In this paper the importance of C–H?O intermolecular hydrogen bonds and van der Waals forces in crystal packing stabilization of 16α-hydroxyfriedelin (1) and 3-oxo-16-methylfriedel-16-ene (2) is described. Compound 1 is a natural product isolated from the hexane extract of Salacia elliptica branches, whereas compound 2 is obtained from compound 1 after dehydration accompanied by methyl migration of C-17 to C-16. The single-crystal X-ray diffraction experiments for 1 and 2 were carried out at 150?K, and the crystallographic study demonstrated that these compounds crystallize in noncentrosymmetric space groups, with 1 showing an orthorhombic P212121 space group and 2 a monoclinic P21 one. Compounds 1 and 2 are composed of five fused six-membered rings presenting a chair conformation, except for the central ring of 2, which adopts a half-chair conformation. In addition, the intra- and intermolecular parameters were studied using CCDC MOGUL analyses and Hirshfeld surfaces. 1. Introduction Terpenes are well-known secondary metabolites occurring in many plants specimens [1]. This compound class has been widely investigated due to its biological properties, as, for example, antituberculosis [2], nematostatic effects [3], anticancer [4], anti-HIV [5], and anti-inflammatory [6]. The terpenoids derivatives studied here belong to pentacyclic triterpenes (PCTT) class and they are known as 16α-hydroxyfriedelin (1) and 3-oxo-16-methylfriedel-16-ene (2). The triterpene 1 was isolated from the hexane extract of Salacia elliptica branches and its derivative 3-oxo-16-methylfriedel-16-ene (2) was obtained after dehydration accompanied by methyl migration [7]. In a previous report Duarte et al. [7] elucidated the stereochemistry of 1 and 2 using 2D-NMR (NOESY) spectroscopy and mass spectrometry (GC-MS), as well as the 13C-NMR. As part of our ongoing study on X-ray diffraction applied to establish the structural details of pentacyclic triterpenes [8–12], in this paper, we report the crystal structure of the triterpene 16α-hydroxyfriedelin (1) and its derivative 3-oxo-16-methylfriedel-16-ene (2). The X-ray diffraction (XRD) studies of triterpenes have received a meaningful use in order to access both the intra and intermolecular geometry correctly, giving an unambiguous structure determination. Here, we investigate the role of the main intermolecular interactions in the stabilization of the solid state architecture of the 1 and 2 PCTT derivatives building blocks. 2. Experimental Part 2.1. Single Crystal and X-Ray Diffraction Studies The needle-like single crystals of
References
[1]
R. Brünning and H. Wagner, “A review of the constituents of the Celastraceae: chemistry, chemotaxonomy, biosynthesis and pharmacology [drug plants],” Phytochemistry, vol. 17, no. 11, pp. 1821–1858, 1978.
[2]
F. Qiu, G. P. Cai, B. U. Jaki, D. C. Lankin, et al., “Quantitative purity-activity relationships of natural products: the case of anti-tuberculosis active triterpenes from oplopanax horridus,” Journal of Natural Products, vol. 76, no. 3, pp. 413–419, 2013.
[3]
M. H. dos Santos, R. S. Corrêa, M. D. Rocha, et al., “Efeito de constituintes químicos isolados da casca do fruto de rheedia gardneriana sobre a eclos?o de juvenis de meloidogyne incognita ra?a 3,” Latin American Journal of Pharmacy, vol. 26, no. 5, pp. 711–714, 2007.
[4]
V. Sudhahar, S. Ashokkumar, and P. Varalakshmi, “Effect of lupeol and lupeol linoleate on lipemic—hepatocellular aberrations in rats fed a high cholesterol diet,” Molecular Nutrition and Food Research, vol. 50, no. 12, pp. 1212–1219, 2006.
[5]
I. P. Singh, S. B. Bharate, and K. K. Bhutani, “Anti-HIV natural products,” Current Science, vol. 89, no. 2, pp. 269–290, 2005.
[6]
M. A. Fernández, B. De Las Heras, M. D. García, M. T. Sáenz, and A. Villar, “New insights into the mechanism of action of the anti-inflammatory triterpene lupeol,” Journal of Pharmacy and Pharmacology, vol. 53, no. 11, pp. 1533–1539, 2001.
[7]
L. P. Duarte, R. R. Silva De Miranda, S. B. V. Rodrigues, G. D. De Fátima Silva, S. A. V. Filho, and V. F. Knupp, “Stereochemistry of 16α-hydroxyfriedelin and 3-Oxo-16-methylfriedel- 16-ene established by 2D NMR spectroscopy,” Molecules, vol. 14, no. 2, pp. 598–607, 2009.
[8]
R. S. Corrêa, C. P. Coelho, M. H. Dos Santos, J. Ellena, and A. C. Doriguetto, “Lupeol,” Acta Crystallographica Section C, vol. 65, no. 3, pp. O97–O99, 2009.
[9]
R. S. Corrêa, S. R. Souza E Silva, L. P. Duarte et al., “Influence of hydrogen bonds on the molecular structure and conformations of two (C30H48O2) pentacyclic triterpene isomers,” Journal of Structural Chemistry, vol. 53, no. 1, pp. 156–163, 2012.
[10]
A. C. Doriguetto, L. P. Duarte, J. A. Ellena, G. D. F. Silva, Y. P. Mascarenhas, and A. B. Cota, “3-Oxoolean-12-en-20-yl α-methylcarboxylate,” Acta Crystallographica Section E, vol. 59, no. 2, pp. O164–O166, 2003.
[11]
G. D. F. Silva, L. P. Duarte, S. A. Vieira Filho et al., “Epikatonic acid from Austroplenckia populnea: structure elucidation by 2D NMR spectroscopy and X-ray crystallography,” Magnetic Resonance in Chemistry, vol. 40, no. 5, pp. 366–370, 2002.
[12]
A. A. Pimenta Jr., S. R. De Souza E Silva, G. D. De Fátima Silva, L. C. De Almeida Barbosa, J. Ellena, and A. C. Doriguetto, “A pentacyclic triterpene from Maytenus imbricata: structure elucidation by X-ray crystallography,” Structural Chemistry, vol. 17, no. 1, pp. 149–153, 2006.
[13]
Enraf-Nonius, COLLECT, Nonius BV, Delft, The Netherlands, 1997.
[14]
Z. Otwinowski and W. Minor, “Processing of X-ray diffraction data collected in oscillation mode,” Methods in Enzymology, vol. 276, pp. 307–326, 1997.
[15]
G. M. Sheldrick, “A short history of SHELX,” Acta Crystallographica Section A, vol. 64, no. 1, pp. 112–122, 2008.
[16]
H. D. Flack, “On enantiomorph-polarity estimation,” Acta Crystallographica Section A, vol. 39, no. 6, pp. 876–881, 1983.
[17]
L. J. Farrugia, “WinGX suite for small-molecule single-crystal crystallography,” Journal of Applied Crystallography, vol. 32, no. 4, pp. 837–838, 1999.
[18]
C. F. Macrae, P. R. Edgington, P. McCabe et al., “Mercury: visualization and analysis of crystal structures,” Journal of Applied Crystallography, vol. 39, no. 3, pp. 453–457, 2006.
[19]
L. J. Farrugia, “ORTEP-3 for windows—a version of ORTEP-III with a graphical user interface (GUI),” Journal of Applied Crystallography, vol. 30, no. 5, p. 565, 1997.
[20]
I. J. Bruno, J. C. Cole, M. Kessler et al., “Retrieval of crystallographically-derived molecular geometry information,” Journal of Chemical Information and Computer Sciences, vol. 44, no. 6, pp. 2133–2144, 2004.
[21]
F. H. Allen, “The Cambridge Structural Database: a quarter of a million crystal structures and rising,” Acta Crystallographica Section B, vol. 58, no. 3, pp. 380–388, 2002.
[22]
S. K. Wolff, D. J. Grimwood, J. J. McKinnon, D. Jayatilaka, and M. A. Spackman, CrystalExplorer 2. 1, University of Western Australia, Perth, Australia, 2001.
[23]
M. A. Spackman and D. Jayatilaka, “Hirshfeld surface analysis,” CrystEngComm, vol. 11, no. 1, pp. 19–32, 2009.
[24]
J. J. McKinnon, M. A. Spackman, and A. S. Mitchell, “Novel tools for visualizing and exploring intermolecular interactions in molecular crystals,” Acta Crystallographica Section B, vol. 60, no. 6, pp. 627–668, 2004.
[25]
M. A. Spackman, J. J. McKinnon, and D. Jayatilaka, “Electrostatic potentials mapped on Hirshfeld surfaces provide direct insight into intermolecular interactions in crystals,” CrystEngComm, vol. 10, no. 4, pp. 377–388, 2008.