全部 标题 作者
关键词 摘要

OALib Journal期刊
ISSN: 2333-9721
费用:99美元

查看量下载量

相关文章

更多...
菌物学报  2015 

金针菇基因组测序及萜类合成关键基因分析

DOI: 10.13346/j.mycosystema.150044, PP. 670-682

Keywords: 金针菇,基因组,萜类

Full-Text   Cite this paper   Add to My Lib

Abstract:

金针菇是我国一种重要的食药用真菌,具有较高的营养和药用价值,尤其是从金针菇中分离得到了多种麦角甾醇、倍半萜等萜类,具有抗菌、抗肿瘤和降血脂等功效。以往关于金针菇的研究多集中在营养成分、栽培和市场开发等方面,而很少报道有关生物活性成分的合成和代谢研究。从福建省金针菇主要栽培品种中获得原生质体单核化L11菌株,我们进行了金针菇基因组测序与初步分析,并利用生物信息学手段,研究了其主要的生物活性成分——萜类合成途径中的关键基因。结果显示,金针菇单孢全基因组序列长度为34.75Mb。通过分析萜类合成途径中的相关基因,确定了4个萜类合成关键基因的基因结构,并且表明其蛋白结构具有稳定性,该类基因还含有多个信号肽和跨膜结构。金针菇基因组测序的完成,为下一步功能基因的筛选、分析等研究工作奠定了基础。

References

[1]  Bendtsen JD, Nielsen H, Heijne G, Brunak S, 2004. Improved prediction of signal peptides: SignalP 3. 0. Journal of Molecular Biology, 340(4): 783-795 [本文引用:1]
[2]  Cserzo M, Wallin E, Simon I, Heijne G, Elofsson A, 1997. Prediction of transmembrane alpha-helices in procariotic membrane proteins: the dense alignment surface method. Protein Engineering, 10(6): 673-676 [本文引用:1]
[3]  Dai YC, Cao Y, Zhou LW, Wu SH, 2013. Notes on the nomenclature of the most widely cultivated Ganoderma species in China. Mycosystema, 32: 947-952 (in Chinese) [本文引用:1]
[4]  Dai YC, Yang ZL, 2008. A revised checklist of medicinal fungi in China. Mycosystema, 27: 801-824 (in Chinese) [本文引用:1]
[5]  Dai YC, Zhou LW, Yang ZL, Wen HA, Bau T, Li TH, 2010. A revised checklist of edible fungi in China. Mycosystema, 29: 1-21 (in Chinese) [本文引用:1]
[6]  Fang YM, Zhang CS, Tan P, Wang YH, 2012. The anti-oxidation of the Flammulina velutipes flavonoids. Food Research and Development, 33(3): 15-18 (in Chinese) [本文引用:1]
[7]  Gasteiger E, Hoogland C, Gattiker A, Duvaud S, Wilkins MR, Appel RD, Bairoch A, 2005. Protein identification and analysis tools on the ExPASy Server. The Proteomics Protocols Hand book. Humana Press, Totowa. 571-607 [本文引用:1]
[8]  Geourjon C, Deleage G, 1994. SOPM: a self-optimized method for protein secondary structure prediction. Protein Engineering, 7(2): 157-164 [本文引用:1]
[9]  Hirai Y, Miehimasa I, Tetsuya M, Toshiharu O, 1998. New monoterpentriols from the fruiting body of Flammulina velutipes. Bioseience, Biotechnology, and Biochemistry, 62(7): 1364-1368 [本文引用:1]
[10]  Ishikawa NK, Fukushi Y, Yamaji K, Tahara S, Takahashi K, 2001. Antimicrobial cuparene-type sesquiterpenes, enokipodins C and D, from a mycelial culture of Flammulina velutipes. Journal of Natural Products, 64(7): 932-934 [本文引用:1]
[11]  Ishikawa NK, Yamaji K, Tahara S, Fukushi Y, Takahashi K, 2000. Highly oxidized cuparene-type sesquiterpenes from a mycelial culture of Flammulina velutipes. Phytochemistry, 54(8): 777-782 [本文引用:1]
[12]  Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, Katayama T, Kawashima S, Okuda S, Tokimatsu T, Yamanishi Y, 2008. KEGG for linking genomes to life and the environment. Nucleic Acids Research, 36(S1): 480-484 [本文引用:1]
[13]  Kang J, 2006. Chemical constituents and biological activities of Flammulina velutipes, Excoecaria agallocha and Morus mongolica. PhD Dissertation, Peking Union Medical College, Beijing. 1-192 (in Chinese) [本文引用:1]
[14]  Liu F, 2014. Preliminary study of Flammulina velutipes genome and transcriptome. PhD Dissertation, Fujian Agriculture and Forestry University, Fuzhou. 1-117 (in Chinese) [本文引用:1]
[15]  Luo RB, Liu BH, Xie YL, Li ZY, Huang WH, Yuan JY, He GZ, Chen YX, Pan Q, Liu YJ, Tang JB, Wu GX, Zhang H, Shi YJ, Liu Y, Yu C, Wang B, Lu Y, Han CL, Cheung DW, Yiu SM, Peng SL, Zhu XQ, Liu GM, Liao XK, Li YR, Yang HM, Wang J, Lam TW, Wang J, 2012. SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaScience, 1: 18 [本文引用:1]
[16]  Ma L, Ding P, Yang GX, He GY, 2006. Advances on the plant terpenoid isoprenoid biosynthetic pathway and its key enzymes. Biotechnology Bulletin, S1: 22-30 (in Chinese) [本文引用:1]
[17]  Stanke M, Steinkamp R, Waack S, Morgenstern B, 2004. AUGUSTUS: a web server for gene finding in eukaryotes. Nucleic Acids Research, 32(S2): W309-W312 [本文引用:1]
[18]  Wang QJ, Wang JW, 2012. The research of antibacterial plant steroid and its biosynthesis. Anti-Infection Pharmacy, 9(2): 86-91 (in Chinese) [本文引用:1]
[19]  刘芳, 2014. 金针菇基因组和转录组测序与初步研究. 福建农林大学博士论文, 福州. 1-117 [本文引用:2]
[20]  马靓, 丁鹏, 杨广笑, 何光源, 2006. 植物类萜生物合成途径及关键酶的研究进展. 生物技术通报, S1: 22-30 [本文引用:2]
[21]  王秋军, 王剑文, 2012. 抗菌植物甾体及其生物合成的研究进展. 抗感染药学, 9(2): 86-91 [本文引用:1]
[22]  王威, 2013. 基于基因组和转录组分析金针菇的交配型. 福建农林大学硕士论文, 福州. 1-76 [本文引用:1]
[23]  王雅琪, 杨晓丽, 宝丽, 高昊, 姚新生, 刘宏伟, 2012. 金针菇固体发酵菌丝体次级代谢产物分离鉴定. 菌物学报, 31(1): 127-132 [本文引用:1]
[24]  吴希哲, 高向东, 2002. 金针菇提取物的保肝及抗肿瘤作用. 中国生化药物杂志, 23(4): 176-178 [本文引用:1]
[25]  伍明, 郑林用, 许晓燕, 江南, 魏巍, 杨志荣, 罗霞, 2011. 金针菇活性物质及其作用研究进展. 中国食用菌, 2011(3): 6-8 [本文引用:1]
[26]  易承学, 2012. 金针菇抗肿瘤活性成分筛选及其纳米制剂研究. 江苏大学博士论文, 镇江. 1-152 [本文引用:1]
[27]  张长波, 孙红霞, 巩中军, 祝增荣, 2007. 植物萜类化合物的天然合成途径及其相关合酶. 植物生理学通讯, 43(4): 779-786 [本文引用:3]
[28]  周晓星, 苏宜香, 2007. 植物甾醇降胆固醇作用的研究现状. 国外医学(卫生学分册), 34(2): 101-105 [本文引用:1]
[29]  Wang W, 2013. The analysis of Flammulina velutipes mating-type based on genome and transcriptome data. Master Thesis, Fujian Agriculture and Forestry University, Fuzhou. 1-76 (in Chinese) [本文引用:1]
[30]  Wang YQ, Bao L, Yang XL, Li L, Li SF, Gao H, Yao XS, Wen H, Liu HW, 2012. Bioactive sesquiterpenoids from the solid culture of the edible mushroom Flammulina velutipes growing on cooked rice. Food Chemistry, 132(3): 1346-1353 [本文引用:1]
[31]  Wang YQ, Yang XL, Bao M, Gao H, Yao XS, Liu HW, 2012. Isolation and identification of secondary metabolites from the solid culture of Flammulina velutipes. Mycosystema, 31(1): 127-132 (in Chinese) [本文引用:1]
[32]  Wu M, Zheng LY, Xu XY, Jiang N, Wei W, Yang ZR, Luo X, 2011. Active substances and pharmacological activity of Flammulina velutipes. Edible Fungi of China, 2011(3): 6-8 (in Chinese) [本文引用:1]
[33]  Wu XZ, Gao XD, 2002. The liver-protective and anti-tumor effects of extract from Flammulina velutipes in mice. Chinese Journal of Biochemical Pharmaceutics, 23(4): 176-178 (in Chinese) [本文引用:1]
[34]  Yi CX, 2012. The anticancer active constituents from Flammulina velutipes and its nano-pharmaceutics research. PhD Dissertation, Jiangsu University, Zhenjiang. 1-152 (in Chinese) [本文引用:1]
[35]  Zhang CB, Sun HX, Gong ZJ, Zhu ZR, 2007. Plant terpenoid natural metabolism pathways and their synthases. Plant Physiology Communications, 43(4): 779-786 (in Chinese) [本文引用:1]
[36]  Zhou XX, Su YX, 2007. The research of lowering cholesterol effect of phytosterols. Foreign Medical Sciences (Section Hygiene), 34(2): 101-105 (in Chinese) [本文引用:1]
[37]  戴玉成, 曹云, 周丽伟, 吴声华, 2013. 中国灵芝学名之管见. 菌物学报, 32: 947-952 [本文引用:1]
[38]  戴玉成, 杨祝良, 2008. 中国药用真菌名录及部分名称的修订. 菌物学报, 27: 801-824 [本文引用:1]
[39]  戴玉成, 周丽伟, 杨祝良, 文华安, 图力古尔, 李泰辉, 2010. 中国食用菌名录. 菌物学报, 29: 1-21 [本文引用:1]
[40]  方玉梅, 张春生, 谭萍, 王毅红, 2012. 金针菇黄酮类化合物的抗氧化性作用. 食品研究与开发, 33(3): 15-18 [本文引用:1]
[41]  康洁, 2006. 构菌, 海漆和蒙桑化学成分及生物活性研究. 中国协和医科大学博士论文, 北京. 1-192 [本文引用:1]

Full-Text

Contact Us

service@oalib.com

QQ:3279437679

WhatsApp +8615387084133