OALib Journal期刊
ISSN: 2333-9721
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压力诱导溶液中蛋白质构象变化的谱学研究
, PP. 2003-2011
Keywords: 压力 ,蛋白质 ,水溶液 ,光谱 ,构象变化 ,聚集
Abstract:
高压诱导蛋白质发生构象变化,引起蛋白质去折叠,并在某种条件下发生聚集,其结果是蛋白质原有的构造被破坏、发生变性。这些过程与蛋白质本身的结构密切相关。同时,折叠中间体结构的揭示对于研究蛋白质去折叠过程也具有重要意义。本文综述了高压诱导下多种谱学方法用于蛋白质构象变化的研究进展,主要包括高压红外光谱、高压荧光光谱及高压小角X射线扫描等多种技术手段在研究中蛋白质构象变化方面所能提供的重要信息,并对相关领域存在的问题及今后的发展作出展望。
References
[1] 王荣民(Wang R M), 朱永峰(Zhu Y F), 何玉凤(He Y F), 李岩(Li Y), 毛崇武(Mao C W), 何乃普(He N P). 化学进展(Progress in Chemistry), 2010, 22: 1952-1963
[2] Timasheff S N. Proc. Natl. Acad. Sci. USA, 2002, 99: 9721- 9726
[3] Chalikian T V. Annu. Rev. Biophys. Biomol. Struct., 2003, 32: 207-235
[4] Zhang J, He H W, Wang Q, Yan Y B. Protein Pept. Lett., 2006, 13: 33-40
[5] Yamamoto T, Tasumi M. J. Mol. Struct., 1991, 242: 235-244
[6] Navon A, Ittah V, Laity J H, Scheraga H A, Haas E, Gussakovsky E E. Biochemistry, 2001, 40: 93-104
[7] Bridgman P W. J. Biol. Chem., 1914, 19: 511-512
[8] Kauzmann W. Nature, 1987, 325: 763-764
[9] Royer C A. Biochim. Biophys. Acta, Protein Struc. Mol. Enzymol., 2002, 1595: 201-209
[10] Hummer G, Garde S, Garcia A E, Paulaitis M E, Pratt L R. Proc. Natl. Acad. Sci. USA, 1998, 95: 1552-1555
[11] Bullock A N, Fersht A R. Nat. Rev. Cancer, 2001, 1: 68-76
[12] Sacchettini J C, Kelly J W. Nat. Rev. Drug. Discov., 2002, 1: 267-275
[13] Horwich A. J. Clin. Invest., 2002, 110: 1221-1232
[14] Day R, Garc A E. Proteins, 2008, 70: 1175-1184
[15] Lima S M, Vaz A C, Souza T L, Peabody D S, Silva J L, Oliveira A C. FEBS J., 2006, 273: 1463-1475
[16] Lima L M, Silva J L. J. Biol. Chem., 2004, 279: 47968-47974
[17] Chatani E, Kato M, Kawai T, Naiki H, Goto Y. J. Mol. Biol., 2005, 352: 941-951
[18] Silva J L, Cordeiro Y, Foguel D. Biochim. Biophys. Acta, 2006, 1764: 443-451
[19] 孙楠(Sun N), 郑海飞(Zheng H F). 地学前缘(Earth Science Frontiers), 2005, 12: 131-136
[20] Li T M, Hook J W, Drickamer H G, Weber G. Biochemistry, 1976, 15: 5571-5580
[21] Samarasinghe S D, Campbell D M, Jonas A, Jonas J. Biochemistry, 1992, 31: 7773-7778
[22] Taniguchi Y, Suzuki K. J. Phys. Chem., 1983, 87: 5185-5193
[23] Smeller L, Meersman F, Heremans K. Eur. Biophys. J., 2008, 37: 1127-1132
[24] Smeller L, Meersman F, Fidy J, Heremans K. Biochemistry, 2003, 42: 553-561
[25] Goosens K, Smeller L, Frank J, Heremans K. Eur. J. Biochem., 1996, 236: 254-262
[26] Goncalves R B, Mendes Y S, Soares M R, Katpally U, Smith T J, Silva J L, Oliveira A C. J. Mol. Biol., 2007, 366: 295-306
[27] Paschek D, Gnanakaran S, Garcia A E. Proc. Natl. Acad. Sci. USA, 2005, 102: 6765-6770
[28] Ladenstein R, Ren B. FEBS J., 2006, 273: 4170-4185
[29] Wu Y Q, Meersman F, Ozaki Y. Macromolecules, 2006, 39: 1182-1188
[30] Scirè A, Pedone E, Ausili A, Saviano M, Baldassarre M, Bertoli E, Bartolucci S, Tanfani F. Mol. BioSyst., 2010, 6: 2015-2022
[31] Imamura H, Isogai Y, Takekiyo T, Kato M. Biochim. Biophys. Acta-Proteins and Proteomics, 2010, 1804: 193-198
[32] Carrier D, Mantsch H H, Wong P T T. Biopolymers, 1990, 29: 837-844
[33] Wedemeyer W J, Welker E, Narayan M, Scheraga H A. Biochemistry, 2000, 39: 4207-4216
[34] Vijay-Kumar S, Bugg C E, Wilkinson K D, Cook W J. Proc. Natl. Acad. Sci. USA, 1985, 82: 3582-3585
[35] Vijay-Kumar S, Bugg C E, Cook W J. J. Mol. Biol., 1987, 194: 531-544
[36] Love S G, Muir T W, Ramage R, Shaw K T, Alexeev D, Sawyer L, Kelly S M, Price N C, Arnolds J E, Mees M P, Mayer R J. Biochem. J., 1997, 323: 727-734
[37] Herberhold H, Winter R. Biochemistry, 2002, 41: 2396-2401
[38] Marabotti A, Ausili A, Staiano M, Scirè A, Tanfani F, Parracino A, Varriale A, Rossi M, D’Auria S. Biochemistry, 2006, 45: 11885-11894
[39] Herberhold H, Royer C A, Winter R. Biochemistry, 2004, 43: 3336-3345
[40] Gekko K, Timasheff S N. Biochemistry, 1981, 20: 4667-4676
[41] Garcia A F, Heindl P, Voigt H, Buttner M, Butz P, Tauber N, Tauscher B, Pfaff E. J. Biol. Chem., 2005, 280: 9842-9847
[42] Kremer W, Kachel N, Kuwata K, Akasaka K, Kalbitzer H R. J. Biol. Chem., 2007, 282: 22689-22698
[43] Timasheff S N. Ann. Rev. Biophys. Biomol. Struct., 1993, 22: 67-97
[44] Kornblatt J A, Kornblatt M J. Biochim. Biophys. Acta, 2002, 1595: 30-47
[45] Trovaslet M, Dallet-Choisy S, Meersman F, Heremans K, Balny C, Legoy M D. Eur. J. Biochem., 2003, 270: 119-128
[46] Panick G, Malessa R, Winter R. Biochemistry, 1999, 38: 6512-6519
[47] Kitahara R, Yamada H, Akasaka K. Biochemistry, 2001, 40: 13556-13563
[48] Herberhold H, Marchal S, Lange R, Scheyhing C H, Vogel R F, Winter R. J. Mol. Biol., 2003, 330: 1153-1164
[49] Balch W E, Morimoto R I, Dillin A, Kelly J W. Science, 2008, 319: 916-919
[50] Ikeuchi Y, Suzuki A, Oota T, Hagiwara K, Tatsumi R, Ito T, Balny C. Eur. J. Biochem., 2002, 269: 364-374
[51] Ruan K C, Xu C H, Li T T, Li J, Lange R, Balny C. Eur. J. Biochem., 2003, 270: 1654-1661
[52] Parsegian V A, Rand R P, Rau D C. Methods Enzymol., 1995, 259: 43-94
[53] Spinozzi F, Carsughi F, Mariani P, Saturni L, Bernstorff S, Cinelli S, Onori G. J. Phys. Chem. B, 2007, 111: 3822-3830
[54] Ortore M G, Spinozzi F, Mariani P, Paciaroni A, Barbosa L R S, Amenitsch H, Steinhart M, Ollivier J, Russo D. J. R. Soc. Interface, 2009, 6: 619-634
[55] 王世霞 (Wang S X), 郑海飞 (Zheng H F). 光谱学与光谱分析(Spectroscopy and Spectral Analysis), 2009, 29: 979-981
[56] Karplus M. Fold. Des., 1997, 2: S69-S75
[57] Frauenfelder H, Sligar S G, Wolynes P G. Science, 1991, 254: 1598-1603
[58] Onuchic J N, Luthey-Schulten Z, Wolynes P G. Annu. Rev. Phys. Chem., 1997, 48: 545-600
[59] Timasheff S N. Annu. Rev. Biophys. Biomol. Struct., 1993, 22: 67-97
[60] Cacace M G, Landau E M, Ramsden J J Q. Rev. Biophys., 1997, 30: 241-277
[61] Takeda N, Kato M, Taniguchi Y. Biochemistry, 1995, 34: 5980-5987
[62] Dzwolak W, Kato M, Taniguchi Y. Biochim. Biophys. Acta Protein Struct. Mol. Enzymol., 2002, 1595: 131-144
[63] Caughey B, Lansbury P T. Ann. Rev. Neurosci., 2003, 26: 267-298
[64] Dobson C M. Philos. Trans. R. Soc. Lond. B Biol. Sci., 2001, 356: 133-145
[65] Winklhofer K F, Tatzelt J, Haass C. EMBO. J, 2008, 2: 336-349
[66] Soto C, Estrada L D. Arch. Neurol., 2008, 65: 184-189
[67] Silva J L, Lima L M, Foguel D, Cordeiro Y. Trends Biochem. Sci., 2008, 33: 132-140
[68] Pappu R V, Wang X, Vitalis A, Crick S L. Arch. Biochem. Biophys., 2008, 469: 132-141
[69] Foguel D, Silva J L. Biochemistry, 2004, 43: 11361-11370
[70] Daniel I, Oger P, Winter R. Chem. Soc. Rev., 2006, 35: 858-875
[71] Senear D F, Tretyachenko-Ladokhina V, Opel M L, Aeling K A, Hatfield G W, Franklin L M, Darlington R C, Ross J B A. Nucleic Acids Res., 2007, 35: 1761-1772
[72] Rocha C B, Suarez M C, Yu A, Ballard L, Sorenson M M, Foguel D, Silva J L. Biochemistry, 2008, 47: 5047-5058
[73] Dirix C, Meersman F, MacPhee C E, Dobson C M, Heremans K. J. Mol. Biol., 2005, 347: 903-909
[74] Cordeiro Y, Kraineva J, Gomes M P B, Lopes M H, Martins V R, Lima L M T R, Foguel D, Winter R, Silva J L. Biophys. J., 2005, 89: 2667-2676
[75] Hawley S A. Biochemistry, 1971, 10: 2436-2442
[76] Royer C A, Hinck A P, Loh S N, Prehoda K E, Peng X, Jonas J, Markley J L. Biochemistry, 1993, 32: 5222-5232
[77] Spain I L, Dunstan D J. J. Phys. E Sci. Instrum., 1989, 22: 923-933
[78] Smeller L, Meersman F, Heremans K. Biochim. Biophys. Acta, 2006, 1764: 497-505
[79] Heremans K, Wong P T T. Chem. Phys. Lett., 1985, 118: 101-104
[80] Mitra L, Hata K, Kono R, Maeno A, Isom D, Rouget J B, Winter R, Akasaka K, Garc-Moreno E B, Royer C A. J. Am. Chem. Soc., 2007, 129: 14108-14109
[81] Goncalves R B, Sanches D, Souza T L, Silva J L, Oliveira A C. Biochemistry, 2008, 47: 3832-3841
[82] Schaeffer R D, Fersht A, Daggett V. Curr. Opin. Struct. Biol., 2008, 18: 4-9
[83] Pedone E, Ren B, Ladenstein R, Rossi M, Bartolucci S. Eur. J. Biochem., 2004, 271: 3437-3448
[84] Okuno A, Kato M, Taniguchi Y. Biochim. Biophys. Acta, 2006, 1764: 1407-1412
[85] Meersman F, Wang J, Wu Y Q, Heremans K. Macromolecules, 2005, 38: 8923-8928
[86] Heremans K, Smeller L. Biochim. Biophys. Acta, 1998, 1386: 353-370
[87] D’Auria S, Moracci M, Febbraio F, Tanfani F, Nucci R, Rossi M. Biochimie, 1998, 80: 949-957
[88] Imamura H, Kato M. Proteins, 2009, 75: 911-918
[89] Sarupria S, Ghosh T, Garcia A E, Garde S. Proteins, 2010, 78: 1641-1651
[90] Meersman F, Heremans K. Biochemistry, 2003, 42: 14234-14241
[91] Yan Y B, Jiang B, Zhang R Q, Zhou H M. Protein Sci., 2001, 10: 321-328
[92] Meersman F, Heremans K. Biophys. Chem., 2003, 104: 297-304
[93] Cordeiro Y, Kraineva J, Winter R, Silva J L. Braz. J. Med. Biol. Res., 2005, 38: 1195-1201
[94] Eftink M R, Shastry M C R. Methods Enzymol., 1997, 278: 258-286
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