| [1] | Ball S, Guan HP, James M, Myers A, Keeling P, et al. (1996) From glycogen to amylopectin: a model for the biogenesis of the plant starch granule. Cell 86: 349–352.
|
| [2] | Dauvillee D, Chochois V, Steup M, Haebel S, Eckermann N, et al. (2006) Plastidial phosphorylase is required for normal starch synthesis in Chlamydomonas reinhardtii. Plant J 48: 274–285.
|
| [3] | Satoh H, Shibahara K, Tokunaga T, Nishi A, Tasaki M, et al. (2008) Mutation of the plastidial alpha-glucan phosphorylase gene in rice affects the synthesis and structure of starch in the endosperm. Plant Cell 20: 1833–1849.
|
| [4] | Schupp N, Ziegler P (2004) The relation of starch phosphorylases to starch metabolism in wheat. Plant Cell Physiol 45: 1471–1484.
|
| [5] | Sonnewald U, Basner A, Greve B, Steup M (1995) A second L-type isozyme of potato glucan phosphorylase: cloning, antisense inhibition and expression analysis. Plant Mol Biol 27: 567–576.
|
| [6] | Hanes CS (1940) The breakdown and synthesis of starch by an enzyme system from pea seeds. Proc R Soc Lond B 128: 421–450.
|
| [7] | Hanes CS (1940) The reversible formation of starch from glucose-1-phosphate catalysed by potato phosphorylase. Proc R Soc Lond B 129: 174–208.
|
| [8] | Shimomura S, Nagai M, Fukui T (1982) Comparative glucan specificities of two types of spinach leaf phosphorylase. J Biochem 91: 703–717.
|
| [9] | Steup M (1988) Starch degradation. In: Preiss J, editor. The Biochemistry of Plants Vol 14 Carbohydrates. New York: Academic Press. pp. pp. 255–296.
|
| [10] | Yu Y, Mu HH, Wasserman BP, Carman GM (2001) Identification of the maize amyloplast stromal 112-kD protein as a plastidic starch phosphorylase. Plant Physiol 125: 351–359.
|
| [11] | Mori H, Tanizawa K, Fukui T (1993) A chimeric alpha-glucan phosphorylase of plant type L and H isozymes. Functional role of 78-residue insertion in type L isozyme. J Biol Chem 268: 5574–5581.
|
| [12] | Albrecht T, Koch A, Lode A, Greve B, Schneider-Mergener J, et al. (2001) Plastidic (Pho1-type) phosphorylase isoforms in potato (Solanum tuberosum L.) plants: expression analysis and immunochemical characterization. Planta 213: 602–613.
|
| [13] | Brisson N, Giroux H, Zollinger M, Camirand A, Simard C (1989) Maturation and subcellular compartmentation of potato starch phosphorylase. Plant Cell 1: 559–566.
|
| [14] | Duwenig E, Steup M, Kossmann J (1997) Induction of genes encoding plastidic phosphorylase from spinach (Spinacia oleracea L.) and potato (Solanum tuberosum L.) by exogenously supplied carbohydrates in excised leaf discs. Planta 203: 111–120.
|
| [15] | Mingo-Castel AM, Young RE, Smith OE (1976) Kinetin-induced tuberization of potato in vitro: on the mode of action of kinetin. Plant Cell Physiol 17: 557–570.
|
| [16] | St-pierre B, Brisson N (1995) Induction of the plastidic starch-phosphorylase gene in potato storage sink tissue. Planta 195: 339–344.
|
| [17] | Liu TT, Shannon JC (1981) Measurement of metabolites associated with nonaqueously isolated starch granules from immature Zea mays L. endosperm. Plant Physiol 67: 525–529.
|
| [18] | Baun LC, Palmiano EP, Perez CM, Juliano BO (1970) Enzymes of starch metabolism in the developing rice grain. Plant Physiol 46: 429–434.
|
| [19] | Ohdan T, Francisco PB Jr, Sawada T, Hirose T, Terao T, et al. (2005) Expression profiling of genes involved in starch synthesis in sink and source organs of rice. J Exp Bot 56: 3229–3244.
|
| [20] | Chang SC, Lin PC, Chen HM, Wu JS, Juang RH (2000) The isolation and characterization of Chaperonin 60 from sweet potato roots - Involvement of the chaperonins in starch biosynthesis. Bot Bull Academia Sin 41: 105–111.
|
| [21] | Van Berkel J, Conrads-Strauch J, Steup M (1991) Glucan-phosphorylase forms in cotyledons of Pisum sativum L.: Localization, developmental change, in-vitro translation, and processing. Planta 185: 432–439.
|
| [22] | Zeeman SC, Thorneycroft D, Schupp N, Chapple A, Weck M, et al. (2004) Plastidial alpha-glucan phosphorylase is not required for starch degradation in Arabidopsis leaves but has a role in the tolerance of abiotic stress. Plant Physiol 135: 849–858.
|
| [23] | Chiang CL, Lu YL, Juang RH, Lee PD, Su JC (1991) Native and degraded forms of sweet potato starch phosphorylase. Agric Biol Chem 55: 641–646.
|
| [24] | Chen HM, Chang SC, Wu CC, Cuo TS, Wu JS, et al. (2002) Regulation of the catalytic behaviour of L-form starch phosphorylase from sweet potato roots by proteolysis. Physiol Plant 114: 506–515.
|
| [25] | Tetlow IJ, Wait R, Lu Z, Akkasaeng R, Bowsher CG, et al. (2004) Protein phosphorylation in amyloplasts regulates starch branching enzyme activity and protein-protein interactions. Plant Cell 16: 694–708.
|
| [26] | Young GH, Chen HM, Lin CT, Tseng KC, Wu JS, et al. (2006) Site-specific phosphorylation of L-form starch phosphorylase by the protein kinase activity from sweet potato roots. Planta 223: 468–478.
|
| [27] | Coux O, Tanaka K, Goldberg AL (1996) Structure and functions of the 20S and 26S proteasomes. Annu Rev Biochem 65: 801–847.
|
| [28] | Santt O, Pfirrmann T, Braun B, Juretschke J, Kimmig P, et al. (2008) The yeast GID complex, a novel ubiquitin ligase (E3) involved in the regulation of carbohydrate metabolism. Mol Biol Cell 19: 3323–3333.
|
| [29] | Vierstra RD (2009) The ubiquitin-26S proteasome system at the nexus of plant biology. Nat Rev Mol Cell Biol 10: 385–397.
|
| [30] | Bulteau AL, Verbeke P, Petropoulos I, Chaffotte AF, Friguet B (2001) Proteasome inhibition in glyoxal-treated fibroblasts and resistance of glycated glucose-6-phosphate dehydrogenase to 20 S proteasome degradation in vitro. J Biol Chem 276: 45662–45668.
|
| [31] | Hung GC, Brown CR, Wolfe AB, Liu J, Chiang HL (2004) Degradation of the gluconeogenic enzymes fructose-1,6-bisphosphatase and malate dehydrogenase is mediated by distinct proteolytic pathways and signaling events. J Biol Chem 279: 49138–49150.
|
| [32] | Saitoh F, Araki T (2010) Proteasomal degradation of glutamine synthetase regulates schwann cell differentiation. J Neurosci 30: 1204–1212.
|
| [33] | Brown CR, Chiang HL (2009) A selective autophagy pathway that degrades gluconeogenic enzymes during catabolite inactivation. Commun Integr Biol 2: 177–183.
|
| [34] | Hardin SC, Huber SC (2004) Proteasome activity and the post-translational control of sucrose synthase stability in maize leaves. Plant Physiol Biochem 42: 197–208.
|
| [35] | Hardin SC, Tang GQ, Scholz A, Holtgraewe D, Winter H, et al. (2003) Phosphorylation of sucrose synthase at serine 170: occurrence and possible role as a signal for proteolysis. Plant J 35: 588–603.
|
| [36] | Baugh JM, Viktorova EG, Pilipenko EV (2009) Proteasomes can degrade a significant proportion of cellular proteins independent of ubiquitination. J Mol Biol 386: 814–827.
|
| [37] | Li X, Amazit L, Long W, Lonard DM, Monaco JJ, et al. (2007) Ubiquitin- and ATP-independent proteolytic turnover of p21 by the REGgamma-proteasome pathway. Mol Cell 26: 831–842.
|
| [38] | Sattelmacher B, Marschner H, Kuhne R (1990) Effects of the temperature of the rooting zone on the growth and development of roots of potato (Solanum tuberosum L.). Ann. Bot. 65: 27–36.
|
| [39] | Weng JH, Lai MF (2005) Estimating heat tolerance among plant species by two chlorophyll fluorescence parameters. Photosynthetica 43: 439–444.
|
| [40] | Varshavsky A (2005) Regulated protein degradation. Trends Biochem Sci 30: 283–286.
|
| [41] | Asher G, Tsvetkov P, Kahana C, Shaul Y (2005) A mechanism of ubiquitin-independent proteasomal degradation of the tumor suppressors p53 and p73. Genes Dev 19: 316–321.
|
| [42] | Orlowski M, Wilk S (2003) Ubiquitin-independent proteolytic functions of the proteasome. Arch Biochem Biophys 415: 1–5.
|
| [43] | Asher G, Reuven N, Shaul Y (2006) 20S proteasomes and protein degradation "by default". Bioessays 28: 844–849.
|
| [44] | Baugh JM, Pilipenko EV (2004) 20S proteasome differentially alters translation of different mRNAs via the cleavage of eIF4F and eIF3. Mol Cell 16: 575–586.
|
| [45] | Grune T, Merker K, Sandig G, Davies KJ (2003) Selective degradation of oxidatively modified protein substrates by the proteasome. Biochem Biophys Res Commun 305: 709–718.
|
| [46] | Hoyt MA, Coffino P (2004) Ubiquitin-free routes into the proteasome. Cell Mol Life Sci 61: 1596–1600.
|
| [47] | Liu CW, Corboy MJ, DeMartino GN, Thomas PJ (2003) Endoproteolytic activity of the proteasome. Science 299: 408–411.
|
| [48] | Sorokin AV, Selyutina AA, Skabkin MA, Guryanov SG, Nazimov IV, et al. (2005) Proteasome-mediated cleavage of the Y-box-binding protein 1 is linked to DNA-damage stress response. EMBO J 24: 3602–3612.
|
| [49] | Ko YT, Chang JY, Lee YT, Wu YH (2005) The identification of starch phosphorylase in the developing mungbean (Vigna radiata L.). J Agric Food Chem 53: 5708–5715.
|
| [50] | Hwang SK, Nishi A, Satoh H, Okita TW (2010) Rice endosperm-specific plastidial alpha-glucan phosphorylase is important for synthesis of short-chain malto-oligosaccharides. Arch Biochem Biophys 495: 82–92.
|
| [51] | Chen Z, Hagler J, Palombella VJ, Melandri F, Scherer D, et al. (1995) Signal-induced site-specific phosphorylation targets I kappa B alpha to the ubiquitin-proteasome pathway. Genes Dev. 9, 1586–1597:
|
| [52] | Alkalay I, Yaron A, Hatzubai A, Orian A, Ciechanover A, et al. (1995) Stimulation-dependent I kappa B alpha phosphorylation marks the NF-kappa B inhibitor for degradation via the ubiquitin-proteasome pathway. Proc Natl Acad Sci U S A. 92, 10599–10603:
|
| [53] | Tang GQ, Hardin SC, Dewey R, Huber SC (2003) A novel C-terminal proteolytic processing of cytosolic pyruvate kinase, its phosphorylation and degradation by the proteasome in developing soybean seeds. Plant J 34: 77–93.
|
| [54] | Wu YT, Ouyang W, Lazorchak AS, Liu D, Shen HM, et al. (2011) mTOR complex 2 targets Akt for proteasomal degradation via phosphorylation at the hydrophobic motif. J Biol Chem. 286, 14190–14198:
|
| [55] | Machiya Y, Hara S, Arawaka S, Fukushima S, Sato H, et al. (2010) Phosphorylated alpha-synuclein at Ser-129 is targeted to the proteasome pathway in a ubiquitin-independent manner. J Biol Chem 285: 40732–40744.
|
| [56] | Moorthy AK, Savinova OV, Ho JQ, Wang VY, Vu D, et al. (2006) The 20S proteasome processes NF-kappaB1 p105 into p50 in a translation-independent manner. EMBO J 25: 1945–1956.
|
| [57] | Buchczyk DP, Grune T, Sies H, Klotz LO (2003) Modifications of glyceraldehyde-3-phosphate dehydrogenase induced by increasing concentrations of peroxynitrite: early recognition by 20S proteasome. Biol Chem 384: 237–241.
|
| [58] | Shringarpure R, Grune T, Mehlhase J, Davies KJ (2003) Ubiquitin conjugation is not required for the degradation of oxidized proteins by proteasome. J Biol Chem 278: 311–318.
|
| [59] | Davies KJ (2001) Degradation of oxidized proteins by the 20S proteasome. Biochimie 83: 301–310.
|
| [60] | Kurepa J, Toh EA, Smalle JA (2008) 26S proteasome regulatory particle mutants have increased oxidative stress tolerance. Plant J 53: 102–114.
|
| [61] | Poppek D, Grune T (2006) Proteasomal defense of oxidative protein modifications. Antioxid Redox Signal 8: 173–184.
|
| [62] | Pacifici RE, Kono Y, Davies KJ (1993) Hydrophobicity as the signal for selective degradation of hydroxyl radical-modified hemoglobin by the multicatalytic proteinase complex, proteasome. J Biol Chem. 268, 15405–15411:
|
| [63] | Grune T, Merker K, Sandig G, Davies KJ (2003) Selective degradation of oxidatively modified protein substrates by the proteasome. Biochem Biophys Res Commun. 305, 709–718:
|
| [64] | Nakano K, Fukui T (1986) The complete amino acid sequence of potato alpha-glucan phosphorylase. J Biol Chem. 261, 8230–8236:
|
| [65] | Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248–254.
|
| [66] | Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680–685.
|
| [67] | Wang HC, Wu JS, Chia JC, Yang CC, Wu YJ, et al. (2009) Phytochelatin synthase is regulated by protein phosphorylation at a threonine residue near its catalytic site. J Agric Food Chem 57: 7348–7355.
|
| [68] | Chang TC, Lee SC, Su JC (1987) Sweet potato starch phosphorylase-purification and characterization. Agric Biol Chem 51: 187–195.
|
| [69] | Walker JM (2002) The Protein Protocols Handbook. Totowa: Humana Press. 1146 p.
|
| [70] | Sisson TH, Castor CW (1990) An improved method for immobilizing IgG antibodies on protein A-agarose. J Immunol Methods 127: 215–220.
|
