| [1] | Ankney CD, Dennis DG, Wishard LN, Seeb JE (1986) Low genic variation between Black Ducks and Mallards. Auk 103: 701–709.
|
| [2] | [AOU] The American Ornithologists' Union (1998) Check-list of North American birds, 7th edition. Lawrence, Kansas: AOU Press. 829 p.
|
| [3] | Avise JC, Walker D (1998) Pleistocene phylogeographic effects on avian populations and the speciation process. Proc R Soc Lond B Bio Sci 265: 457–463.
|
| [4] | Avise JC, Walker D (1999) Species realities and numbers in sexual vertebrates: Perspectives from an asexually transmitted genome. Proc Natl Acad Sci U S A 96: 992–995.
|
| [5] | Avise JC, Zink RM (1988) Molecular genetic divergence between avian sibling species: King and Clapper rails, Long-billed and Short-billed dowitchers, Boated-tailed and Great-tailed grackles, and Tufted and Black-crested titmice. Auk 105: 516–528.
|
| [6] | Avise JC, Arnold J, Ball RM, Bermingham E, Lamb T, et al. (1987) Intraspecific phylogeography: The mitochondrial bridge between population genetics and systematics. Annu Rev Ecol Syst 18: 489–522.
|
| [7] | Avise JC, Ankney CD, Nelson WS (1990) Mitochondrial gene trees and the evolutionary relationship of Mallard and Black Ducks. Evolution 44: 1109–1119.
|
| [8] | Banks RC, Cicero C, Dunn JL, Kratter AW, Ouellet H, et al. (2000) Forty-second supplement to the Ornithologists' Union checklist of North American birds. Auk 117: 847–858.
|
| [9] | Banks RC, Cicero C, Dunn JL, Kratter AW, Rasmussen PC, et al. (2002) Forty-third supplement to the Ornithologists' Union checklist of North American birds. Auk 119: 897–906.
|
| [10] | Banks RC, Cicero C, Dunn JL, Kratter AW, Rasmussen PC, et al. (2003) Forty-fourth supplement to the Ornithologists' Union checklist of North American birds. Auk 120: 923–931.
|
| [11] | Bates JM, Hackett SJ, Goerck JM (1999) High levels of mitochondrial DNA differentiation in two lineages of Antbirds (Drymophila and Hypocnemis). Auk 116: 1093–1106.
|
| [12] | Bensasson D, Zhang D, Hartl DL, Hewitt GM (2001) Mitochondrial pseudogenes: Evolution's misplaced witnesses. Trends Ecol Evol 16: 314–321.
|
| [13] | Blaxter M (2004) The promise of a DNA taxonomy. Philos Trans R Soc Lond B Biol Sci 359: 769–779.
|
| [14] | Brown WM, George M, Wilson AC (1979) Rapid evolution of animal mitochondrial DNA. Proc Natl Acad Sci U S A 76: 1967–1971.
|
| [15] | Cooke F, Rockwell RF, Lank DB (1995) The snow geese of La Perouse Bay: Natural selection in the wild. Oxford: Oxford University Press. 320 p.
|
| [16] | Crochet PA, Lebreton JD, Bonhomme F (2002) Systematics of large white-headed gulls: Patterns of variation in Western European taxa. Auk 119: 603–620.
|
| [17] | Crochet PA, Chen JZ, Pons JM, Lebreton JD, Hebert PDN, et al. (2003) Genetic differentiation at nuclear and mitochondrial loci among large white-headed gulls: Sex biased interspecific gene flow? Evolution 57: 2865–2878.
|
| [18] | Dove C (2000) A descriptive and phylogenetic analysis of plumulaceous feather characters in Charadriiformes. Ornith Monogr 51: 1–163.
|
| [19] | Funk DJ, Omland KE (2003) Species-level paraphyly and polyphyly: Frequency, causes and consequences, with insights from animal mitochondrial DNA. Annu Rev Ecol Evol Syst 34: 397–423.
|
| [20] | Gill FB, Slikas B (1992) Patterns of mitochondrial DNA divergence in North American crested titmice. Condor 94: 20–28.
|
| [21] | Godfrey WE (1976) Birds of Canada. Ottawa: National Museums of Canada. 428 p.
|
| [22] | Grant WS, Bowen BW (1998) Shallow population histories in deep evolutionary lineages of marine fishes: Insights from sardines and anchovies and lessons for conservation. J Hered 89: 415–427.
|
| [23] | Guglich E, Wilson PJ, White BN (1994) Forensic application of repetitive DNA markers to the species identification of animal tissues. J Forensic Sci 39: 353–361.
|
| [24] | Hackett SJ, Rosenberg KV (1990) Comparison of phenotypic and genetic differentiation in South American antwrens (Formicariidae). Auk 107: 473–489.
|
| [25] | Hebert PDN, Cywinska A, Ball SL, DeWaard JR (2003a) Biological identifications through DNA barcodes. Proc R Soc Lond B Biol Sci 270: 313–321.
|
| [26] | Hebert PDN, Ratnasingham S, DeWaard JR (2003b) Barcoding animal life: Cytochrome c oxidase subunit 1 divergences among closely related species. Proc R Soc Lond B Biol Sci 270: S596–S599.
|
| [27] | Hogg ID, Hebert PDN (2004) Biological identification of springtails (Hexapoda: Collembola) from the Canadian arctic, using DNA barcodes. Can J Zool 82: In press.
|
| [28] | Holder M, Lewis PO (2003) Phylogeny estimation: Traditional and Bayesian approaches. Nat Rev Genet 4: 275–284.
|
| [29] | Janzen DH (2004) Now is the time. Philos Trans R Soc Lond B Biol Sci 359: 731–732.
|
| [30] | Jehl JR Jr (1985) Hybridization and evolution of oystercatchers on the Pacific Coast of Baja California. Neotrop Ornith AOU Monograph 36: 484–504.
|
| [31] | Johns GC, Avise JC (1998) A comparative summary of genetic distances in the vertebrates from the mitochondrial cytochrome b gene. Mol Biol Evol 15: 1481–1490.
|
| [32] | Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111–120.
|
| [33] | Klicka J, Zink RM (1997) The importance of recent ice ages in speciation: A failed paradigm. Science 277: 1666–1669.
|
| [34] | Lee JH, Hassan H, Hill G, Cupp EW, Higazi TB, et al. (2002) Identification of mosquito avian-derived blood meals by polymerase chain reaction-heteroduplex analysis. Am J Trop Med Hyg 66: 599–604.
|
| [35] | Madge S, Burn H (1994) Crows and Jays. Princeton: Princeton University Press. 216 p.
|
| [36] | Mayr E, Short LL (1970) Species taxa of North American birds: A contribution to comparative systematics. Cambridge, Massachusetts: Nuttall Ornithological Club. 127 p.
|
| [37] | Michael E, Ramaiah KD, Hoti SL, Barker G, Paul MR, et al. (2001) Quantifying mosquito biting patterns on humans by DNA fingerprinting of bloodmeals. Am J Trop Med Hyg 65: 722–728.
|
| [38] | Mila B, Girman DJ, Kimura M, Smith TB (2000) Genetic evidence for the effect of a postglacial population expansion on the phylogeography of a North American songbird. Proc R Soc Lond B Biol Sci 267: 1033–1040.
|
| [39] | Miller EH (1996) Acoustic differentiation and speciation in shorebirds. In: Kroodsma DE, Miller EH, editors. Ecology and evolution of acoustic communication in birds. Ithaca: Comstock/Cornell University Press. pp. 241–257.
|
| [40] | Mindell DP, Sorenson MD, Huddleston CJ, Miranda HC, Knight A, et al. (1997) Phylogenetic relationships among and within select avian orders based on mitochondrial DNA. In: Mindell DP, editor. Avian molecular evolution and systematics. New York: Academic Press. pp. 214–247.
|
| [41] | Moore WS (1995) Inferring phylogenies from mtDNA variation: Mitochondrial-gene trees versus nuclear-gene trees. Evolution 49: 718–726.
|
| [42] | Murray BW, McGillivray WB, Barlow JC, Beech RN, Strobeck C (1994) The use of cytochrome B sequence variation in estimation of phylogeny in the Vireonidae. Condor 96: 1037–1054.
|
| [43] | Omland KE, Marzluff J, Boarman W, Tarr CL, Fleischer RC (2000) Cryptic genetic variation and paraphyly in ravens. Proc R Soc Lond B Biol Sci 267: 2475–2482.
|
| [44] | Palumbi SR, Cipriano F (1998) Species identification using genetic tools: The value of nuclear and mitochondrial gene sequences in whale conservation. J Hered 89: 459–464.
|
| [45] | Pereira SL, Baker AJ (2004) Low number of mitochondrial pseudogenes in the chicken (Gallus gallus) nuclear genome: Implications for molecular inference of population history and phylogenetics. BMC Evol Biol 4: 17.
|
| [46] | Phuc HK, Ball AJ, Son L, Hahn NV, Tu ND, et al. (2003) Multiplex PCR assay for malaria vector and four related species in the Myzomyia series from Southeast Asia. Med Vet Entomol 17: 423–428.
|
| [47] | Ryan PG, Bloomer P (1999) The Long-Billed Lark complex: A species mosaic in southwestern Africa. Auk 116: 194–208.
|
| [48] | Saitou N, Nei M (1987) The neighbour-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406–425.
|
| [49] | Sibley CG, Monroe BL (1990) Distribution and taxonomy of birds of the world. New Haven: Yale University Press. 1111 p.
|
| [50] | Sorenson MD, Quinn TW (1998) Numts: A challenge for avian systematics and population biology. Auk 115: 214–221.
|
| [51] | Stoeckle M (2003) Taxonomy, DNA and the bar code of life. BioScience 53: 2–3.
|
| [52] | Symondson WOC (2002) Molecular identification of prey in predator diets. Mol Ecol 83: 137–147.
|
| [53] | Thalmann O, Hebler J, Poinar HN, Paabo S, Vigilant L (2004) Unreliable mtDNA data due to nuclear insertions: A cautionary tale from analysis of humans and other great apes. Mol Ecol 13: 321–335.
|
| [54] | Weibel AC, Moore WS (2002) Molecular phylogeny of a cosmopolitan group of woodpeckers (genus Picoides) based on COI and cyt b mitochondrial gene sequences. Mol Phylogenet Evol 22: 65–75.
|
| [55] | Wells MG (1998) World bird species checklist: With alternative English and scientific names. Bushey: Worldlist. 671 p.
|
| [56] | Wilson EO (2003) The encyclopedia of life. Trends Ecol Evol 18: 77–80.
|
| [57] | Woese CR (2000) Interpreting the universal phylogenetic tree. Proc Natl Acad Sci U S A 97: 8392–8396.
|
| [58] | Woese CR, Fox GE (1977) Phylogenetic structure of the prokaryotic domain: The primary kingdoms. Proc Natl Acad Sci U S A 74: 5088–5090.
|
| [59] | Zink RM, Blackwell-Rago RC (2000) Species limits and recent population history in the curve-billed thrasher. Condor 102: 881–887.
|
| [60] | Zink RM, Weckstein JD (2003) Recent evolutionary history of the fox sparrows (genus: Passerella). Auk 120: 522–527.
|
| [61] | Zink RM, Rohwer S, Andreev AV, Dittmann DL (1995) Trans-Beringia comparisons of mitochondrial DNA differentiation in birds. Condor 97: 639–649.
|
| [62] | Zink RM, Rohwer S, Drovetski S, Blackwell-Rago RC, Farrell SL (2002) Holarctic phylogeography and species limits of three-toed woodpeckers. Condor 104: 167–170.
|
