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BMC Bioinformatics 2006
Epigenetic acquisition of inducibility of type III cytotoxicity in P. aeruginosaAbstract: Using the generalised logical method, we designed a minimal model of the TTSS regulatory network that could support the epigenetic hypothesis, and studied its dynamics which helped to define a discriminating experimental scenario sufficient to validate the epigenetic hypothesis. A mathematical framework based on formal methods from computer science allowed a rigorous validation and certification of parameters of this model leading to epigenetic behaviour. Then, we demonstrated that a non inducible strain of P. aeruginosa can stably acquire the capacity to be induced by calcium depletion for the TTSS after a short pulse of a regulatory protein. Finally, the increased cytotoxicity of a strain after this epigenetic switch was demonstrated in vivo in an acute pulmonary infection model.These results may offer new perspectives for therapeutic strategies to prevent lethal infections by P. aeruginosa by reverting the epigenetic inducibility of type III cytotoxicity.Pseudomonas aeruginosa is a Gram-negative opportunistic pathogen associated with sepsis in burned, neutropenic, and intensive care patients as well as with severe chronic lung injury in cystic fibrosis and chronic obstrusive pneumonia disease[1]. Cytotoxic P. aeruginosa inject toxins from their cytoplasm into eukaryotic target cells through a protein secretory apparatus, the type III secretion system (TTSS)[2]. Activation of this system (especially toxins production and secretion) is dependant on the contact between the bacteria and the host cells in vivo and could be triggered by calcium depletion of the growth medium in vitro. TTSS is encoded by three classes of genes coding the secretion apparatus, the toxins and the regulators. Four TTSS toxins are known in P. aeruginosa to be secreted through the TTTS: ExoS, ExoT, ExoY and ExoU. All three classes of TTSS genes are co-ordinately controlled by a common transcriptional activator ExsA encoded by the exsCEBA operon, which controls its own synthesis[3]. The first
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