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Reconstructing the 2003/2004 H3N2 influenza epidemic in Switzerland with a spatially explicit, individual-based model

DOI: 10.1186/1471-2334-11-115

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Abstract:

We present a spatially explicit, individual-based simulation model of influenza spread. The simulation model bases upon (i) simulated human travel data, (ii) data on human contact patterns and (iii) empirical knowledge on the epidemiology of influenza. For model validation we compare the simulation outcomes with empirical knowledge regarding (i) the shape of the epidemic curve, overall infection rate and reproduction number, (ii) age-dependent infection rates and time of infection, (iii) spatial patterns.The simulation model is capable of reproducing the shape of the 2003/2004 H3N2 epidemic curve of Switzerland and generates an overall infection rate (14.9 percent) and reproduction numbers (between 1.2 and 1.3), which are realistic for seasonal influenza epidemics. Age and spatial patterns observed in empirical data are also reflected by the model: Highest infection rates are in children between 5 and 14 and the disease spreads along the main transport axes from west to east.We show that finding evidence for the validity of simulation models of influenza spread by challenging them with seasonal influenza outbreak data is possible and promising. Simulation models for pandemic spread gain more credibility if they are able to reproduce seasonal influenza outbreaks. For more robust modelling of seasonal influenza, serological data complementing sentinel information would be beneficial.Mathematical models and computer simulations of influenza spread have become increasingly important for pandemic preparedness within the last few years and have influenced the decisions of public health authorities [1,2]. A non-systematic search in the common publication databases identified plenty of studies modelling the spread of (mostly pandemic) influenza outbreaks [3-13]. However, models of pandemic spread are in most cases hypothetical because they focus on future pandemics [e.g. [6,7,10-13]] and, thus, are not validated with empirical data. In contrast, some models of historical ca

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