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Microbial Informatics and Experimentation

ISSN Print: 2042-5783

ISSN Online:

Website: http://www.microbialinformaticsj.com

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An efficient rRNA removal method for RNA sequencing in GC-rich bacteria

Peano Clelia,Pietrelli Alessandro,Consolandi Clarissa,Rossi Elio

Bacterial phylogenetic tree construction based on genomic translation stop signals

Lijing Xu, Jimmy Kuo, Jung-Kang Liu, Tit-Yee Wong

Growth comparison of several Escherichia coli strains exposed to various concentrations of lactoferrin using linear spline regression

Jon Bohlin, Camilla Sekse, Eystein Skjerve, Gerd E Vegarud

Use of the University of Minnesota Biocatalysis/Biodegradation Database for study of microbial degradation

Lynda BM Ellis, Lawrence P Wackett

Metagenomics - a guide from sampling to data analysis

Torsten Thomas, Jack Gilbert, Folker Meyer

Linear normalised hash function for clustering gene sequences and identifying reference sequences from multiple sequence alignments

Manal Helal, Fanrong Kong, Sharon CA Chen, Fei Zhou, Dominic E Dwyer, John Potter, Vitali Sintchenko

Mycobacterium tuberculosis and Clostridium difficille interactomes: demonstration of rapid development of computational system for bacterial interactome prediction

Seshan Ananthasubramanian, Rahul Metri, Ankur Khetan, Aman Gupta, Adam Handen, Nagasuma Chandra, Madhavi Ganapathiraju

Bioinformatic identification of Mycobacterium tuberculosis proteins likely to target host cell mitochondria: virulence factors?

Moreno-Altamirano María Maximina Bertha,Paredes-González Iris Selene,Espitia Clara,Santiago-Maldonado Mauricio

Computational genomics-proteomics and Phylogeny analysis of twenty one mycobacterial genomes (Tuberculosis & non Tuberculosis strains)

Zakham Fathiah,Aouane Othmane,Ussery David,Benjouad Abdelaziz

Analysis of evolutionary patterns of genes in Campylobacter jejuni and C. coli

Snipen Lars,Wassenaar Trudy M,Altermann Eric,Olson Jonathan

Prediction of a novel RNA binding domain in crocodilepox Zimbabwe Gene 157

Nicole S Little, Taylor Quon, Chris Upton

Quantifying the effect of environment stability on the transcription factor repertoire of marine microbes

Ivaylo Kostadinov, Renzo Kottmann, Alban Ramette, Jost Waldmann, Pier Luigi Buttigieg, Frank Gl？ckner

Base-By-Base version 2: single nucleotide-level analysis of whole viral genome alignments

William Hillary, Song-Han Lin, Chris Upton

The importance of metagenomic surveys to microbial ecology: or why Darwin would have been a metagenomic scientist

Jack A Gilbert, Ronald O'Dor, Nicholas King, Timothy M Vogel

Where the bugs are: analyzing distributions of bacterial phyla by descriptor keyword search in the nucleotide database

Andrea Squartini

The zinc-ribbon domain of Helicobacter pylori HP0958: requirement for RpoN accumulation and possible roles of homologs in other bacteria

Lara E Pereira, Jennifer Tsang, Jan Mrázek, Timothy R Hoover

PerPlot & PerScan: tools for analysis of DNA curvature-related periodicity in genomic nucleotide sequences

Jan Mrázek, Tejas Chaudhari, Aryabrata Basu

Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset

Peter E Larsen, Frank R Collart, Dawn Field, Folker Meyer, Kevin P Keegan, Christopher S Henry, John McGrath, John Quinn, Jack A Gilbert

Large-scale experimental studies show unexpected amino acid effects on protein expression and solubility in vivo in E. coli

W Nicholson Price, Samuel K Handelman, John K Everett, Saichiu N Tong, Ana Bracic, Jon D Luff, Victor Naumov, Thomas Acton, Philip Manor, Rong Xiao, Burkhard Rost, Gaetano T Montelione, John F Hunt

Translational web robots for pathogen genome analysis

Vitali Sintchenko, Enrico W Coiera

Natural genetic engineering: intelligence & design in evolution?

David W Ussery

Stringent response of Escherichia coli: revisiting the bibliome using literature mining

Sónia Carneiro, Anália Louren？o, Eugénio C Ferreira, Isabel Rocha

The Regulatory Network of Pseudomonas aeruginosa

Edgardo Galán-Vásquez, Beatriz Luna, Agustino Martínez-Antonio

Welcome to Microbial Informatics and Experimentation

Michael J Wise, Barry L Wanner

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