[1] | Abu Al-Soud W, Jnsson LJ, Rdstrm P. 2000. Identification and characterization of immunoglobulin G in blood as a major inhibitor of diagnostic PCR. Journal of Clinical Microbiology 38:345-350
|
[2] | Achituv Y, Pedrotti ML. 1999. Costs and gains of porcelain crab suspension feeding in different flow conditions. Marine Ecology Progress Series 184:161-169
|
[3] | Ahmed M, Mustaquim J. 1974. Population structure of four species of porcellanid crabs (Decapoda: Anomura) occurring on the coast of Karachi. Marine Biology 26:173-182
|
[4] | Akane A, Matsubara K, Nakamura H, Takahashi S, Kimura K. 1994. Identification of the heme compound copurified with deoxyribonucleic acid (DNA) from bloodstains, a major inhibitor of polymerase chain reaction (PCR) amplification. Journal of Forensic Sciences 39:362-372
|
[5] | Alaeddini R. 2012. Forensic implications of PCR inhibition—a review. Forensic Science International: Genetics 6:297-305
|
[6] | Andrade LL, Leite DCA, Ferreira EM, Ferreira LQ, Paula GR, Maguire MJ, Hubert CRJ, Peixoto RS, Domingues RMCP, Rosado AS. 2012. Microbial diversity and anaerobic hydrocarbon degradation potential in an oil-contaminated mangrove sediment. BMC Microbiology 12:186
|
[7] | Bandaranayake WM. 2006. The nature and role of pigments of marine invertebrates. Natural Product Reports 23:223-255
|
[8] | Batmalle CS, Chiang HI, Zhang K, Lomas MW, Martiny AC. 2014. Development and bias assessment of a method for targeted metagenomic sequencing of marine cyanobacteria. Applied and Environmental Microbiology 80:1116-1125
|
[9] | Belec L, Authier J, Eliezer-Vanerot MC, Piedouillet C, Mohamed AS, Gherardi RK. 1998. Myoglobin as a polymerase chain reaction (PCR) inhibitor: a limitation for PCR from skeletal muscle tissue avoided by the use of Thermus thermophilus polymerase. Muscle Nerve 21:1064-1067
|
[10] | Bernal-Martínez L, Buitrago MJ, Castelli MV, Rodriguez-Tudela JL, Cuenca-Estrella M. 2013. Development of a single tube multiplex real-time PCR to detect the most clinically relevant Mucormycetes species. Clinical Microbiology and Infection 19:E1-E7
|
[11] | Boman HG, Agerberth B, Boman A. 1993. Mechanisms of action on Escherichia coli of cecropin P1 and PR-39, two antibacterial peptides from pig intestine. Infection and Immunity 61:2978-2984
|
[12] | Boncristiani H, Li J, Evans JD, Pettis J, Chen Y. 2011. Scientific note on PCR inhibitors in the compound eyes of honey bees, Apis mellifera. Apidologie 42:457-460
|
[13] | Brandenburg LO, Merres J, Albrecht LJ, Varoga D, Pufe T. 2012. Antimicrobial peptides: multifunctional drugs for different applications. Polymers 4:539-560
|
[14] | Brogden KA. 2005. Antimicrobial peptides: pore formers or metabolic inhibitors in bacteria? Nature Reviews Microbiology 3:238-250
|
[15] | Brogden KA, Ackermann M, McCray PB, Tack BF. 2003. Antimicrobial peptides in animals and their role in host defences. International Journal of Antimicrobial Agents 22:465-478
|
[16] | Brunet M, Arnaud J, Mazza J. 1994. Gut structure and digestive cellular processes in marine Crustacea. Oceanography and Marine Biology: An Annual Review 32:335-367
|
[17] | Drrie J, Wellner V, Kmpgen E, Schuler G, Schaft N. 2006. An improved method for RNA isolation and removal of melanin contamination from melanoma tissue: implications for tumor antigen detection and amplification. Journal of Immunological Methods 313:119-128
|
[18] | Dubey S, Roulin A. 2014. Evolutionary and biomedical consequences of internal melanins. Pigment Cell and Melanoma Research 27:327-338
|
[19] | Eckhart L, Bach J, Ban J, Tschachler E. 2000. Melanin binds reversibly to thermostable DNA polymerase and inhibits its activity. Biochemical and Biophysical Research Communications 271(3):726-730
|
[20] | Fierer N, Breitbart M, Nulton J, Salamon P, Lozupone C, Jones R, Robeson M, Edwards RA, Felts B, Rayhawk S, Knight R, Rohwer F, Jackson RB. 2007. Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil. Applied and Environmental Microbiology 73:7059-7066
|
[21] | Gane EJ, Stedman CA, Hyland RH, Ding X, Svarovskaia E, Symonds WT, Hindes RG, Berrey MM. 2013. Nucleotide polymerase inhibitor sofosbuvir plus ribavirin for hepatitis C. New England Journal of Medicine 368:34-44
|
[22] | Geng J, Yuan P, Shao C, Yu SB, Zhou B, Zhou P, Chen XD. 2010. Bacterial melanin interacts with double-stranded DNA with high affinity and may inhibit cell metabolism in vivo. Archives of Microbiology 192(5):321-329
|
[23] | Gorr SU. 2009. Antimicrobial peptides of the oral cavity. Periodontology 2000 51:152-180
|
[24] | Haig J. 1983. Porcellanidae (Decapoda, Anomura) from the Seychelles, Western Indian Ocean. Crustaceana 45:279-289
|
[25] | Hartman LJ, Coyne SR, Norwood DA. 2005. Development of a novel internal positive control for Taqman based assays. Molecular and Cellular Probes 19:51-59
|
[26] | Javle M, Curtin NJ. 2011. The potential for poly (ADP-ribose) polymerase inhibitors in cancer therapy. Therapeutic Advances in Medical Oncology 3:257-326
|
[27] | Jensen PC, Purcell MK, Morado JF, Eckert GL. 2012. Development of a real-time PCR assay for detection of planktonic red king crab (Paralithodes camtschaticus (Tilesius 1815)) larvae. Journal of Shellfish Research 31:917-924
|
[28] | Jin S, Lin XM, Law H, Kwek KY, Yeo GS, Ding C. 2012. Further improvement in quantifying male fetal DNA in maternal plasma. Clinical Chemistry 58:465-468
|
[29] | Kim W, Abele LG. 1990. Molecular phylogeny of selected decapod crustaceans based on 18s rRNA nucleotide sequences. Journal of Crustacean Biology 10:1-13
|
[30] | Liu-Young G, Kozal MJ. 2008. Review: Hepatitis C protease and polymerase inhibitors in development. AIDS Patient Care and STDs 22:449-457
|
[31] | Mtt J, Saarela M, Alaluusua S, Oja V, Jousimies-Somer H, Asikainen S. 1998. Detection of Porphyromonas gingivalis from saliva by PCR by using a simple sample-processing method. Journal of Clinical Microbiology 36:157-160
|
[32] | Maurer JJ. 2011. Rapid detection and limitations of molecular techniques. Annual Review of Food Science and Technology 2:259-279
|
[33] | McBeath AJ, Penston MJ, Snow M, Cook PF, Bricknell IR, Cunningham CO. 2006. Development and application of real-time PCR for specific detection of Lepeophtheirus salmonis and Caligus elongatus larvae in Scottish plankton samples. Diseases of Aquatic Organisms 73:141-150
|
[34] | McCartney AL. 2002. Application of molecular biological methods for studying probiotics and the gut flora. The British Journal of Nutrition 88(Suppl 1):S29-S37
|
[35] | McGaw IJ, Curtis DL. 2013. A review of gastric processing in decapod crustaceans. Journal of Comparative Physiology B, Biochemical, Systems, and Environmental Physiology 183:443-465
|
[36] | Moorad JA, Mayer MS, Simovich MA. 1997. Extraction of DNA from anostracan cysts (Crustacea, Branchiopoda) for use in RAPD-PCR analyses. Hydrobiologia 359:159-162
|
[37] | Morrison CL, Harvey AW, Lavery S, Tieu K, Huang Y, Cunningham CW. 2002. Mitochondrial gene rearrangements confirm the parallel evolution of the crab-like form. Proceedings of the Royal Society of London. Series B: Biological Sciences 269:345-350
|
[38] | Ochert AS, Boulter AW, Birnbaum W, Johnson NW, Teo CG. 1994. Inhibitory effect of salivary fluids on PCR: potency and removal. Genome Research 3:365-368
|
[39] | Okeke MI, Okoli AS, Nilssen , Moens U, Tryland M, Bhn T, Traavik T. 2014. Molecular characterization and phylogenetics of Fennoscandian cowpox virus isolates based on the p4c and atip genes. Virology Journal 11:119
|
[40] | Opel KL, Chung D, McCord BR. 2009. A study of PCR inhibition mechanisms using real time PCR. Journal of Forensic Sciences 55:25-33
|
[41] | Otero-González AJ, Magalhes BS, Garcia-Villarino M, López-Abarrategui C, Sousa DA, Dias SC, Franco OL. 2010. Antimicrobial peptides from marine invertebrates as a new frontier for microbial infection control. The FASEB Journal 24:1320-1334
|
[42] | Pan M, McBeath AJ, SJ Hay, Cunningham Pierce. 2008. Real-time PCR assay for detection and relative quantification of Liocarcinus depurator larvae from plankton samples. Marine Biology 153:859-870
|
[43] | Paul R, Sankolli KN, Shenoy S. 1993. Juvenile morphology and appearance of sexual appendages in two porcellanid crabs, Petrolisthes rufescens (Heller, 1861) and Pisidia gordoni (Johnson, 1970) (Decapoda, Anomura, Porcellanidae) Crustaceana 65:346-357
|
[44] | Rdstrm P, Knutsson R, Wolffs P, Lvenklev M, Lfstrm C. 2004. Pre-PCR processing: strategies to generate PCR-compatible samples. Molecular Biotechnology 26(2):133-146
|
[45] | Riisgrd HU, Larsen PS. 2010. Particle-capture mechanisms in suspension-feeding invertebrates. Marine Ecology Progress Series 418:255-293
|
[46] | Sánchez-Rodríguez A, Portal O, Rojas LE, Ocaa B, Mendoza M, Acosta M, Jiménez E, Hfte M. 2008. An efficient method for the extraction of high-quality fungal total RNA to study the Mycosphaerella fijiensis–Musa spp. interaction. Molecular Biotechnology 40:299-305
|
[47] | Schneider S, Enkerli J, Widmer F. 2009. A generally applicable assay for the quantification of inhibitory effects on PCR. Journal of Microbiological Methods 78:351-353
|
[48] | Schrader C, Schielke A, Ellerbroek L, Johne R. 2012. PCR inhibitors–occurrence, properties and removal. Journal of Applied Microbiology 113:1014-1026
|
[49] | Siddiqui FA, Kazmi QB. 2003. A checklist of marine anomurans (Crustacea: Decapoda) of Pakistan, northern Arabian Sea. Memoirs of Museum Victoria 60:87-89
|
[50] | Small HJ, Pagenkopp KM. 2011. Reservoirs and alternate hosts for pathogens of commercially important crustaceans: a review. Journal of Invertebrate Pathology 106:153-164
|
[51] | Sderhll K. 1982. Prophenoloxidase activating system and melanization—a recognition mechanism of arthropods? A Review. Developmental and Comparative Immunology 6:601-611
|
[52] | Sritunyalucksana K, Sderhll K. 2000. The proPO and clotting system in crustaceans. Aquaculture 191:53-69
|
[53] | Tincu JA, Taylor SW. 2004. Antimicrobial peptides from marine invertebrates. Antimicrobial Agents and Chemotherapy 48:3645-3654
|
[54] | Vadopalas B, Bouma JV, Jackels CR, Friedman CS. 2006. Application of real-time PCR for simultaneous identification and quantification of larval abalone. Journal of Experimental Marine Biology and Ecology 334:219-228
|
[55] | Valdivia N, Stotz W. 2006. Feeding behavior of the porcellanid crab Allopetrolisthes spinifrons, symbiont of the sea anemone Phymactis papillosa. Journal of Crustacean Biology 26:308-315
|
[56] | Vázquez L, Alpuche J, Maldonado G, Agundis C, Pereyra-Morales A, Zenteno E. 2009. Review: immunity mechanisms in crustaceans. Innate Immunity 15:179-188
|
[57] | Wang SY, Hong C, Lotz JM. 1996. Development of a PCR procedure for the detection of Baculovirus penaei in shrimp. Diseases of Aquatic Organisms 25:123-131
|
[58] | Watling L. 2013. Feeding and digestive system. In: Watling L, Thiel M, eds. The natural history of Crustacea, Functional morphology and diversity. New York: Oxford University Press. vol. 1:237-260
|
[59] | Werding B., Hiller A. 2007. The Porcellanidae (Crustacea: Decapoda: Anomura) of the Red Sea with description of a new species of Petrolisthes. Zootaxa 1460:1-24
|
[60] | Wiedbrauk DL, Werner JC, Drevon A M. 1995. Inhibition of PCR by aqueous and vitreous fluids. Journal of Clinical Microbiology 33:2643-2646
|
[61] | Wilson IG. 1997. Inhibition and facilitation of nucleic acid amplification. Applied and Environmental Microbiology 63:3741-3751
|
[62] | Yaqoob M. 1974. Larval development of Petrolisthes rufescens (Heller, 1861) (Decapoda, Porcellanidae) under laboratory conditions. Pakistan Journal of Zoology 6:47-61
|
[63] | Yoshii T, Tamura K, Taniguchi T, Akiyama K, Ishiyama I. 1993. Water-soluble eumelanin as a PCR-inhibitor and a simple method for its removal. Nippon Hoigaku Zasshi 47:323-329
|
[64] | Zasloff M. 2002. Antimicrobial peptides of multicellular organisms. Nature 415:389-395
|