Fred A L N, Leit？o J M N. Partitional vs hierarchical clustering using a minimum grammar complexity approach[J]. Advances in Pattern Recognition, 2000(1876): 193.
[2]
Agrawal R,Srikant R.Fast algorithms for mining association rules .San Jose: In Proceeding of the 20th International Conference on Very Large Databases, 1994:487.
[3]
Lusis A J, Fogelman A M, Fonarow G C. Genetic basis of atherosclerosis:Part I: new genes and pathways[J]. Circulation,2004,110:1868.
Yildirim M A, Goh K I ,Cusick M E, et al. Drug-target network[J]. Nat Biotechnol, 2007 , 25:1119.
[9]
Yamanishi Y, Araki M, Gutteridge A, et al. Prediction of drug-target interaction network from the integration of chemical and genomic spaces[J]. Bioinformatics,2008, 24:232.
[10]
Wu X, Jiang R, Zhang M Q, et al. Network-based global inference of human disease genes[J]. Mol Sys Biol,2008, 4:189.
[11]
Hopkins A L. Network pharmacology: the next paradigm in drug discovery[J]. Nat Chem Biol,2008, 4(11):682.
Stark C, Breitkreutz B J, Chatr-Aryamontri A, et al. The bioGRID interaction database:2011 update[J]. Nucleic Acids Res, 2011, 39(supp1): 698.
[14]
Kerrien S, Aranda B, Breuza L, et al .The IntAct molecular interaction database in 2012[J].Nucleic Acids Res, 2012, 40:841.
[15]
Keshava Prasad T S, Goel R, Kandasamy K, et al. Human protein reference database-2009 Update[J]. Nucleic Acids Res, 2009, 37: 767.
[16]
von Mering C, Jensen L J, Snel B, et al. STRING: known and predicted protein-protein associations, integrated and transferred across organisms[J]. Nucleic Acids Res,2005, 33:433.
[17]
Mostafavi S, Ray D, Warde-Farley D, et al. GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function[J]. Genome Biology,2008, 9(S1):4.
[18]
Hamosh A, Scott A F, Amberger J S, et al. Online mendelian inheritance in man (OMIM), a knowledgebase of human genes and genetic disorders[J]. Nucleic Acids Res,2005, 33: 514.
[19]
Bruford E A, Lush M J, Wright M W, et al.The HGNC database in 2008: a resource for the human genome[J].Nucleic Acids Res,2008, 36:445.
[20]
Kanehisa M, Goto S, Furumichi M, et al. KEGG for representation and analysisof molecular networks involving diseases and drugs[J]. Nucleic Acids Res,2010, 38: 355.
[21]
Wang Y, Xiao J, Suzek T O, et al. PubChem: a public information system for analyzing bioactivities of small molecules[J]. Nucleic Acids Res,2009, 37:623.
[22]
Godden J W, Xue L, Bajorath J, et al. Combinatorial preferences affect molecular similarity/diversity calculations using binary fingerprints and tanimoto coefficients[J]. J Chem Inf Comput Sci,2000, 40(1):163.
[23]
Dantzig G B. On the shortest route through a network [J]. Management Sci,1960, 6(2):187.
[24]
Marques J P, Written Wu, Y F Trans. Pattern recognition concepts, methods and applications[M]. 2nd edition, Beijing: Tsinghua University Press, 2002:51.
