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OALib Journal期刊
ISSN: 2333-9721
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Analysis of similarity of DNA sequences based on a measure of information discrepancy
基于信息离散度的DNA序列相似性分析

Keywords: base pair,complete information set,FDOD,similarity
碱基对
,完全信息集,离散度函数,相似性

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Abstract:

Function of Degree of Disagreement (FDOD) has been successfully applied to the research of bioinformatics. Its performance is greatly impacted by the length of subsequence, when the information included in a sequence is described by its subsequence distribution. In this paper, we proposed a new representation called base-base information set to characterize the sequence, then computed the distance between two sequences by FDOD. The base-base information set comprises the joint probabilities of base pair at ...

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