| [1] | Dervaux J, Amar M. B (2008) Morphogenesis of growing soft tissues. Physical Review Letters 101: 068101.
|
| [2] | Goriely A, Amar M. B (2007) On the definition and modeling of incremental, cumulative, and continuous growth laws in morphoelasticity. Biomechanics and Modeling in Mechanobiology 6: 298–296.
|
| [3] | Lindenmayer A (1984) Models for plant tissue development with cell division orientation regulated by preprophase bands of microtubules. Differentiation 26: 1–10.
|
| [4] | Coen E, Rolland-Lagan A-G, Matthews M, Bangham J. A, Prusinkiewicz P (2004) The genetics of geometry. PNAS 101: 4728–4735.
|
| [5] | Kennaway J. R, Coen E, Green A. A, Bangham J. A (2010) Generation of diverse biological forms through combinatorial interactions between tissue polarity and growth. manuscript submitted.
|
| [6] | Luo D, Carpenter R, Copsey L, Vincent C, Clark J, et al. (1999) Control of organ asymmetry in flowers of Antirrhinum. Cell 99: 367–376.
|
| [7] | Corley S. B, Carpenter R, Copsey L, Coen E (2005) Floral asymmetry involves an interplay between TCP and MYB transcription factors in Antirrhinum. PNAS 102: 5068–5073.
|
| [8] | Costa M. M. R, Fox S, Hanna A. I, Baxter C, Coen E (2005) Evolution of regulatory interactions controlling floral asymmetry. Development 132: 5093–5101.
|
| [9] | Almeida J, Rocheta M, Galego L (1997) Genetic control of flower shape in Antirrhinum majus. Development 124: 1387–1392.
|
| [10] | Galego L, Almeida J (2002) Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers. Genes & Development 16: 880–891.
|
| [11] | Cui M-L, Copsey L, Green A. A, Bangham J. A, Coen E (2010) Quantitative control of organ shape by combinatorial gene activity. PLoS Biology 10(11): e1000538. doi:10.1371/journal.pbio.1000538.
|
| [12] | Vincent C. A, Coen E. S (2004) A temporal and morphological framework for flower development in Antirrhinum majus. Canadian Journal of Botany/Revue Canadienne de Botanique 82: 681–690.
|
| [13] | Rolland-Lagan A-G, Bangham J. A, Coen E (2003) Growth dynamics underlying petal shape and asymmetry. Nature 422: 161–163.
|
| [14] | Harrison B. J, Fincham J. R. S (1964) Instability at the PAL locus in Antirrhinum Majus.I. Effects of environment on frequencies of somatic and germinal mutation. Heredity 19: 237–242.
|
| [15] | Sharpe J, Ahlgren U, Perry P, Hill B, Ross A, et al. (2002) Optical projection tomography as a tool for 3D microscopy and gene expression studies. Science 296: 541–545.
|
| [16] | Boot M. J, Westerberg C. H, Sanz-Esquerro J, Cotterell J, Schweitzer R, et al. (2008) In vitro whole-organ imaging: 4D quantification of growing mouse limb buds. Nature Methods 5: 609–612.
|
| [17] | Lee K, Avondo J, Morrison H, Blot L, Stark M, et al. (2006) Visualising plant development and gene expression in three dimensions using Optical Projection Tomography. Plant Cell 18: 2145–2156.
|
| [18] | Hejnowicz Z, Romberger J. A (1984) Growth tensor of plant organs. Journal of Theoretical Biology 110: 93–114.
|
| [19] | Vincent C. A, Carpenter R, Coen E. S (1995) Cell lineage patterns and homeotic gene activity during Antirrhinum flower development. Current Biology 5: 1449–1458.
|
| [20] | Rolland-Lagan A-G, Coen E, Impey S. J, Bangham J. A (2005) A computational method for inferring growth parameters and shape changes during development based on clonal analysis. Journal of Theoretical Biology 232: 157–177.
|
| [21] | Hamant O, Traas J, Boudaoud A (2010) Regulation of shape and patterning in plant development. Curr Opin Genet Dev 20: 1–6.
|
| [22] | Dupuy L, Mackenzie J, Rudge T, Haseloff J (2008) A system for modelling cell-cell interactions during plant morphogenesis. Annals of Botany 101: 1255–1265.
|
| [23] | Dumais J, Shaw S. L, Steele C. R, Long S. R, Ray P. M (2006) An anisotropic-viscoplastic model of plant cell morphogenesis by tip growth. International Journal of Developmental Biology 50: 209–222.
|
| [24] | de Boer M. J. M, Fracchia D, Prusinkiewicz P (1992) A model for cellular development in morphogenetic fields. In: Rozenberg G, Salomaa A, editors. Lindenmayer systems. Berlin: Springer. pp. 351–370.
|
| [25] | Prusinkiewicz P, Lindenmayer A (1990) The algorithmic beauty of plants:. New York: Springer Verlag.
|
| [26] | Roeder A. H, Chickarmane V, Cunha A, Obara B, Manjunath B. S, et al. (2010) Variability in the control of cell division underlies sepal epidermal patterning in Arabidopsis thaliana. PLoS Biol 8: e1000367. doi:10.1371/journal.pbio.1000367.
|
| [27] | Le Garrec J-F, Lopez P, Kerszberg M (2006) Establishment and maintenance of planar epithelial cell polarity by asymmetric cadherin bridges: a computer model. Developmental Dynamics 235: 235–246.
|
| [28] | Zallen J. A (2007) Planar polarity and tissue morphogenesis. Cell 129: 1051–1063.
|
| [29] | Richards O. W, Kavanagh A. J (1943) The analysis of the relative growth gradients and changing form of growing organisms: Illustrated by the Tobacco leaf. The American Naturalist 127: 385–399.
|
| [30] | Gaudin V, Lunness P. A, Fobert P. R, Towers M, Riou-Khamlichi C, et al. (2000) The expression of D-CYCLIN genes defines distinct developmental zones in snapdragon apical meristems and is locally regulated by the CYCLOIDEA gene. Plant Physiology 122: 1137–1148.
|
| [31] | Nakielski J (2008) The tensor-based model for growth and cell divisions of the root apex. I. The significance of principal directions. Planta 228: 179–189.
|
| [32] | Hamant O, Heisler M. G, Jonsson H, Krupinski P, Uyttewaal M, et al. (2008) Developmental patterning by mechanical signals in Arabidopsis. Science 322: 1650–1655.
|
| [33] | Grebe M (2004) Ups and downs of tissue and planar polarity in plants. Bioessays 26: 719–729.
|
| [34] | Dhonukshe P, Tanaka H, Goh T, Ebine K, Mahonen A. P, et al. (2008) Generation of cell polarity in plants links endocytosis, auxin distribution and cell fate decisions. Nature 456: 962–966.
|
| [35] | Sabatini S, Beis D, Wolkenfelt H, Murfett J, Guilfoyle T, et al. (1999) An auxin-dependent distal organizer of pattern and polarity in the Arabidopsis root. Cell 99: 463–472.
|
| [36] | Reinhardt D, Pesce E. R, Stieger P, Mandel T, Baltensperger K, et al. (2003) Regulation of phyllotaxis by polar auxin transport. Nature 426: 255–260.
|
| [37] | Lecuit T, Lenne P-F (2007) Cell surface mechanics and the control of cell shape, tissue patterns and morphogenesis. Nature Reviews Molecular Cell Biology 8: 633–644.
|
| [38] | Peters W. S, Tomos A. D (1996) The history of tissue tension. Annals of Botany 77: 657–665.
|
| [39] | Cosgrove D (2005) Growth of the plant cell wall. Nature Reviews Molecular Cell Biology 6: 850–861.
|
| [40] | Vandiver R, Goriely A (2008) Tissue tension and axial growth of cylindrical structures in plants and elastic tissues. Europhysics Letters 84: 58004.
|
| [41] | Rodriguez E. K, Hoger A, McCulloch A. D (1994) Stress-dependent finite growth in soft elastic tissues. Journal of Biomechanics 27: 455–467.
|
| [42] | Hejnowicz Z, Sievers A (1996) Tissue stresses in organs of herbaceous plants III. Elastic properties of tissues of sunflower hypocotyle and origin of tissue stresses. Journal of Experimental Botany 47: 519–528.
|
| [43] | Weberling F (1992) Morphology of flowers and inflorescences. Cambridge: Cambridge University Press.
|
| [44] | Hodges S. A, Arnold M. L (1995) Spurring plant diversification: Are floral nectar spurs a key evolutionary innovation? Proceedings of the Royal Society of London, Series B: Biological Sciences 262: 343–348.
|
| [45] | Southam P, Strasser J, Lee K, Avondo J, Bangham A (2009) UFEEL: using haptics and stereo to place landmarks in three-dimensional volumetric images. International Conference on Image Processing Cairo.
|
