Surface plasmon resonance (SPR) is a well-established optical biosensor technology with many proven applications in the study of molecular interactions as well as in surface and material science. SPR is usually applied in the label-free mode which may be advantageous in cases where the presence of a label may potentially interfere with the studied interactions per se. However, the fundamental challenges of label-free SPR in terms of limited sensitivity and specificity are well known. Here we present a new concept called label-enhanced SPR, which is based on utilizing strongly absorbing dye molecules in combination with the evaluation of the full shape of the SPR curve, whereby the sensitivity as well as the specificity of SPR is significantly improved. The performance of the new label-enhanced SPR method was demonstrated by two simple model assays: a small molecule assay and a DNA hybridization assay. The small molecule assay was used to demonstrate the sensitivity enhancement of the method, and how competitive assays can be used for relative affinity determination. The DNA assay was used to demonstrate the selectivity of the assay, and the capabilities in eliminating noise from bulk liquid composition variations.
References
[1]
Cooper, M.A. Label-Free Biosensors: Techniques and Applications; Cambridge University Press: Cambridge, UK, 2009.
[2]
Cooper, M.A.; Mayr, L.M. Label Free Technologies for Drug Discovery; Wiley: Chichester, UK, 2011.
Liedberg, B.; Nylander, C.; Lundstr?m, I. Surface plasmon resonance for gas detection and biosensing. Sens. Actuators 1983, 4, 299–304.
[5]
Flanagan, M.; Pantell, R. Surface plasmon resonance and immunosensors. Elect. Lett. 1984, 20, 968–970.
[6]
Homola, J. Surface plasmon resonance sensors for detection of chemical and biological species. Chem. Rev. 2008, 108, 462–493.
[7]
Rich, R.L.; Myszka, D.G. Grading the commercial optical biosensor literature-class of 2008: ‘The mighty binders’. J. Mol. Recogn. 2010, 23, 1–64.
[8]
Holdgate, G.A.; Anderson, M.; Edfeldt, F.; Geschwindner, S. Affinity-based, biophysical methods to detect and analyze ligand binding to recombinant proteins: Matching high information content with high throughput. J. Struct. Biol. 2010, 172, 142–157.
[9]
Rich, R.L.; Myszka, D.G. Why you should be using more SPR biosensor technology. Drug Disc. Tod: Technol. 2004, 1, 301–308.
Piliarik, M.; Homola, J. Surface plasmon resonance (SPR) sensors: Approaching their limits? Opt. Express 2009, 17, 16505–16517.
[12]
Fan, X.; White, I.; Shopova, S.; Zhu, H.; Suter, J.; Sun, Y. Sensitive optical biosensors for unlabeled targets: A review. Anal. Chim. Acta 2008, 620, 8–26.
[13]
Ramachandran, N.; Larson, D.; Stark, P.; Hainsworth, E.; LaBaer, J. Emerging tools for real-time label-free detection of interactions on functional protein microarrays. FEBS J. 2005, 272, 5412–5425.
[14]
Sauer, M.; Hofkens, J.; Enderlein, J. Handbook of Fluorescence Spectroscopy and Imaging: From Ensemble to Single Molecules; Wiley: Weinheim, Germany, 2011.
[15]
Ekgasit, S.; Thammacharoen, C.; Yu, F.; Knoll, W. Evanescent field in surface plasmon resonance and surface plasmon field-enhanced fluorescence spectroscopies. Anal. Chem. 2004, 76, 2210–2219.
[16]
Albers, W.; Vikholm-Lundin, I. Surface Plasmon Resonance on Nanoscale Organic Films. In Nano-Bio-Sensing; Carrara, S., Ed.; Springer: New York, NY, USA, 2010.
[17]
Sadowski, J.W.; Korhonen, I.K.; Peltonen, J.P. Characterization of thin films and their structures in surface plasmon resonance measurements. Opt. Eng. 1995, 34, 2581–2586.
[18]
Homola, J. Present and future of surface plasmon resonance biosensors. Anal. Bioanal. Chem. 2003, 377, 528–539.
[19]
Homola, J. Electormagnetic Theory of Surface Plasmons. In Surface Plasmon Resonance Based Sensors; Homola, J., Ed.; Springer: Berlin, Germany, 2006.
[20]
Kolomenskii, A.A.; Gershon, P.D.; Schuessler, H.A. Surface-plasmon resonance spectrometry and characterization of absorbing liquids. Appl. Opt. 2000, 39, 3314–3320.
[21]
Komatsu, H.; Miyachi, M.; Fujii, E.; Citterio, D.; Yamada, K.; Sato, Y.; Kurihara, K.; Kawaguchi, H.; Suzuki, K. Spr sensor signal amplification based on dye-doped polymer particles. Sci. Tech. Adv. Mat. 2006, 7, 150–155.
[22]
Salamon, Z.; Macleod, H.A.; Tollin, G. Surface plasmon resonance spectroscopy as a tool for investigating the biochemical and biophysical properties of membrane protein systems. I: Theoretical principles. Biochim. Biophys. Acta 1997, 1331, 117–129.
[23]
Liedberg, B.; Lundstr?m, I.; Stenberg, E. Principles of biosensing with an extended coupling matrix and surface plasmon resonance. Sens. Actuators B 1993, 11, 63–72.
[24]
Esteban, ó.; González-Cano, A.; Díaz-Herrera, N.; Navarrete, M.-C. Absorption as a selective mechanism in surface plasmon resonance fiber optic sensors. Opt. Lett. 2006, 31, 3089–3091.
[25]
Hanning, A.; Roeraade, J.; Delrow, J.J.; Jorgenson, R.C. Enhanced sensitivity of wavelength modulated surface plasmon resonance devices using dispersion from a dye solution. Sens. Actuators B 1999, 54, 25–36.
[26]
Nakkach, M.; Lecaruyer, P.; Bardin, F.; Sakly, J.; Lakhdar, Z.B.; Canva, M. Absorption and related optical dispersion effects on the spectral response of a surface plasmon resonance sensor. Appl. Opt. 2008, 47, 6177–6182.
[27]
L?f?s, S.; Johnsson, B. A novel hydrogel matrix on gold surfaces in surface plasmon resonance sensors for fast and efficient covalent immobilization of ligands. J. Chem. Soc. Chem. Commun. 1990, 21, 1526–1528.
[28]
Rich, R.; Myszka, D. Advances in surface plasmon resonance biosensor analysis. Curr. Opin. Biotech. 2000, 11, 54–61.
[29]
Giannetti, A.M. From experimental design to validated hits: A comprehensive walk-through of fragment lead identification using surface plasmon resonance. Meth. Enzymol. 2011, 493, 169.
[30]
H?m?l?inen, M.; Zhukov, A.; Ivarsson, M.; Fex, T.; Gottfries, J.; Karlsson, R.; Bj?rsne, M. Label-free primary screening and affinity ranking of fragment libraries using parallel analysis of protein panels. J. Biomol. Screen. 2008, 13, 202–209.
[31]
Masel, R.I. Principles of Adsorption and Reaction on Solid Surfaces; Wiley: New York, NY, USA, 1996.
[32]
Karlsson, R. Real-time competitive kinetic analysis of interactions between low-molecular-weight ligands in solution and surface-immobilized receptors. Anal. Biochem. 1994, 221, 142–151.
[33]
Karlsson, R.; F?lt, A. Experimental design for kinetic analysis of protein-protein interactions with surface plasmon resonance biosensors. J. Immunol. Method. 1997, 200, 121–133.
[34]
Motulsky, H.J.; Mahan, L.C. The kinetics of competitive radioligand binding predicted by the law of mass action. Mol. Pharmacol. 1984, 25, 1–9.
[35]
Huber, W.; Mueller, F. Biomolecular interaction analysis in drug discovery using surface plasmon resonance technology. Curr. Pharm. Des. 2006, 12, 3999–4021.
[36]
Frostell-Karlsson, ?.; Remaeus, A.; Roos, H.; Andersson, K.; Borg, P.; H?m?l?inen, M.; Karlsson, R. Biosensor analysis of the interaction between immobilized human serum albumin and drug compounds for prediction of human serum albumin binding levels. J. Med. Chem. 2000, 43, 1986–1992.
[37]
Navratilova, I.; Myszka, D.G. Investigating Molecular Interactions and Binding. In Surface Plasmon Resonance Based Sensors; Homola, J., Ed.; Springer: Berlin, Germany, 2006.
[38]
Daniel, M.-C.; Astruc, D. Gold nanoparticles: Assembly, supramolecular chemistry, quantum-size-related properties, and applications toward biology, catalysis, and nanotechnology. Chem. Rev. 2004, 104, 293–346.
[39]
Kubitschko, S.; Spinke, J.; Brückner, T.; Pohl, S.; Oranth, N. Sensitivity enhancement of optical immunosensors with nanoparticles. Anal. Biochem. 1997, 253, 112–122.
[40]
Sato, Y.; Sato, Y.; Okumura, A.; Suzuki, K.; Kawaguchi, H. Flow-stress-induced discrimination of a k-ras point mutation by sandwiched polymer microsphere-enhanced surface plasmon resonance. J. Biomat. Sci. Pol. Edit. 2004, 15, 297–310.
Yu, F.; Persson, B.; L?f?s, S.; Knoll, W. Attomolar sensitivity in bioassays based on surface plasmon fluorescence spectroscopy. J. Am. Chem. Soc. 2004, 126, 8902–8903.