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A Redox Regulatory System Critical for Mycobacterial Survival in Macrophages and Biofilm Development

DOI: 10.1371/journal.ppat.1004839

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Abstract:

Survival of M. tuberculosis in host macrophages requires the eukaryotic-type protein kinase G, PknG, but the underlying mechanism has remained unknown. Here, we show that PknG is an integral component of a novel redox homeostatic system, RHOCS, which includes the ribosomal protein L13 and RenU, a Nudix hydrolase encoded by a gene adjacent to pknG. Studies in M. smegmatis showed that PknG expression is uniquely induced by NADH, which plays a key role in metabolism and redox homeostasis. In vitro, RenU hydrolyses FAD, ADP-ribose and NADH, but not NAD+. Absence of RHOCS activities in vivo causes NADH and FAD accumulation, and increased susceptibility to oxidative stress. We show that PknG phosphorylates L13 and promotes its cytoplasmic association with RenU, and the phosphorylated L13 accelerates the RenU-catalyzed NADH hydrolysis. Importantly, interruption of RHOCS leads to impaired mycobacterial biofilms and reduced survival of M. tuberculosis in macrophages. Thus, RHOCS represents a checkpoint in the developmental program required for mycobacterial growth in these environments.

References

[1]  Armstrong JA, Hart DPA (1971) Response of cultured macrophages to Mycobacterium tuberculosis, with observations on fusion of lysosomes with phagosomes. J Exp Med 134: 713–740. pmid:15776571 doi: 10.1084/jem.134.3.713
[2]  Russell DG (2001) Mycobacterium tuberculosis: here today, and here tomorrow. Nat Rev Mol Cell Biol 2: 569–577. pmid:11483990 doi: 10.1038/35085034
[3]  Walburger A, Koul A, Ferrari G, Nguyen L, Prescianotto-Baschong C, et al. (2004) Protein kinase G from pathogenic mycobacteria promotes survival within macrophages. Science 304: 1800–1804. pmid:15155913 doi: 10.1126/science.1099384
[4]  Wolff KA, Nguyen HT, Cartabuke RH, Singh A, Ogwang S, et al. (2009) Protein kinase G is required for intrinsic antibiotic resistance in mycobacteria. Antimicrob Agents Chemother 53: 3515–3519. doi: 10.1128/AAC.00012-09. pmid:19528288
[5]  van der Woude AD, Stoop EJ, Stiess M, Wang S, Ummels R, et al. (2014) Analysis of SecA2-dependent substrates in Mycobacterium marinum identifies protein kinase G (PknG) as a virulence effector. Cell Microbiol 16: 280–295. doi: 10.1111/cmi.12221. pmid:24119166
[6]  Costerton JW, Stewart PS, Greenberg EP (1999) Bacterial biofilms: a common cause of persistent infections. Science 284: 1318–1322. pmid:10334980 doi: 10.1126/science.284.5418.1318
[7]  Gefen O, Balaban NQ (2009) The importance of being persistent: heterogeneity of bacterial populations under antibiotic stress. FEMS Microbiol Rev 33: 704–717. doi: 10.1111/j.1574-6976.2008.00156.x. pmid:19207742
[8]  Kolter R, Losick R (1998) One for all and all for one. Science 280: 226–227. pmid:9565532 doi: 10.1126/science.280.5361.226
[9]  Lewis K (2007) Persister cells, dormancy and infectious disease. Nat Rev Microbiol 5: 48–56. pmid:17143318 doi: 10.1038/nrmicro1557
[10]  Ojha A, Anand M, Bhatt A, Kremer L, Jacobs WR Jr., et al. (2005) GroEL1: a dedicated chaperone involved in mycolic acid biosynthesis during biofilm formation in mycobacteria. Cell 123: 861–873. pmid:16325580 doi: 10.1016/j.cell.2005.09.012
[11]  Ojha AK, Baughn AD, Sambandan D, Hsu T, Trivelli X, et al. (2008) Growth of Mycobacterium tuberculosis biofilms containing free mycolic acids and harbouring drug-tolerant bacteria. Mol Microbiol 69: 164–174. doi: 10.1111/j.1365-2958.2008.06274.x. pmid:18466296
[12]  Ojha A, Hatfull GF (2007) The role of iron in Mycobacterium smegmatis biofilm formation: the exochelin siderophore is essential in limiting iron conditions for biofilm formation but not for planktonic growth. Mol Microbiol 66: 468–483. pmid:17854402 doi: 10.1111/j.1365-2958.2007.05935.x
[13]  Nguyen L, Walburger A, Houben E, Koul A, Muller S, et al. (2005) Role of protein kinase G in growth and glutamine metabolism of Mycobacterium bovis BCG. J Bacteriol 187: 5852–5856. pmid:16077135 doi: 10.1128/jb.187.16.5852-5856.2005
[14]  Cowley S, Ko M, Pick N, Chow R, Downing KJ, et al. (2004) The Mycobacterium tuberculosis protein serine/threonine kinase PknG is linked to cellular glutamate/glutamine levels and is important for growth in vivo. Mol Microbiol 52: 1691–1702. pmid:15186418 doi: 10.1111/j.1365-2958.2004.04085.x
[15]  Scherr N, Honnappa S, Kunz G, Mueller P, Jayachandran R, et al. (2007) Structural basis for the specific inhibition of protein kinase G, a virulence factor of Mycobacterium tuberculosis. Proc Natl Acad Sci U S A 104: 12151–12156. pmid:17616581 doi: 10.1073/pnas.0702842104
[16]  Bessman MJ, Frick DN, O'Handley SF (1996) The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes. J Biol Chem 271: 25059–25062. pmid:8810257 doi: 10.1074/jbc.271.41.25059
[17]  Dos Vultos T, Blazquez J, Rauzier J, Matic I, Gicquel B (2006) Identification of Nudix hydrolase family members with an antimutator role in Mycobacterium tuberculosis and Mycobacterium smegmatis. J Bacteriol 188: 3159–3161. pmid:16585780 doi: 10.1128/jb.188.8.3159-3161.2006
[18]  Kloosterman H, Vrijbloed JW, Dijkhuizen L (2002) Molecular, biochemical, and functional characterization of a Nudix hydrolase protein that stimulates the activity of a nicotinoprotein alcohol dehydrogenase. J Biol Chem 277: 34785–34792. pmid:12089158 doi: 10.1074/jbc.m205617200
[19]  Sassetti CM, Boyd DH, Rubin EJ (2003) Genes required for mycobacterial growth defined by high density mutagenesis. Mol Microbiol 48: 77–84. pmid:12657046 doi: 10.1046/j.1365-2958.2003.03425.x
[20]  Houben EN, Walburger A, Ferrari G, Nguyen L, Thompson CJ, et al. (2009) Differential expression of a virulence factor in pathogenic and non-pathogenic mycobacteria. Mol Microbiol 72: 41–52. doi: 10.1111/j.1365-2958.2009.06612.x. pmid:19210624
[21]  Brekasis D, Paget MS (2003) A novel sensor of NADH/NAD+ redox poise in Streptomyces coelicolor A3(2). The EMBO journal 22: 4856–4865. pmid:12970197 doi: 10.1093/emboj/cdg453
[22]  Gyan S, Shiohira Y, Sato I, Takeuchi M, Sato T (2006) Regulatory loop between redox sensing of the NADH/NAD(+) ratio by Rex (YdiH) and oxidation of NADH by NADH dehydrogenase Ndh in Bacillus subtilis. Journal of bacteriology 188: 7062–7071. pmid:17015645 doi: 10.1128/jb.00601-06
[23]  Bitoun JP, Liao S, Yao X, Xie GG, Wen ZT (2012) The Redox-Sensing Regulator Rex Modulates Central Carbon Metabolism, Stress Tolerance Response and Biofilm Formation by Streptococcus mutans. PloS one 7: e44766. doi: 10.1371/journal.pone.0044766. pmid:23028612
[24]  Bitoun JP, Nguyen AH, Fan Y, Burne RA, Wen ZT (2011) Transcriptional repressor Rex is involved in regulation of oxidative stress response and biofilm formation by Streptococcus mutans. FEMS microbiology letters 320: 110–117. doi: 10.1111/j.1574-6968.2011.02293.x. pmid:21521360
[25]  Hull RV, Conger PS 3rd, Hoobler RJ (2001) Conformation of NADH studied by fluorescence excitation transfer spectroscopy. Biophysical chemistry 90: 9–16. pmid:11321678 doi: 10.1016/s0301-4622(00)00239-8
[26]  Mazumder B, Sampath P, Seshadri V, Maitra RK, DiCorleto PE, et al. (2003) Regulated release of L13a from the 60S ribosomal subunit as a mechanism of transcript-specific translational control. Cell 115: 187–198. pmid:14567916 doi: 10.1016/s0092-8674(03)00773-6
[27]  Stuhrmann HB, Koch MH, Parfait R, Haas J, Ibel K, et al. (1977) Shape of the 50S subunit of Escherichia coli ribosomes. Proc Natl Acad Sci U S A 74: 2316–2320. pmid:329279 doi: 10.1073/pnas.74.6.2316
[28]  Chaudhuri S, Vyas K, Kapasi P, Komar AA, Dinman JD, et al. (2007) Human ribosomal protein L13a is dispensable for canonical ribosome function but indispensable for efficient rRNA methylation. RNA 13: 2224–2237. pmid:17921318 doi: 10.1261/rna.694007
[29]  Torres M, Condon C, Balada JM, Squires C, Squires CL (2001) Ribosomal protein S4 is a transcription factor with properties remarkably similar to NusA, a protein involved in both non-ribosomal and ribosomal RNA antitermination. The EMBO journal 20: 3811–3820. pmid:11447122 doi: 10.1093/emboj/20.14.3811
[30]  Scott JM, Ju J, Mitchell T, Haldenwang WG (2000) The Bacillus subtilis GTP binding protein obg and regulators of the sigma(B) stress response transcription factor cofractionate with ribosomes. J Bacteriol 182: 2771–2777. pmid:10781545 doi: 10.1128/jb.182.10.2771-2777.2000
[31]  Mukhopadhyay R, Ray PS, Arif A, Brady AK, Kinter M, et al. (2008) DAPK-ZIPK-L13a axis constitutes a negative-feedback module regulating inflammatory gene expression. Molecular cell 32: 371–382. doi: 10.1016/j.molcel.2008.09.019. pmid:18995835
[32]  Ray PS, Arif A, Fox PL (2007) Macromolecular complexes as depots for releasable regulatory proteins. Trends in biochemical sciences 32: 158–164. pmid:17321138 doi: 10.1016/j.tibs.2007.02.003
[33]  Warner JR, McIntosh KB (2009) How common are extraribosomal functions of ribosomal proteins? Molecular cell 34: 3–11. doi: 10.1016/j.molcel.2009.03.006. pmid:19362532
[34]  Niebisch A, Kabus A, Schultz C, Weil B, Bott M (2006) Corynebacterial protein kinase G controls 2-oxoglutarate dehydrogenase activity via the phosphorylation status of the OdhI protein. J Biol Chem 281: 12300–12307. pmid:16522631 doi: 10.1074/jbc.m512515200
[35]  O'Hare HM, Duran R, Cervenansky C, Bellinzoni M, Wehenkel AM, et al. (2008) Regulation of glutamate metabolism by protein kinases in mycobacteria. Mol Microbiol 70: 1408–1423. doi: 10.1111/j.1365-2958.2008.06489.x. pmid:19019160
[36]  Tretter L, Adam-Vizi V (2005) Alpha-ketoglutarate dehydrogenase: a target and generator of oxidative stress. Philosophical transactions of the Royal Society of London Series B, Biological sciences 360: 2335–2345. pmid:16321804 doi: 10.1098/rstb.2005.1764
[37]  Kohanski MA, Dwyer DJ, Hayete B, Lawrence CA, Collins JJ (2007) A common mechanism of cellular death induced by bactericidal antibiotics. Cell 130: 797–810. pmid:17803904 doi: 10.1016/j.cell.2007.06.049
[38]  Smith T, Wolff KA, Nguyen L (2013) Molecular biology of drug resistance in Mycobacterium tuberculosis. Curr Top Microbiol Immunol 374: 53–80. doi: 10.1007/82_2012_279. pmid:23179675
[39]  Kolodkin-Gal I, Elsholz AK, Muth C, Girguis PR, Kolter R, et al. (2013) Respiration control of multicellularity in Bacillus subtilis by a complex of the cytochrome chain with a membrane-embedded histidine kinase. Genes Dev 27: 887–899. doi: 10.1101/gad.215244.113. pmid:23599347
[40]  Dietrich LE, Teal TK, Price-Whelan A, Newman DK (2008) Redox-active antibiotics control gene expression and community behavior in divergent bacteria. Science 321: 1203–1206. doi: 10.1126/science.1160619. pmid:18755976
[41]  Depas WH, Hufnagel DA, Lee JS, Blanco LP, Bernstein HC, et al. (2013) Iron induces bimodal population development by Escherichia coli. Proc Natl Acad Sci U S A 110: 2629–2634. doi: 10.1073/pnas.1218703110. pmid:23359678
[42]  Singh R, Mailloux RJ, Puiseux-Dao S, Appanna VD (2007) Oxidative stress evokes a metabolic adaptation that favors increased NADPH synthesis and decreased NADH production in Pseudomonas fluorescens. J Bacteriol 189: 6665–6675. pmid:17573472 doi: 10.1128/jb.00555-07
[43]  Geier H, Mostowy S, Cangelosi GA, Behr MA, Ford TE (2008) Autoinducer-2 triggers the oxidative stress response in Mycobacterium avium, leading to biofilm formation. Appl Environ Microbiol 74: 1798–1804. doi: 10.1128/AEM.02066-07. pmid:18245256
[44]  Demple B (2008) Community organizers and (bio)filmmaking. Nature chemical biology 4: 653–654. doi: 10.1038/nchembio1108-653. pmid:18936747

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