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FAST RECONSTRUCTING ALGORITHMS AND DATA STRUCTURES OF THE PHYLOGENETIC TREES FOR MICROBIAL MOLECULAR CLASSIFICATION
构建微生物分子分类系统进化树的快速运算法与数据结构

Keywords: Fast neighbour joining algorithm,Analysis and design of algorithms,Data structure,Phylogenetic tree/evolutionary tree
FNJ算法
,算法分析和设计,数据结构,系统进化树

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Abstract:

The algorithms and data structures involved in the neighbour-joining method(NJM) for the reconstructing of phylogenetic trees are introduced in this paper. Based on thedata reuse, we designed the fast neighbour-joining algorithm which can reduce the time complexity from (N5) to (N3), and the automatic plotting algorithm for cladogram.

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