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Proteome Science

ISSN Print: 1477-5956

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Website: http://www.proteomesci.com

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Comparative proteomic analysis implicates eEF2 as a novel target of PI3Kγ in the MDA-MB-231 metastatic breast cancer cell line

Niu Meizhi,Klingler-Hoffmann Manuela,Brazzatti Julie A,Forbes Briony

Major soluble proteome changes in Deinococcus deserti over the earliest stages following gamma-ray irradiation

Dedieu Alain,Sahinovic Elodie,Guérin Philippe,Blanchard Laurence

Comparisons of protein profiles of beech bark disease resistant and susceptible American beech (Fagus grandifolia)

Mason Mary E,Koch Jennifer L,Krasowski Marek,Loo Judy

Unrestrictive identification of post-translational modifications in the urine proteome without enrichment

Liu Liu,Liu Xuejiao,Sun Wei,Li Mingxi

Comparative Proteomic Analysis of Transition of Saccharomyces cerevisiae from Glucose-Deficient Medium to Glucose-Rich Medium

Bennett J Giardina, Bruce A Stanley, Hui-Ling Chiang

Proteomic analysis of effluents from perfused human heart for transplantation: identification of potential biomarkers for ischemic heart damage

Hong Li, Jiyuan Li, Ying Wang, Tiande Yang

Production and proteomic characterisation of purified protein derivative from Mycobacterium avium subsp. paratuberculosis

James W Wynne, Brian J Shiell, Michelle L Colgrave, Jill A Vaughan, Gary Beddome, Wojtek P Michalski

Proteomics analysis of differentially expressed proteins in chicken trachea and kidney after infection with the highly virulent and attenuated coronavirus infectious bronchitis virus in vivo

Zhongzan Cao, Zongxi Han, Yuhao Shao, Xiaoli Liu, Junfeng Sun, Demin Yu, Xiangang Kong, Shengwang Liu

Serum profiling by MALDI-TOF mass spectrometry as a diagnostic tool for domoic acid toxicosis in California sea lions

Benjamin A Neely, Jennifer L Soper, Denise J Greig, Kevin P Carlin, Elizabeth G Favre, Frances MD Gulland, Jonas S Almeida, Michael G Janech

Proteomic profiling of the rat hypothalamus

Amanda P Pedroso, Regina LH Watanabe, Kelse T Albuquerque, M？nica M Telles, Maria CC Andrade, Juliana D Perez, Maísa M Sakata, Mariana L Lima, Debora Estadella, Claudia MO Nascimento, Lila M Oyama, José C Rosa, Dulce E Casarini, Eliane B Ribeiro

Proteomic analysis of purified Newcastle disease virus particles

Xiangpeng Ren, Chunyi Xue, Qingming Kong, Chengwen Zhang, Yingzuo Bi, Yongchang Cao

Clinical proteomics and OMICS clues useful in translational medicine research

Elena Lopez, Luis Madero, Juan Lopez-Pascual, Martin Latterich

A dynamic plasma membrane proteome analysis of alcohol-induced liver cirrhosis

Xiaofang Jia, Lin Yin, Yanling Feng, Xia Peng, Fang Ma, Yamin Yao, Xiaoqian Liu, Zhiyong Zhang, Zhenghong Yuan, Lijun Zhang

Vigilin interacts with signal peptide peptidase

Stephen HJ Lu, Amy HW Jeon, Gerold Schmitt-Ulms, Seema Qamar, Roger Dodd, Beth McDonald, Yi Li, William Meadows, Katie Cox, Christopher Bohm, Fusheng Chen, Paul Fraser, Peter St George-Hyslop

The role of nitric oxide on rosuvastatin-mediated S-nitrosylation and translational proteomes in human umbilical vein endothelial cells

Bin Huang, Fu An Li, Chien Hsing Wu, Danny Ling Wang

Proteins differentially expressed in elicited cell suspension culture of Podophyllum hexandrum with enhanced podophyllotoxin content

Dipto Bhattacharyya, Ragini Sinha, Srijani Ghanta, Amrita Chakraborty, Saptarshi Hazra, Sharmila Chattopadhyay

Adaptation of Salmonella enterica Hadar under static magnetic field: effects on outer membrane protein pattern

Sarra Snoussi, Alya May, Laurent Coquet, Philippe Chan, Thierry Jouenne, Ahmed Landoulsi, Emmanuelle Dé

Novel protein extraction approach using micro-sized chamber for evaluation of proteins eluted from formalin-fixed paraffin-embedded tissue sections

Keiichi Hatakeyama, Kanako Wakabayashi-Nakao, Yutaka Aoki, Shun-ichiro Ogura, Ken Yamaguchi, Takashi Nakajima, Taka-Aki Sato, Tohru Mochizuki, Isamu Hayashi

Spatiotemporal expression profiling of proteins in rat sciatic nerve regeneration using reverse phase protein arrays

David J Bryan, C Litchfield, Jeffrey V Manchio, Tanya Logvinenko, Antonia H Holway, John Austin, Ian C Summerhayes, Kimberly M Rieger-Christ

Characterisation of the vitreous proteome in proliferative diabetic retinopathy

Hao Wang, Le Feng, Jian Hu, Chun Xie, Fang Wang

Comparative proteomics between natural Microcystis isolates with a focus on microcystin synthesis

Angela Tonietto, Bernado A Petriz, Werika C Araujo, Angela Mehta, Beatriz S Magalhaes, Octavio L Franco

Optimization of iTRAQ labelling coupled to OFFGEL fractionation as a proteomic workflow to the analysis of microsomal proteins of Medicago truncatula roots

Cosette Abdallah, Kjell Sergeant, Christelle Guillier, Eliane Dumas-Gaudot, Céline Leclercq, Jenny Renaut

Protein and phosphoprotein levels in glioma and adenocarcinoma cell lines grown in normoxia and hypoxia in monolayer and three-dimensional cultures

Victor A Levin, Sonali Panchabhai, Li Shen, Keith A Baggerly

Identification of differentially accumulated proteins associated with embryogenic and non-embryogenic calli in saffron (Crocus sativus L.)

Golandam Sharifi, Hassan Ebrahimzadeh, Behzad Ghareyazie, Javad Gharechahi, Elaheh Vatankhah

Prediction and characterization of protein-protein interaction networks in swine

Fen Wang, Min Liu, Baoxing Song, Dengyun Li, Huimin Pei, Yang Guo, Jingfei Huang, Deli Zhang

Effects of human and porcine bile on the proteome of Helicobacter hepaticus

Arinze S Okoli, Mark J Raftery, George L Mendz

Treatment with captopril abrogates the altered expression of alpha1 macroglobulin and alpha1 antiproteinase in sera of spontaneously hypertensive rats

Norhaniza Aminudin, Nur-Atiqah H Abdullah, Hasni Misbah, Saiful A Karsani, Ruby Husain, See Z Hoe, Onn H Hashim

Proteomic biomarkers predicting lymph node involvement in serum of cervical cancer patients. Limitations of SELDI-TOF MS

Toon Van Gorp, Isabelle Cadron, Anneleen Daemen, Bart De Moor, Etienne Waelkens, Ignace Vergote

A proteomic analysis of liver after ethanol binge in chronically ethanol treated rats

Annayya R Aroor, Roy J Lowery, Ricardo J Restrepo, Brian P Mooney, Shivendra D Shukla

Plasma protein alterations in the refractory anemia with excess blasts subtype 1 subgroup of myelodysplastic syndrome

Pavel Májek, Zuzana Reicheltová, Jiri Suttnar, Jaroslav Cermák, Jan E Dyr

MS/MS library facilitated MRM quantification of native peptides prepared by denaturing ultrafiltration

Juraj Lenco, Renny Lan, Nathan Edwards, Radoslav Goldman

Novel immune-modulator identified by a rapid, functional screen of the parapoxvirus ovis (Orf virus) genome

Michael J McGuire, Stephen A Johnston, Kathryn F Sykes

Protein-based identification of quantitative trait loci associated with malignant transformation in two HER2+ cellular models of breast cancer

Yogesh M Kulkarni, David J Klinke

Using a spike-in experiment to evaluate analysis of LC-MS data

Leepika Tuli, Tsung-Heng Tsai, Rency S Varghese, Jun Feng Xiao, Amrita Cheema, Habtom W Ressom

Analysis of intracellular expressed proteins of Mycobacterium tuberculosis clinical isolates

Neelja Singhal, Prashant Sharma, Manish Kumar, Beenu Joshi, Deepa Bisht

Comparative analysis of excretory-secretory antigens of Trichinella spiralis and Trichinella britovi muscle larvae by two-dimensional difference gel electrophoresis and immunoblotting

Justyna Bien, Anu N？reaho, Pekka Varmanen, Katarzyna Gozdzik, Bozena Moskwa, Wladyslaw Cabaj, Tuula A Nyman, Kirsi Savijoki

Identification of putative biomarkers for the serodiagnosis of drug-resistant Mycobacterium tuberculosis

Lu Zhang, Qingzhong Wang, Wenjie Wang, Yanyan Liu, Jie Wang, Jun Yue, Ying Xu, Wenxi Xu, ZhenLing Cui, Xuelian Zhang, Honghai Wang

Proteomic analysis of the effects of exogenous calcium on hypoxic-responsive proteins in cucumber roots

Lizhong He, Xiaomin Lu, Jing Tian, Yanjuan Yang, Bin Li, Jing Li, Shirong Guo

Increasing peptide identifications and decreasing search times for ETD spectra by pre-processing and calculation of parent precursor charge

Viswanadham Sridhara, Dina L Bai, An Chi, Jeffrey Shabanowitz, Donald F Hunt, Stephen H Bryant, Lewis Y Geer

Identification of troponin I and actin, alpha cardiac muscle 1 as potential biomarkers for hearts of electrically stimulated chickens

Azura Amid, Norshahida A Samah, Faridah Yusof

A proteome map of primary cultured rat Schwann cells

Mi Shen, Yuhua Ji, Shuqiang Zhang, Haiyan Shi, Gang Chen, Xiaosong Gu, Fei Ding

Proteomic analysis of soybean defense response induced by cotton worm (prodenia litura, fabricius) feeding

Rui Fan, Hui Wang, Yongli Wang, Deyue Yu

A comparative proteomic study identified LRPPRC and MCM7 as putative actors in imatinib mesylate cross-resistance in Lucena cell line

Stephany Corrêa, Luciana Pizzatti, Bárbara Du Rocher, André Mencalha, Daniela Pinto, Eliana Abdelhay

Comparative proteomic analysis of early salt stress-responsive proteins in roots of SnRK2 transgenic rice

Myung Hee Nam, Sun Mi Huh, Kyung Mi Kim, Woong June Park, Jong Bok Seo, Kun Cho, Dool Yi Kim, Beom Gi Kim, In Sun Yoon

In-depth proteomic analysis of a mollusc shell: acid-soluble and acid-insoluble matrix of the limpet Lottia gigantea

Karlheinz Mann, Eric Edsinger-Gonzales, Matthias Mann

Development stage-specific proteomic profiling uncovers small, lineage specific proteins most abundant in the Aspergillus Fumigatus conidial proteome

Moo-Jin Suh, Natalie D. Fedorova, Steven E. Cagas, Susan Hastings, Robert D. Fleischmann, Scott N. Peterson, David S. Perlin, William C. Nierman, Rembert Pieper, Michelle Momany

Potential plasma biomarkers for progression of knee osteoarthritis using glycoproteomic analysis coupled with a 2D-LC-MALDI system

Isao Fukuda, Takeshi Ishihara, Shigeki Ohmachi, Ikue Sakikawa, Atsushi Morita, Minoru Ikeda, Shoji Yamane, Tomoko Toyosaki-Maeda, Yoshihiko Takinami, Hiroyuki Okamoto, Yoshito Numata, Naoshi Fukui

An efficient procedure for protein extraction from formalin-fixed, paraffin-embedded tissues for reverse phase protein arrays

Guo Huifang,Liu Wenbin,Ju Zhenlin,Tamboli Pheroze

Sex differences in the response of the alveolar macrophage proteome to treatment with exogenous surfactant protein-A

Phelps David S,Umstead Todd M,Floros Joanna

A critical assessment of SELDI-TOF-MS for biomarker discovery in serum and tissue of patients with an ovarian mass

Wegdam Wouter,Moerland Perry D,Meijer Danielle,de Jong Shreyas M

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