OALib Journal期刊
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蛋白质中二硫键的定位及其质谱分析*
, PP. 975-983
Keywords: 二硫键定位,质谱,串联质谱,三羧乙基膦,稳定同位素标记
Abstract:
二硫键是一种常见的蛋白质翻译后修饰,对稳定蛋白质的空间结构,保持及调节其生物活性等都有着非常重要的作用。因此,确定二硫键在蛋白质中的位置是全面了解含二硫键蛋白化学结构的重要方面。在众多实验方法中,现代质谱技术因其操作简单、快速、灵敏等优点而成为分析二硫键的重要手段。本文介绍了目前主要的定位二硫键的方法,以及质谱在二硫键定位分析中的应用与进展。
References
[1] | [ 1 ] Thornton J M. J . Mol . Biol . , 1981 , 151 : 261 —287
|
[2] | [ 4 ] Matsumura M, Signor G, Matthews B W. Nature , 1989 , 342 :291 —293
|
[3] | [ 5 ] Wedemeyer W J , Welker E , Narayan M, Scheraga H A.Biochemistry , 2000 , 39 : 4207 —4216
|
[4] | [ 6 ] Pitt J J , da Silva E , Gorman J J . J . Biol . Chem. , 2000 , 275 :6469 —6478
|
[5] | [ 7 ] Harrison P M, Sternberg M J E. J . Mol . Biol . , 1994 , 244 :448 —463
|
[6] | Chuang C C , Chen C Y, Yang J M, et al . Proteins , 2003 , 53 :1 —5
|
[7] | Scoble H A , Martin S A. Methods Enzymol . , 1990 , 193 : 519 —536
|
[8] | Baneyx F , Mujacic M. Nat . Biotechnol . , 2004 , 22 : 1399 —1408
|
[9] | Jones T A , Kjeldgaard M. Methods Enzymol . , 1997 , 277 : 173 —208
|
[10] | Ryle A P , Sanger F , Smith L F , Kitai R. Biochem. J . , 1955 ,60 : 541 —556
|
[11] | Hirs C H W. Methods Enzymol . , 1967 , 11 : 475 —478
|
[12] | Yazdanparast R , Andrews P C , Smith D L , Dixon J E. J . Biol .Chem. , 1987 , 262 : 2507 —2513
|
[13] | Zhou Z , Smith D L. J . Protein Chem. , 1990 , 9 : 523 —532
|
[14] | Zhou Z , Smith D L. Biomed. Environ. Mass Spectrom. , 1990 ,19 : 782 —786
|
[15] | Hoeprich P D , Doolittle R F. Biochemistry , 1983 , 22 : 2049 —2055
|
[16] | Nishiuchi Y, Kumagaye K, Noda Y, Biopolymers , 1986 , 25(suppl . ) : S61 —S68
|
[17] | Cosena L , Sweeney E , Murphy J R. J . Biol . Chem. , 1997 , 272(52) : 32995 —33000
|
[18] | Jones M D , Patterson S D , Lu H S. Anal . Chem. , 1998 , 70 :136 —143
|
[19] | Yen T Y, Joshi R K, Yan H , et al . J . Mass Spectrom. , 2000 ,35 : 990 —1002
|
[20] | Cole A R , Hall N E , Treutlein H R , Eddes J S , Reid G E ,Moritz R L , Simpson R J . J . Biol . Chem. , 1999 , 274 : 7207 —7215
|
[21] | Holmes E H , Yen T Y, Thomas S , Joshi R , Nguyen A , Long T ,Gallet F , Maftah A , Julien R , Macher B A. J . Biol . Chem. ,2000 , 275 : 24237 —24245
|
[22] | Hart P J , Deep S , Taylor A B , et al . Nat . Struct . Biol . , 2002 ,9 : 203 —208
|
[23] | Akashi S , Hirayama K, Seino T , et al . Biomed. Environ. Mass Spectrom. , 1988 , 15 : 541 —546
|
[24] | Andrews P C , Villafranca J L. Current Research in Protein Chemistry. San Diego , CA: Academic Press , 1990. 95 —102
|
[25] | Crimmins D L , Saylor M, Rush J , Thoma R S. Anal . Biochem. ,1995 , 226 : 355 —361
|
[26] | Wu J , Gage D A , Watson J T. Anal . Biochem. , 1996 , 235 :161 —174
|
[27] | Gray W R. Protein Sci . , 1993 , 2 : 1749 —1755
|
[28] | Li F , Liang S P. Peptides , 1999 , 20 : 1027 —1034
|
[29] | 赵听友(Zhao T Y) , 曹瑛(Cao Y) , 范崇旭(Fan C X) . 化学学报(Acta Chimica Sinica) , 2005 , 63(2) : 163 —168
|
[30] | Van den Hooven H W, van den Burg H A , Vossen P , et al .Biochemistry , 2001 , 40 : 3458 —3466
|
[31] | Katsumi A , Tuley E A , Bodo I. J . Biol . Chem. , 2000 , 275 :25585 —25594
|
[32] | Bures E J , Hui J O , Young Y, et al . Biochemistry , 1998 , 37 :12172 —12177
|
[33] | Burns J A , Butler J C , Moran J , Whitesides G M. J . Org.Chem. , 1991 , 56 : 2648 —2650
|
[34] | Barber M, Bordoli R S , Sedgwick R D , Tyler A N. J . Chem.Soc. Chem. Commun. , 1981 , 325 —327
|
[35] | Torgerson D F , Skowronski R P , Macfarlane R D. Biochem.Biophys. Res. Commun. , 1974 , 60 : 616 —621
|
[36] | H? kansson P , Kamensky I , Sundqvist B , Fohlman J , Petersen P ,McNeal C J , Macfarlane R D. J . Am. Chem. Soc. , 1982 , 104 :2948 —2949
|
[37] | Sundqvist B , Roepstorff P , Fohlman J , et al . Science , 1984 ,696 —698
|
[38] | Chait B T , Field F H. Biochem. Biophys. Res. Commun. ,1986 , 134 : 420 —426
|
[39] | Fenn J B , Mann M, Meng C K, Wong S F , Whitehouse C M.Science , 1989 , 246 : 64 —71
|
[40] | Fenn J B , Mann M, Meng C K, Wong S F , Whitehouse C M.Mass Spectrom. Rev. , 1990 , 9 : 37 —41
|
[41] | Karas M, Bachmann D , Bahr U , Hillenkamp F. Int . J . Mass Spectrom. Ion. Process. , 1987 , 78 : 53 —68
|
[42] | Karas M, Hillenkamp F. Anal . Chem. , 1988 , 60 : 2299 —2301
|
[43] | Hillenkamp F , Karas M, Beavis R C. Anal . Chem. , 1991 , 63 :1193A —1203A
|
[44] | Tanaka K, Waki H , Ido Y, Akita S , Yoshida Y, Yoshida T.Rapid Commun. Mass Spectrom. , 1988 , 2 : 151 —153
|
[45] | Vestal M L , Juhasz P , Martin S A. Rapid Commun. Mass Spectrom. , 1995 , 9 : 1044 —1050
|
[46] | Burlingame A L , Boyd R K, Gaskell S J . Anal . Chem. , 1998 ,70 : 647R —716R
|
[47] | Mhatre R , Woodard J , Zeng C. Rapid Commun. Mass Spectrom. , 1999 , 13 : 2503 —2510
|
[48] | Zhang W, Marzilli L A , Jason C , et al . Analytical Biochemistry ,2002 , 311 : 1 —9
|
[49] | Wold F. Methods Enzymol . , 1972 , 25 : 623 —651
|
[50] | Peters K, Richards F M. Annu. Rev. Biochem. , 1977 , 46 :523 —551
|
[51] | Zubarev R A , Kruger N A , Fridriksson E K. J . Am. Chem.Soc. , 1999 , 121 : 2857 —2862
|
[52] | Ge Y, Lawhorn B G, ElNaggar M, et al . J . Am. Chem. Soc. ,2002 , 124 : 672 —678
|
[53] | Kelleher N L. Chem. Biol . , 2000 , 7 : R37 —R45
|
[54] | Patterson S D , Katta V. Anal . Chem. , 1994 , 66 : 3727 —3732
|
[55] | Qiu X Y, Cui M, Liu S Y, et al . Rapid Commun. Mass Spectrom. , 2007 , 21(21) : 3520 —3525
|
[56] | Qi J , Wu W, Watson J T , et al . J . Am. Soc. Mass Spectrom. ,2003 , 14 : 1032 —1038
|
[57] | Qin J , Chait B T. Anal . Chem. , 1997 , 69 : 4002 —4009
|
[58] | FenyêD. Comput . Appl . Biosci . , 1997 , 13 : 617 —618
|
[59] | Thevis M, Loo R R O , Loo J A. J . Am. Soc. Mass Spectrom. ,2003 , 14 : 635 —647
|
[60] | Chalkley R J , Baker P R , Huang L. Molecular and Cellular Proteomics , 2005 , 4 : 1194 —1204
|
[61] | Schnaible V , Wefing S , Bücker A , et al . Anal . Chem. , 2002 ,74 : 2386 —2393
|
[62] | Schilling B , Row R H , Gibson B W, et al . J . Am. Soc. Mass Spectrom. , 2003 , 14 : 834 —850
|
[63] | Li F , Liang S P. Peptides , 1999 , 20 : 1027 —1034
|
[64] | Gorman J J , Wallis T P , Pitt J J . J . Mass Spectrom. Rev. ,2002 , 21 : 183 —216
|
[65] | Poerio E , Caporale C , Carrano L , Pucci P , Buonocore V. Eur.J . Biochem. , 1991 , 99 : 595 —600
|
[66] | Vaccaro A M, Salvioli R , Barca A , et al . J . Biol . Chem. ,1995 , 270 : 9953 —9960
|
[67] | Hodder A N , Crewther P E , Matthew M L , et al . J . Biol .Chem. , 1996 , 271 : 29446 —29452
|
[68] | Calvete J J , Schrader M, Raida M, et al . FEBS Lett . , 1997 ,416 : 197 —202
|
[69] | Sparrow L G, McKern N M, Gorman J J , et al . J . Biol . Chem. ,1997 , 272 : 29460 —29467
|
[70] | Cole A R , Hall N E , Treutlein H R , et al . J . Biol . Chem. ,1999 , 274 : 7207 —7215
|
[71] | Moritz R L , Hall N E , Connolly L M, Simpson R J . J . Biol .Chem. , 2001 , 276 : 8244 —8253
|
[72] | Chong J M, Bren A , Speicher D W. J . Biol . Chem. , 2002 ,277 : 5134 —5144
|
[73] | Tie J K, Mutucumarana V P , Stafford D W, et al . J . Biol .Chem. , 2003 , 278 : 45468 —45475
|
[74] | Barrientos L G, Martin A M, Sanchez A , et al . Biochem.Biophys. Res. Commun. , 2004 , 323 : 696 —702
|
[75] | Wallis T P , Huang C Y, Gorman J J , et al . J . Biol . Chem. ,2004 , 279 : 20729 —20741
|
[76] | Wagner L A , Ohnuki L E , Parsawar K, et al . Protein Journal ,2007 ,26 : 13 —18
|
[77] | [ 2 ] Creighton T E. Bioessays , 1988 , 8 : 57 —63
|
[78] | [ 3 ] Pace C N , Grimsley G R , Thomson J A , Barnett B J . J . Biol .Chem. , 1988 , 263 : 11820 —11825
|
[79] | [ 8 ] Abkevich V I , Shakhnovich E I. J . Mol . Biol . , 2000 , 300 :975 —985
|
[80] | [ 9 ] Mitchison C , Wells J A. Biochemistry , 1989 , 28 : 4807 —4815
|
[81] | Jeffrey W N , Thomas E C. Biochemistry , 1994 , 33 : 5974 —5983
|
[82] | Haniu M, Acklin C , Kenney W C , Rohde M F. Int . J . Pept .Protein Res. , 1994 , 43 : 81 —86
|
[83] | Klaus W, Broger C , Gerber P , Senn H. J . Mol . Biol . , 1993 ,232 : 897 —906
|
[84] | Ryle A P , Sanger F. Biochem. J . , 1955 , 60 : 535 —540
|
[85] | Spackman D H , Stein W H , Moore S. J . Biol . Chem. , 1960 ,235 : 648 —659
|
[86] | Sanger F. Nature , 1953 , 171 : 1025 —1026
|
[87] | Sanger F. Science , 1959 , 129 : 1340 —1344
|
[88] | Brown J R , Hartley B S. Biochem. J . , 1966 , 101 : 214 —228
|
[89] | Morris H R , Pucci P. Biochem. Biophys. Res. Commun. ,1985 , 126 : 1122 —1128
|
[90] | Smith D L , Zhou Z. Methods Enzymol . , 1990 , 193 : 374 —389
|
[91] | Bauer M, Sun Y, Degenhardt C , Kozikowski B. J . Protein Chem. , 1993 , 12 : 759 —764
|
[92] | Bordini E , Hamdan M, Righetti P G. Rapid Commun. Mass Spectrom. , 1999 , 13 : 1818 —1827
|
[93] | Nishiuchi Y, Sakakibara S. FEBS Lett . , 1982 , 148 : 260 —262
|
[94] | Shimonishi Y, Hidaka Y, Koizumi M. FEBS Lett . , 1987 , 215 :165 —170
|
[95] | Iahimizu T , Norioka S , Kanai M, Clarke A E , Sakiyama F. Eur.J . Biochem. , 1996 , 242 : 627 —635
|
[96] | Glocker M O , Arbogast B , Deinzer M L. J . Am. Soc. Mass Spectrom. , 1995 , 6 : 638 —643
|
[97] | Fadel V , Bettendorff P , Herrmann T , et al . Toxicon , 2005 , 46 :759 —767
|
[98] | Carr C , Aykent S , Kimack N M, Levine A D. Biochemistry ,1991 , 30 : 1515 —1523
|
[99] | Kallestad J C , Shoyab M, Linsley P S. J . Biol . Chem. , 1991 ,266 : 8940 —8945
|
[100] | Stewart A E , Raffioni S , Chaudhary T , Chait B T , Luporini P ,Bradshaw R A. Protein Sci . , 1992 , 1 : 777 —785
|
[101] | Crimmins D L. Pept . Res. , 1989 , 2 : 395 —401
|
[102] | Sandy J D , Flannery C R , Boynton R E , Neame P J . J . Biol .Chem. , 1990 , 265 : 21108 —21113
|
[103] | Gray W R. Protein Sci . , 1993 , 2 : 1732 —1748
|
[104] | Wu J , Watson J T. Protein Sci . , 1997 , 6 : 391 —398
|
[105] | Fischer W H , Rivier J E , Craig A G. Rapid Commun. Mass Spectrom. , 1993 , 7 : 225 —228
|
[106] | Gray W R , Creighton T E. Protein Structure : A Practical Approach. Oxford : IRL Press , 1997. 165 —186
|
[107] | Wu J , Watson J T. Anal . Biochem. , 1998 , 258 : 268 —276
|
[108] | Schutte C G, Lemm T , Glombitza G J , Sandhoff K. Protein Sci . ,1998 , 7 : 1039 —1045
|
[109] | Li J , Yen T Y, Allende ML Jr. J . Biol . Chem. , 2000 , 275 :41476 —41486
|
[110] | Wu J , Watson J T. Methods Mol . Biol . , 2002 , 194 : 1 —22
|
[111] | Qi J , Wu J , Watson J T , et al . Biochemistry , 2001 , 40 : 4531 —4538
|
[112] | Andrews P C , Dixon J E. Anal . Biochem. , 1987 , 161 : 524 —528
|
[113] | Han J C , Han G Y. Anal . Biochem. , 1994 , 220 : 5 —10
|
[114] | Getz E B , Xiao M, Chakrabarty T , Cooke R , Selvin P R. Anal .Biochem. , 1999 , 273 : 73 —80
|
[115] | Gorman J J , Ferguson B L , Nguyen T N. Rapid Commun. Mass Spectrom. , 1996 , 10 : 529 —536
|
[116] | Thomson J J . Rays of Positive Electricity and Their Application to Chemical Analysis. London : Longmans Green , 1913
|
[117] | Chait B T , Field F H. J . Am. Chem. Soc. , 1985 , 107 : 6743 —6744
|
[118] | Takao T , Yoshida M, Hong Y M, Aimoto S , Shimonishi Y.Biomed. Mass Spectrom. , 1984 , 11 : 549 —556
|
[119] | Yazdanparast R , Andrews P , Smith D L , Dixon J E. Anal .Biochem. , 1986 , 153 : 348 —353
|
[120] | Tetsuya S , Kazuo M, Toshikatsu O. FEBS Journal , 2000 , 267 :2380 —2389
|
[121] | Bean M F , Carr S A. Anal . Biochem. , 1992 , 201 : 216 —226
|
[122] | Gorman J J , Ferguson B L , Speelman D , Mills J . Protein Sci . ,1997 , 6 : 1308 —1315
|
[123] | Yen T Y, Macher B A. Method Enzymol . , 2006 , 415 : 103 —113
|
[124] | Yen T Y, Yan H , Macher B A. J . Mass Spectrom. , 2002 , 37 :15 —30
|
[125] | Schnolzer M, Jedrzejewski P , Lehmann W D. Electrophoresis ,1996 , 17 : 945 —953
|
[126] | Rao K C S , Carruth R T , Miyagi M. J . Proteome Res. , 2005 ,4 : 507 —514
|
[127] | Rao K C S , Palamalai V , Miyagi M. Molecular & Cellular Proteomics , 2005 , 4 : 1550 —1557
|
[128] | Wallis T P , Pitt J J , Gorman J J . Protein Sci . , 2001 , 10 :2251 —2271
|
[129] | Traub W, Piez KA. Adv. Protein Chem. , 1971 , 25 : 243 —352
|
[130] | Folk J E , Finlayson J S. Adv. Protein Chem. , 1977 , 31 : 1 —133
|
[131] | Kelleher N L , Lin H Y, Valaskovic GA , et al . J . Am. Chem.Soc. , 1999 , 121 : 806 —812
|
[132] | McLafferty F W, Fridriksson E K, Horn D M. Science , 1999 ,284 : 1289 —1290
|
[133] | Meng F , Cargile B J , Miller L M. Nat . Biotechnol . , 19 : 952 —957
|
[134] | Fukuyama Y, Iwamoto S , Tanaka K. J . Mass Spectrom. , 2006 ,41 : 191 —201
|
[135] | Fagerquist C K. Rapid Commun. Mass Spectrom. , 2004 , 18 :685 —700
|
[136] | Happersberger H P , Bantscheff M, Barbirz S , Glocker M O.Methods Mol . Biol . , 2000 , 146 : 167 —184
|
[137] | Clauser K R , Baker P R , Burlingame A L. Anal . Chem. , 1999 ,71 : 2871 —2882
|
[138] | Aebersold R , Goodlett D R. Chem. Rev. , 2001 , 101 : 269 —295
|
[139] | Chalkley R J , Baker P R , Hansen K C. Molecular and Cellular Proteomics , 2005 , 4 : 1189 —1193
|
[140] | Schnaible V , Wefing S , Resemann A , et al . Anal . Chem. , 2002 , 74 : 4980 —4988
|
[141] | Wefing S , Schnaible V , Hoffmann D. Anal . Chem. , 2006 , 78 :1235 —1241
|
[142] | De Koning L J , Kasper P T , de Jong L , et al . FEBS J . , 2006 ,273 : 281 —291
|
[143] | Klose J , Wendt N , Rothemund S , et al . Protein Sci . , 2004 , 13 :2470 —2475
|
[144] | Lowe E K, Anema S G, Bienvenue A , et al . J . Agric. Food Chem. , 2004 , 52 : 7669 —7680
|
[145] | Back J W, Notenboom V , de Koning L J , et al . Anal . Chem. ,2002 , 74 : 4417 —4422
|
[146] | Zhang D Y, Liang S P. J . Protein Chem. , 1993 , 12 : 735 —740
|
[147] | Peng K, Shu Q , Liang S P , et al . J . Biol . Chem. , 2002 , 277 :47564 —47571
|
[148] | Shu Q , Huang R H , Liang S P. Eur. J . Biochem. , 2001 , 268 :2301 —2307
|
[149] | 刘中华(Liu Z H) , 梁宋平(Liang S P) . 高等学校化学学报(Chemical Journal of Chinese Universities ) , 2003 , 24 ( 10 ) :1815 —1819
|
[150] | 张鹏飞(Zhang P F) , 肖顺勇(Xiao S Y) , 梁宋平(Liang S P) .生物化学与生物物理进展( Prog. Biochem. Biophys. ) ,2004 , 31 (6) : 550 —555
|
[151] | Robertson J G, Adams G W, Medzihradszky K F , et al .Biochem. , 1994 , 33 : 11563 —11575
|
[152] | Gehrig P M, Biemann K. Pept . Res. , 1996 , 9 : 308 —314
|
[153] | Haniu M, Arakawa T , Bures EJ , et al . J . Biol . Chem. , 1998 ,273 : 28691 —28699
|
[154] | Lansmann S , Schuette C G, Sandhoff K, et al . Eur. J .Biochem. , 2003 , 270 : 1076 —1088
|
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