| [1] | Geiger B, Bershadsky A, Pankov R, Yamada KM (2001) Transmembrane crosstalk between the extracellular matrix–cytoskeleton crosstalk. Nat Rev Mol Cell Biol 2: 793–805.
|
| [2] | Taber LA (2009) Towards a unified theory for morphomechanics. Philos Transact A Math Phys Eng Sci 367: 3555–3583.
|
| [3] | Vogel V, Sheetz M (2006) Local force and geometry sensing regulate cell functions. Nat Rev Mol Cell Biol 7: 265–275.
|
| [4] | Rohr S (2009) Myofibroblasts in diseased hearts: new players in cardiac arrhythmias? Heart Rhythm 6: 848–856.
|
| [5] | Fredberg JJ (2002) Airway narrowing in asthma: does speed kill? Am J Physiol Lung Cell Mol Physiol 283: L1179–1180.
|
| [6] | An SS, Fredberg JJ (2007) Biophysical basis for airway hyperresponsiveness. Canadian journal of physiology and pharmacology 85: 700–714.
|
| [7] | Discher D, Dong C, Fredberg JJ, Guilak F, Ingber D, et al. (2009) Biomechanics: cell research and applications for the next decade. Annals of biomedical engineering 37: 847–859.
|
| [8] | Fabry B, Fredberg JJ (2007) Mechanotransduction, asthma, and airway smooth muscle. Drug discovery today Disease models 4: 131–137.
|
| [9] | Fredberg JJ (2004) Bronchospasm and its biophysical basis in airway smooth muscle. Respiratory research 5: 2.
|
| [10] | Lenormand G, Fredberg JJ (2006) Deformability, dynamics, and remodeling of cytoskeleton of the adherent living cell. Biorheology 43: 1–30.
|
| [11] | Nguyen TT, Fredberg JJ (2008) Strange dynamics of a dynamic cytoskeleton. Proceedings of the American Thoracic Society 5: 58–61.
|
| [12] | Shore SA, Fredberg JJ (2005) Obesity, smooth muscle, and airway hyperresponsiveness. The Journal of allergy and clinical immunology 115: 925–927.
|
| [13] | Waters CM, Sporn PH, Liu M, Fredberg JJ (2002) Cellular biomechanics in the lung. American journal of physiology Lung cellular and molecular physiology 283: L503–509.
|
| [14] | Gabbiani G (2003) The myofibroblast in wound healing and fibrocontractive diseases. J Pathol 200: 500–503.
|
| [15] | Wight TN, Potter-Perigo S (2011) The extracellular matrix: an active or passive player in fibrosis? American journal of physiology Gastrointestinal and liver physiology 301: G950–955.
|
| [16] | Krishnan R, Park CY, Lin YC, Mead J, Jaspers RT, et al. (2009) Reinforcement versus fluidization in cytoskeletal mechanoresponsiveness. PLoS One 4: e5486.
|
| [17] | Trepat X, Deng L, An SS, Navajas D, Tschumperlin DJ, et al. (2007) Universal physical responses to stretch in the living cell. Nature 447: 592–595.
|
| [18] | Krishnan R, Peruski Canovic E, Iordan AL, Rajendran K, Manomohan G, et al.. (2012) Fluidization, resolidification and reorientation of the endothelial cell in response to slow tidal stretches. American journal of physiology Cell physiology.
|
| [19] | Nekouzadeh A, Pryse KM, Elson EL, Genin GM (2008) Stretch-activated force shedding, force recovery, and cytoskeletal remodeling in contractile fibroblasts. J Biomech 41: 2964–2971.
|
| [20] | Riedl J, Crevenna AH, Kessenbrock K, Yu JH, Neukirchen D, et al. (2008) Lifeact: a versatile marker to visualize F-actin. Nature methods 5: 605–607.
|
| [21] | Wakatsuki T, Kolodney MS, Zahalak GI, Elson EL (2000) Cell mechanics studied by a reconstituted model tissue. Biophys J 79: 2353–2368.
|
| [22] | Lee S-L (2011) Cellular and Cytoskeletal Responses of Myofibroblasts in Three Dimensional Culture to Mechanical Stretch. Ph. D. Dissertation, Washington University. Electronic Theses and Dissertations Paper 201.
|
| [23] | Riento K, Ridley AJ (2003) Rocks: multifunctional kinases in cell behaviour. Nature Reviews Molecular Cell Biology 4: 446–456.
|
| [24] | Thastrup O, Cullen PJ, Drobak BK, Hanley MR, Dawson AP (1990) Thapsigargin, a tumor promoter, discharges intracellular Ca2+ stores by specific inhibition of the endoplasmic reticulum Ca2(+)-ATPase. Proc Natl Acad Sci U S A 87: 2466–2470.
|
| [25] | Nekouzadeh A, Genin GM (2011) Quantification of fibre polymerization through Fourier space image analysis. Proceedings of the Royal Society a-Mathematical Physical and Engineering Sciences 467: 2310–2329.
|
| [26] | Hsu HJ, Lee CF, Kaunas R (2009) A dynamic stochastic model of frequency-dependent stress fiber alignment induced by cyclic stretch. PLoS One 4: e4853.
|
| [27] | Kaunas R, Hsu HJ (2009) A kinematic model of stretch-induced stress fiber turnover and reorientation. Journal of theoretical biology 257: 320–330.
|
| [28] | Hsu HJ, Lee CF, Locke A, Vanderzyl SQ, Kaunas R (2010) Stretch-induced stress fiber remodeling and the activations of JNK and ERK depend on mechanical strain rate, but not FAK. PLoS One 5: e12470.
|
| [29] | Kaunas R, Nguyen P, Usami S, Chien S (2005) Cooperative effects of Rho and mechanical stretch on stress fiber organization. Proceedings of the National Academy of Sciences of the United States of America 102: 15895–15900.
|
| [30] | Kaunas R, Usami S, Chien S (2006) Regulation of stretch-induced JNK activation by stress fiber orientation. Cell Signal 18: 1924–1931.
|
| [31] | McGarry JP (2009) Characterization of cell mechanical properties by computational modeling of parallel plate compression. Ann Biomed Eng 37: 2317–2325.
|
| [32] | Deshpande VS, McMeeking RM, Evans AG (2006) A bio-chemo-mechanical model for cell contractility. Proc Natl Acad Sci U S A 103: 14015–14020.
|
| [33] | De R, Safran SA (2008) Dynamical theory of active cellular response to external stress. Phys Rev E Stat Nonlin Soft Matter Phys 78: 031923.
|
| [34] | De R, Zemel A, Safran SA (2010) Theoretical concepts and models of cellular mechanosensing. Methods Cell Biol 98: 143–175.
|
| [35] | Zemel A, Rehfeldt F, Brown AE, Discher DE, Safran SA (2010) Optimal matrix rigidity for stress fiber polarization in stem cells. Nat Phys 6: 468–473.
|
| [36] | Zemel A, Rehfeldt F, Brown AE, Discher DE, Safran SA (2010) Cell shape, spreading symmetry and the polarization of stress-fibers in cells. J Phys Condens Matter 22: 194110.
|
| [37] | Zemel A, Safran SA (2007) Active self-polarization of contractile cells in asymmetrically shaped domains. Phys Rev E Stat Nonlin Soft Matter Phys 76: 021905.
|
| [38] | Wolfenson H, Henis YI, Geiger B, Bershadsky AD (2009) The heel and toe of the cell's foot: a multifaceted approach for understanding the structure and dynamics of focal adhesions. Cell motility and the cytoskeleton 66: 1017–1029.
|
| [39] | Lee CF, Haase C, Deguchi S, Kaunas R (2010) Cyclic stretch-induced stress fiber dynamics – dependence on strain rate, Rho-kinase and MLCK. Biochem Biophys Res Commun 401: 344–349.
|
| [40] | Totsukawa G, Yamakita Y, Yamashiro S, Hartshorne DJ, Sasaki Y, et al. (2000) Distinct roles of ROCK (Rho-kinase) and MLCK in spatial regulation of MLC phosphorylation for assembly of stress fibers and focal adhesions in 3T3 fibroblasts. The Journal of cell biology 150: 797–806.
|
| [41] | Small JV, Rottner K, Kaverina I, Anderson KI (1998) Assembling an actin cytoskeleton for cell attachment and movement. Biochim Biophys Acta 1404: 271–281.
|
| [42] | Friedrich BM, Buxboim A, Discher DE, Safran SA (2011) Striated Acto-Myosin Fibers Can Reorganize and Register in Response to Elastic Interactions with the Matrix. Biophysical Journal 100: 2706–2715.
|
| [43] | De R, Zemel A, Safran SA (2010) Theoretical concepts and models of cellular mechanosensing. Methods in cell biology 98: 143–175.
|
| [44] | Chen C, Krishnan R, Zhou E, Ramachandran A, Tambe D, et al. (2010) Fluidization and resolidification of the human bladder smooth muscle cell in response to transient stretch. PLoS One 5: e12035.
|
| [45] | Felder S, Elson EL (1990) Mechanics of fibroblast locomotion: quantitative analysis of forces and motions at the leading lamellas of fibroblasts. J Cell Biol 111: 2513–2526.
|
| [46] | Forscher P, Smith SJ (1988) Actions of cytochalasins on the organization of actin filaments and microtubules in a neuronal growth cone. J Cell Biol 107: 1505–1516.
|
| [47] | Verkhovsky AB, Svitkina TM, Borisy GG (1999) Network contraction model for cell translocation and retrograde flow. Biochem Soc Symp 65: 207–222.
|
| [48] | Byers HR, Fujiwara K (1982) Stress fibers in cells in situ: immunofluorescence visualization with antiactin, antimyosin, and anti-alpha-actinin. The Journal of cell biology 93: 804–811.
|
| [49] | Haviv L, Gov N, Ideses Y, Bernheim-Groswasser A (2008) Thickness distribution of actin bundles in vitro. European Biophysics Journal 37: 447–454.
|
| [50] | Friedrich BM, Fischer-Friedrich E, Gov NS, Safran SA (2012) Sarcomeric Pattern Formation by Actin Cluster Coalescence. PLoS Computational Biology 8: e1002544.
|
| [51] | Marquez JP, Elson EL, Genin GM (2010) Whole cell mechanics of contractile fibroblasts: relations between effective cellular and extracellular matrix moduli. Philos Transact A Math Phys Eng Sci 368: 635–654.
|
| [52] | Legant WR, Miller JS, Blakely BL, Cohen DM, Genin GM, et al. (2010) Measurement of mechanical tractions exerted by cells in three-dimensional matrices. Nat Methods 7: 969–971.
|
| [53] | Zahalak GI, Wagenseil JE, Wakatsuki T, Elson EL (2000) A cell-based constitutive relation for bio-artificial tissues. Biophysical journal 79: 2369–2381.
|
