全部 标题 作者
关键词 摘要

OALib Journal期刊
ISSN: 2333-9721
费用:99美元

查看量下载量

相关文章

更多...

Isolation and Characterization of Microsatellite Markers in Brown Planthopper (Nilaparvata lugens St?l)

DOI: 10.3390/ijms13089527

Keywords: Nilaparvata lugens, microsatellites, polymorphism, genetic diversity

Full-Text   Cite this paper   Add to My Lib

Abstract:

Brown planthopper ( Nilaparvata lugens St?l) (Homoptera: Delphacidae) is an economically important pest on rice. In this study, 30 polymorphic microsatellite markers were developed from N. lugens genomic libraries using the method of Fast Isolation by AFLP of Sequence Containing Repeats (FIASCO). Polymorphism of each locus was detected in 48 individuals from two natural populations. These microsatellite loci revealed 2 to 18 alleles, and the expected and observed heterozygosities ranged from 0.042 to 0.937 and from 0.042 to 0.958, respectively. These markers will be useful for the future study of this agricultural pest in population genetics and molecular genetics.

References

[1]  Bentur, J.S.; Viraktamath, B.C. Rice planthoppers strike back. Curr. Sci 2008, 95, 441–443.
[2]  Pathak, M.D. Utilization of Insect-Plant Interactions in Pest Control. In Insects, Science and Society; Pimentel, D., Ed.; Academic Press: London, UK, 1975; pp. 121–148.
[3]  Powell, W.; Machray, G.C.; Provan, J. Polymorphism revealed by simple sequence repeats. Trends Plant Sci 1996, 1, 215–222.
[4]  Sun, J.T.; Zhang, Y.K.; Ge, C.; Hong, X.Y. Mining and characterization of sequence tagged microsatellites from the brown planthopper Nilaparvata lugens. J. Insect Sci 2011, 11, 1–11.
[5]  Liu, Y.D.; Hou, M.L. Development of EST-SSRs in the brown planthopper Nilaparvata Lugens. In permanent genetic resources added to molecular ecology resources database 1 January 2009–30 April 2009. Mol. Ecol. Resour 2009, 9, 1375–1429.
[6]  Jing, S.L.; Liu, B.F.; Peng, L.; Peng, X.X.; Zhu, L.L.; Qiang, F.; He, G.C. Development and use of EST-SSR markers for assessing genetic diversity in the brown planthopper (Nilaparvata lugens St?l). Bull. Entomol. Res 2012, 102, 113–122.
[7]  Tang, M.; Lv, L.; Jing, S.L.; Zhu, L.L.; He, G.C. Bacterial symbionts of the brown planthopper, Nilaparvata lugens (Homoptera: Delphacidae). Appl. Environ. Microbiol 2010, 76, 1740–1745.
[8]  Zane, L.; Bargelloni, L.; Patarnello, T. Strategies for microsatellite isolation: A review. Mol. Ecol 2002, 11, 1–16.
[9]  Gramene Ssrtool. Available online: http://www.gramene.org/db/markers/ssrtool , accessed on 28 July 2005.
[10]  You, F.M.; Huo, N.; Gu, Y.Q.; Luo, M.C.; Ma, Y.; Hane, D.; Lazo, G.R.; Dvorak, J.; Anderson, O.D. BatchPrimer3: A high throughput web application for PCR and sequencing primer design. BMC Bioinforma 2008, 9, doi:10.1186/1471-2105-9-253. http://www.biomedcentral.com/pubmed/18510760.
[11]  Han, Y.C.; Teng, C.Z.; Hu, Z.L.; Song, Y.C. An optimal method of DNA silver staining in polyacrylamide gels. Electrophoresis 2008, 29, 1355–1358.
[12]  Excoffier, L.; Laval, G.; Schneider, S. Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evol. Bioinforma. Online 2005, 1, 47–50.
[13]  Van Oosterhout, C.; Hutchinson, W.F.; Wills, D.P.M.; Shipley, P. MICRO-CHECKER: Software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 2004, 4, 535–538.

Full-Text

Contact Us

service@oalib.com

QQ:3279437679

WhatsApp +8615387084133