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OALib Journal期刊
ISSN: 2333-9721
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Research on method of protein contact prediction of beta structure by extend Markov logic network
基于扩展的Markov逻辑网的蛋白质beta结构关联预测方法研究

Keywords: Markov logic network,protein contact prediction,beta-residue,neural network
Markov逻辑网
,蛋白质关联预测,beta-残基,神经网络

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Abstract:

In order to overcome the independent and identically distributed assumption and take advantage of rules and constrains in the protein,this paper presented a Markov logic network method to predict the beta-residue contact.This method could take advantage of Markov statistical relational learning framework to achieve the prediction of protein beta-residue contact.Experimental results show that this method can get better performance than other methods previously reported in the protein beta-residue contact prediction.It can be increased by 8% compared with BetaPro and 14 times of random prediction accuracy.

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