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棉花学报  2013 

棉花纤维品质性状QTL的元分析

DOI: 1002-7807(2013)06-0503-07, PP. 503-509

Keywords: 棉花,纤维品质性状,QTL,元分析

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Abstract:

通过整合本试验室由陆地棉中棉所8号和海岛棉Pima90-53组配的BC1和BC1F2两个群体的92个纤维品质性状相关的QTLs,构建了1张包含BC1和BC1F2群体63个纤维品质相关性状QTL的整合图谱。整合图谱包含599个标记位点,覆盖全基因组3571.9cM,标记间平均距离为5.96cM,包含26条染色体。采用元分析Bio-Mercator2.1软件的Meta-analysis功能,在12条染色体上共获得15个与纤维品质性状相关的一致性QTLs,其中染色体9、16和24上呈现QTL成簇聚集现象。染色体9上整合来源于2个群体的5个QTLs,获得1个Meta-QTL9-1,所解释的表型变异为17.16%;染色体16上整合来源于两个群体的10个QTLs,获得1个Meta-QTL16-1,所解释的表型变异为12.28%;染色体24上整合来源于2个群体的9个QTLs,获得3个Meta-QTL,分别解释的表型变异为16.12%、16.69%和18.27%;其他染色体均整合来源于2个QTLs,分别获得1个Meta-QTL。研究结果表明,这些一致性QTL在很大程度上可以推动QTL精细定位和分子标记辅助选择在育种实践中的应用。

References

[1]  项时康, 余 楠, 胡育昌, 等. 论我国棉花质量现状[J]. 棉花学报, 1999, 11(1): 1-10.
[2]  XIANG Shi-kang, YU nan, HU Yu-chang, et al. The present status of cotton quality in China[J]. Cotton Science, 1999, 11(1): 1-10.
[3]  RUDNER L M, Glass G V, Evartt D L, et al. A user’s guide to the meta-analysis of research studies. Meta-stat: software to aid in the meta-analysis of research findings[M]. Washington, DC: ERIC Clearinghouse on Assessment and Evaluation, 1129 Shriver Laboratory, University of Maryland, College Park, 2002 : 246.
[4]  BELKNAP J K, Atkins A L. The replicability of QTL for murine alcohol preference drinking behavior across eight independent studies[J]. Mamm Genome, 2001, 12(12): 893-899.
[5]  ARCADE A, Labourdette A, Falque M, et al. Biomercator: integrating genetic maps and QTL towards discovery of candidate genes[J]. Bioinformatics, 2004, 20(14): 2324-2326.
[6]  GOFFINET B, Gerber S. Quantitative trait loci: a meta-analysis[J]. Genetics, 2000, 155(1): 463-473.
[7]  CHARDON F, Virlon B, Moreau L, et al. Genetic architecture of flowering time in maize as inferred from quantitative trait loci meta-analysis and synteny conservation with the rice genome[J]. Genetics, 2004, 168(4): 2169-2185.
[8]  HANOCQ E, Laperche A, Jaminon O, et al. Most significant genome regions involved in the control of earliness traits in bread wheat, as revealed by QTL meta-analysis[J]. Theoretical and Applied Genetics, 2007, 114(3): 569-584.
[9]  齐照明,孙亚男,陈立君,等. 基于Meta分析的大豆百粒重的QTLs定位[J]. 中国农业科学, 2009,42(11):3795-3803.
[10]  QI Zhao-ming, Sun Ya-nan, Chen Li-jun, et al. Meta-analysis of 100-seed weight QTLs in soybean[J]. Scientia Agricultura Sinica, 2009, 42(11): 3795-3803.
[11]  吴 琼,齐照明,刘春燕,等. 基于元分析的大豆生育期QTL的整合[J]. 作物学报,2009,35(8):1418-1424.
[12]  WU Qiong, Qi Zhao-ming, Liu Chun-yan, et al. An integrated QTL map of growth stage in soybean [Glycine max (L.) Merr.]: constructed through meta-analysis[J]. Acta Agronomic Sinica, 2009, 35(8): 1418-1424.
[13]  王帮太,吴建宇,丁俊强,等. 玉米产量及产量相关性状QTL的图谱整合[J]. 作物学报,2009,35(10):1836-1843.
[14]  WANG Bang-tai, Wu Jian-yu, Ding Jun-qiang, et al. Map integration of QTLs for grain yield and its related traits in maize[J]. Acta Agronomic Sinica, 2009, 35(10): 1836-1843.
[15]  毛双林. 小麦重要性状QTL元分析及光和功能与耐湿性QTL定位[D]. 四川雅安:四川农业大学,2010 :1-128.
[16]  MAO Shuang-lin. Meta-analysis for some important traits and QTL analysis for photosynthesis and waterlogging tolerance in wheat[D]. Yaan, Sichuan : Sichuan Agricultural University, 2010 : 1-128.
[17]  DARVASI A, Soller M. A simple method to calculate resolving power and confidence interval of QTL map location[J]. Behavior Genetics, 1997, 27(2): 125-132.
[18]  WANG Yi, Yao Ji, Zhang Zheng-Feng, et al. The comparative analysis based on maize integrated QTL map and meta-analysis of plant height QTLs[J]. Chinese Science Bulletin, 2006, 51(18): 1776-1786.
[19]  王义青,李俊文,石玉真,等. 陆地棉高品质品系纤维品质性状QTL的分子标记及定位[J]. 棉花学报, 2010,22(6): 533-538.
[20]  WANG Yi-qing, Li Jun-wen, Shi Yu-zhen, et al. Molecular marker of QTL for fiber quality traits in upland cotton with elite fiber quality[J]. Cotton Science, 2010, 22(6): 533-538.
[21]  王 琳, 刘 方, 黎绍惠, 等. 鲁棉研15号纤维品质性状QTL定位研究[J]. 棉花学报, 2012, 24(2): 97-105.
[22]  WANG Lin, Liu Fang, Li Shao-hui, et al. QTL mapping for fiber quality properties in Lumianyan 15[J]. Cotton Science, 2012, 24(2): 97-105.
[23]  姚金波, 陈 伟, 张永山, 等.利用重组自交系定位棉花第22染色体短臂的纤维品质性状的QTL[J]. 棉花学报, 2013,25(1): 24-29.
[24]  YAO Jin-bo, Chen Wei, Zhang Yong-shan, et al. QTL mapping of fiber quality traits for elite hybrid derived-RILs on chromosome 22sh in cotton[J]. Cotton Science, 2013,25(1): 24-29.
[25]  ZHAO H X, Liu X M, Chen M S. H22, a major resistance gene to the Hessian fly (Mayetiola destructor), is mapped to the distal region of wheat chromosome 1DS[J]. Theoretical and Applied Genetics, 2006, 113(8): 1491-1496.
[26]  李雪华,李新海,郝转芳,等. 干旱条件下玉米耐旱相关性状的QTL一致性图谱构建[J]. 中国农业科学,2005,38(5): 882-890.
[27]  LI Xue-hua, Li Xin-hai, Hao Zhuan-fang, et al. Consensus map of the QTL relevant to drought tolerance of maize under drought conditions[J]. Scientia Agricultura Sinica, 2005, 38(5): 882-890.
[28]  SARFATTI M, Abu-Abied M, Katan J, et al. RFLP mapping of I1, a new locus in tomato conferring resistance against Fusarium oxysporum f. sp. lycopersici race1[J]. Theoretical and Applied Genetics, 1991, 82(1): 22-26.
[29]  VANDER B J G, Verkerk R, Zabel P, et al. Mapping strategy for resistance genes in tomato based on RFLPs between cultivars: Cf9 (resistance to Cladosporium fulvum) on chromosome1[J]. Theoretical and Applied Genetics, 1992, 84(1/2): 106-112.
[30]  KOSACK K E, Jones J D G. Plant disease resistance genes: Unraveling how they work[J]. Canadian Journal of Botany, 1995, 73(S1): 495-505.
[31]  WITSENBOER H, Kesseli R V, Fortin M G, et al. Sources and genetic structure of a cluster of genes for resistance to three pathogens in lettuce[J]. Theoretical and Applied Genetics, 1995, 91(1): 178-188.
[32]  RONG J K, Feltus F A, Waghmare V N, et al. Meta-analysis of polyploid cotton QTL shows unequal contributions of subgeno- mes to a complex network of genes and gene clusters implicated in lint fiber development[J]. Genetics, 2007, 176 (4): 2577-2588.
[33]  LACAPE J M, Liewellyn D, Jacobs J, et al. Meta-analysis of cotton fiber quality QTLs across diverse environments in a Gossypium hisutum × G. barbadense RIL population[J]. BMC Plant Biology, 2010, 10: 132-156. 

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