai, CONRAD R. In situ stable isotope probing of methanogenic archaea in the rice rhizosphere [J]. Science, 2005, (5737):1088-1090.
[2]
LU Ya-hai, LUEDERS T, FRIEDRICH M W. Detecting active methanogenic populations on rice roots using stable isotope probing [J]. Environmental Microbiology, 2005(3):326-336.
[3]
DUMONT M G, RADAJEWSKI S M, MIGUEZ C B. Identification of a complete methane monooxygenase operon from soil by combining stable isotope probing and metagenomic analysis [J]. Environmental Microbiology, 2006(7):1240-1250.doi:10.1111/j.1462-2920.2006.01018.x.
HANDELSMAN J. Metagenomics:Application of genomics to uncultured microorganisms [J]. Microbiology and Molecular Biology Reviews, 2004(4):669-685.doi:10.1128/MMBR.68.4.669-685.2004.
[9]
STREIT W R, SCHMITZ R A. Metagenomics:The key to the uncultured microbes [J]. Current Opinion in Biotechnology, 2004(5):492-498.doi:10.1016/j.mib.2004.08.002.
SPIECK E, HARTWIG C, MC CORMACK I. Selective enrichment and molecular characterization of a previously uncultured Nitrospira-like bacterium from activated sludge [J]. Environmental Microbiology, 2006(3):405-415.doi:10.1111/j.1462-2920.2005.00905.x.
PIRONE L, CHIARINI L, DALMASTRI C. Detection of cultured and uncultured Burkholderia cepacia complex bacteria naturally occurring in the maize rhizosphere [J]. Environmental Microbiology, 2005, (11):1734-1742.doi:10.1111/j.1462-2920.2005.00897.x.
[15]
CHEN Y C, BANKS M K, SCHWAB A P. Microbial degradation of polycylic aromatic hydrocarbons in rhizosphere soil [J]. Abstracts of Papers of the American Chemical Society, 2002.U620.
TRINGE S G, RUBIN E M. Metagenomics:DNA sequencing of environmental samples [J]. Nature Reviews Genetics, 2005, (11):805-814.
[18]
STEELE H L, STREIT W R. Metagenomics:advances in ecology and biotechnology [J]. FEMS Microbiology Letters, 2005(2):105-111.doi:10.1016/j.femsle.2005.05.011.
RONDON M R, AUGUST P R, BETTERMANN A D. Cloning the soil metagenome:A strategy for accessing the genetic and functional diversity of uncultured microorganisms [J]. Applied and Environmental Microbiology, 2000(6):2541-2547.doi:10.1128/AEM.66.6.2541-2547.2000.
BREITBART M, SALAMON P, ANDRESEN B. Genomic analysis of uncultured marine viral communities [J]. Proceedings of the National Academy of Sciences(USA), 2002, (22):14250-14255.doi:10.1073/pnas.202488399.
[25]
FERRARI M D. Biodegradation of polycyclic aromatic hydrocarbons and its application to the bioremediation of contaminated soils and sludges [J]. Revista Argentina De Microbiologia, 1996(2):83-98.
[26]
RANJAN R, GROVER A, KAPARDAR R K. Isolation of novel lipolytic genes from uncultured bacteria of pond water [J]. Biochemical and Biophysical Research Communications, 2005(1):57-65.doi:10.1016/j.bbrc.2005.07.046.
[27]
MESELSON M, STAHL F W. The replication of DNA in Escherichia coli [J]. Proceedings of the National Academy of Sciences, 1958.671-682.doi:10.1073/pnas.44.7.671.
[28]
RADAJEWSKI S, MC DONALDLL R, MURRELL J C. Stable-isotope probing of nucleic acids:A window to the function of uncultured microorganisms [J]. Current Opinion in Biotechnology, 2003(3):296-302.doi:10.1016/S0958-1669(03)00064-8.
[29]
BORODINA E, COX M J, MC DONALD I R. Use of DNA-stable isotope probing and functional gene probes to investigate the diversity of methyl chloride-utilizing bacteria in soil [J]. Environmental Microbiology, 2005(9):1318-1328.
[30]
RADAJEWSKI S, INESON P, PAREKH N R. Stable-isotope probing as a tool in microbial ecology [J]. Nature, 2000, (6770):646-649.doi:10.1038/35001054.
[31]
MPRROS S A, RADAJEWSKI S, WILLISON T W. Identification of the functionally active methanotroph population in a peat soil microcosm by stable-isotope probing [J]. Applied and Environmental Microbiology, 2002(3):1446-1453.doi:10.1128/AEM.68.3.1446-1453.2002.
[32]
WHITBY C B, HALL G, PICKUP R. 13C incorporation into DNA as a means of identifying the active components of ammonia-oxidizer populations [J]. Letters in Applied Microbiology, 2001(6):398-401.doi:10.1046/j.1472-765X.2001.00930.x.
[33]
MANEFIELD M, WHITELEY A S, OATLE N. Technical considerations for RNA-based stable isotope probing:an approach to associating microbial diversity with microbial community function [J]. Rapid Communications in Mass Spectrometry, 2002, (23):2179-2183.doi:10.1002/rcm.782.
[34]
LUEDERS T, POMMERENKE B, FRIEDRICH M W. Stable-isotope probing of microorganisms thriving at thermodynamic limits:Syntrophic propionate oxidation in flooded soil [J]. Applied and Environmental Microbiology, 2004, (10):5778-5786.doi:10.1128/AEM.70.10.5778-5786.2004.
ALIAS Z, TAN I K. Isolation of palm oil-utilising, polyhydroxyalkanoate (PHA)-producing bacteria by an enrichment technique [J]. Bioresource Technology, 2005, (11):1229-1234.doi:10.1016/j.biortech.2004.10.012.
[37]
BATISTA S B, MOUNTEER A H, AMORIM F R. Isolation and characterization of biosurfactant/bioemulsifier-producing bacteria from petroleum contaminated sites [J]. Bioresource Technology, 2006(6):868-875.doi:10.1016/j.biortech.2005.04.020.
[38]
SINGH A, WARD O P, VARMA A. Biodegradation and Bioremediation [M]. Berlin Heidelberg:Springer-Verlag, 2004.309.
