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The taxonomic status of the endangered thin-spined porcupine, Chaetomys subspinosus (Olfers, 1818), based on molecular and karyologic data

DOI: 10.1186/1471-2148-9-29

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Abstract:

All topologies recovered in our molecular phylogenetic analyses strongly supported Chaetomys subspinosus as a sister clade of the erethizontids. Cytogenetically, Chaetomys subspinosus showed 2n = 52 and FN = 76. Although the sexual pair could not be identified, we assumed that the X chromosome is biarmed. The karyotype included 13 large to medium metacentric and submetacentric chromosome pairs, one small subtelocentric pair, and 12 small acrocentric pairs. The subtelocentric pair 14 had a terminal secondary constriction in the short arm, corresponding to the nucleolar organizer region (Ag-NOR), similar to the erethizontid Sphiggurus villosus, 2n = 42 and FN = 76, and different from the echimyids, in which the secondary constriction is interstitial.Both molecular phylogenies and karyotypical evidence indicated that Chaetomys is closely related to the Erethizontidae rather than to the Echimyidae, although in a basal position relative to the rest of the Erethizontidae. The high levels of molecular and morphological divergence suggest that Chaetomys belongs to an early radiation of the Erethizontidae that may have occurred in the Early Miocene, and should be assigned to its own subfamily, the Chaetomyinae.The family Erethizontidae, the New World porcupines, is widely considered a primitive clade among caviomorph rodents, and probably diverged early in the evolutionary history of the New World hystricognaths (e.g. [1-3]). Some authors have suggested that the family may represent an independent early invasion of hystricognath rodents in South America (e.g. [1]), as the family Hystricidae may represent a separate colonization of hystricognaths in Africa [4]. The Erethizontidae is restricted to the New World and comprises about 15 extant species [5].In a study on Neotropical porcupines, Voss and Angermann [6] clarified the taxonomy of some erethizontids. However, Bonvicino et al. [7] noted that the status of several taxa in this family and their phylogenetic relationships a

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