Comparative and Functional Genomics - oalib

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Comparative and Functional Genomics

ISSN Print: 0749-503X

ISSN Online:

主页: http://www.hindawi.com/journals/cfg/

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Xenogenomics: Genomic Bioprospecting in Indigenous and Exotic Plants Through EST Discovery, cDNA Microarray-Based Expression Profiling and Functional Genomics

Ulrik P. John,German C. Spangenberg

Ontology-Based Interactive Information Extraction From Scientific Abstracts

David Milward,Marcus Bj reland,William Hayes,Michelle Maxwell,Lisa berg,Nick Tilford,James Thomas,Roger Hale,Sylvia Knight,Julie Barnes

Genomic Analyses of Transport Proteins in Ralstonia metallidurans

Torsten von Rozycki,Dietrich H. Nies,Milton H. Saier Jr.

In Silico Analysis for Transcription Factors With Binuclear Cluster DNA-Binding Domains in Candida albicans

Sergi Maicas,Inmaculada Moreno,Almudena Nieto,Micaela Gómez,Rafael Sentandreu,Eulogio Valentín

On Carcinomas and Other Pathological Entities

Barry Smith,Anand Kumar,Werner Ceusters,Cornelius Rosse

Towards Inference of a Biochemical Ontology From a Metabolic Database

D. C. McShan

Effect of Stress on Viral–Bacterial Synergy in Bovine Respiratory Disease: Novel Mechanisms to Regulate Inflammation

P. D. Hodgson,P. Aich,A. Manuja,K. Hokamp,F. M. Roche,F. S. L. Brinkman,A. Potter,L. A. Babiuk,P. J. Griebel

The Korea Brassica Genome Project: a Glimpse of the Brassica Genome Based on Comparative Genome Analysis With Arabidopsis

Tae-Jin Yang,Jung-Sun Kim,Ki-Byung Lim,Soo-Jin Kwon,Jin-A Kim,Mina Jin,Jee Young Park,Myung-Ho Lim,Ho-Il Kim,Seog Hyung Kim,Yong Pyo Lim,Beom-Seok Park

Reassessing Design and Analysis of two-Colour Microarray Experiments Using Mixed Effects Models

Guilherme J. M. Rosa,Juan P. Steibel,Robert J. Tempelman

Identification and Comparative Analysis of the Peptidyl-Prolyl cis/trans Isomerase Repertoires of H. sapiens, D. melanogaster, C. elegans, S. cerevisiae and Sz. pombe

Trevor J. Pemberton,John E. Kay

The Montagues and the Capulets

Carole Goble,Chris Wroe

Navigating Public Microarray Databases

Christopher J. Penkett,Jürg B hler

The Seventh Annual Bio-Ontologies Meeting Moat House Hotel, Glasgow, 30 July 2004

Phillip Lord,Robert Stevens

Genome-Wide Analysis of the Effects of Heat Shock on a Saccharomyces cerevisiae Mutant With a Constitutively Activated cAMP-Dependent Pathway

Dawn L. Jones,June Petty,David C. Hoyle,Andrew Hayes,Stephen G. Oliver,Isabel Riba-Garcia,Simon J. Gaskell,Lubomira Stateva

The ESF Programme on Functional Genomics Workshop on ‘Data Integration in Functional Genomics: Application to Biological Pathways’

Pierre-Alain Binz,Henning Hermjakob,Paul van der Vet

Ontology for Genome Comparison and Genomic Rearrangements

Keith Flanagan,Robert Stevens,Matthew Pocock,Pete Lee,Anil Wipat

Mapping the Gene Ontology Into the Unified Medical Language System

Jane Lomax,Alexa T. McCray

RNAi for Plant Functional Genomics

Louisa Matthew

Design, Implementation and Maintenance of a Model Organism Database for Arabidopsis thaliana

Danforth Weems,Neil Miller,Margarita Garcia-Hernandez,Eva Huala,Seung Y. Rhee

Meeting Report: The Institute for Genomic Research/Wellcome Trust Conference: Genomes 2004 14–17 April 2004, the Wellcome Trust Conference Centre, The Wellcome Trust Genome Campus, Hinxton, Cambridge, Uk

Jo Wixon

Sequence Ontology Annotation Guide

Karen Eilbeck,Suzanna E. Lewis

A Formal Language-Based Approach in Biology

Marian Gheorghe,Victor Mitrana

Signal Analysis on Strings for Immune-Type Pattern Recognition

Nikolaos D. Atreas,Costas Karanikas,Persefoni Polychronidou

A Comparison of Global Gene Expression Measurement Technologies in Arabidopsis thaliana

Sean J. Coughlan,Vikas Agrawal,Blake Meyers

From Databases to Modelling of Functional Pathways

Sergio Nasi

Creating Porcine Biomedical Models Through Recombineering

Margarita M. Rogatcheva,Laurie A. Rund,Kelly S. Swanson,Brandy M. Marron,Jonathan E. Beever,Christopher M. Counter,Lawrence B. Schook

Solanaceae—A Model for Linking Genomics with Biodiversity

Sandra Knapp,Lynn Bohs,Michael Nee,David M. Spooner

Comparative Genomic Assessment of Novel Broad-Spectrum Targets for Antibacterial Drugs

Thomas A. White,Douglas B. Kell

New Computational Tools for Brassica Genome Research

Christopher G. Love,Jacqueline Batley,Geraldine Lim,Andrew J. Robinson,David Savage,Daniel Singh,German C. Spangenberg,David Edwards

Investigation Into the use of C- and N-terminal GFP Fusion Proteins for Subcellular Localization Studies Using Reverse Transfection Microarrays

Ella Palmer,Tom Freeman

Rewriting Systems and the Modelling of Biological Systems

Jean-Louis Giavitto,Grant Malcolm,Olivier Michel

ProbSeq—A Fragmentation Model for Interpretation of Electrospray Tandem Mass Spectrometry Data

John Skilling,Richard Denny,Keith Richardson,Phillip Young,Thérèse McKenna,Iain Campuzano,Mark Ritchie

Identification and Analysis of Novel Tandem Repeats in the Cell Surface Proteins of Archaeal and Bacterial Genomes Using Computational Tools

S. Adindla,K. K. Inampudi,K. Guruprasad,L. Guruprasad

Enabling Proteomics: The Need for an Extendable ‘Workbench’ for User-Configurable Solutions

Robert J. Beynon

ArraySolver: An Algorithm for Colour-Coded Graphical Display and Wilcoxon Signed-Rank Statistics for Comparing Microarray Gene Expression Data

Haseeb Ahmad Khan

Interactome Data and Databases: Different Types of Protein Interaction

Javier De Las Rivas,Alberto de Luis

MicroCore: Mapping Genome Expression to Cell Pathways and Networks

Manish Patel,Sylvia Nagl

Computational Aspects of Protein Functionality

R. C. Paton,C.-H. Toh

Som-Based Class Discovery Exploring the ICA-Reduced Features of Microarray Expression Profiles

Andrei Dragomir,Seferina Mavroudi,Anastasios Bezerianos

A Case Study on Choosing Normalization Methods and Test Statistics for Two-Channel Microarray Data

Yang Xie,Kyeong S. Jeong,Wei Pan,Arkady Khodursky,Bradley P. Carlin

Shaping Biological Knowledge: Applications in Proteomics

F. Lisacek,C. Chichester,P. Gonnet,O. Jaillet,S. Kappus,F. Nikitin,P. Roland,G. Rossier,L. Truong,R. Appel

Interoperability of CABRI Services and Biochemical Pathways Databases

Paolo Romano,Ottavia Aresu,Maria Assunta Manniello,Barbara Parodi

UTOPIA—User-Friendly Tools for Operating Informatics Applications

S. R. Pettifer,J. R. Sinnott,T. K. Attwood

Classification of Chemical Compounds to Support Complex Queries in a Pathway Database

Ulrike Wittig,Andreas Weidemann,Renate Kania,Christian Peiss,Isabel Rojas

Three Novel Pigmentation Mutants Generated by Genome-Wide Random ENU Mutagenesis in the Mouse

Vicky Tsipouri,John A. Curtin,Pat M. Nolan,Lucie Vizor,Claire A. Parsons,Colin M. Clapham,Ian D. Latham,Lesley J. Rooke,Jo E. Martin,Jo Peters,A. Jackie Hunter,Derek Rogers,Sohaila Rastan,Steve D.M. Brown,Elizabeth M.C. Fisher,Nigel K. Spurr,Ian C. Gray

Shotgun Cloning of Transposon Insertions in the Genome of Caenorhabditis elegans

Alexander M. van der Linden,Ronald H. A. Plasterk

Individual-Based Modelling of Bacterial Ecologies and Evolution

C. Vlachos,R. Gregory,R. C. Paton,J. R. Saunders,Q. H. Wu

The Evolution of Protein Interaction Networks in Regulatory Proteins

Gregory D. Amoutzias,David L. Robertson,Erich Bornberg-Bauer

A Survey of Nucleotide Cyclases in Actinobacteria: Unique Domain Organization and Expansion of the Class III Cyclase Family in Mycobacterium tuberculosis

Avinash R. Shenoy,K. Sivakumar,A. Krupa,N. Srinivasan,Sandhya S. Visweswariah

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