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OALib Journal期刊
ISSN: 2333-9721
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主页: https://journals.plos.org/ploscompbiol/

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Comparative Genome-Scale Reconstruction of Gapless Metabolic Networks for Present and Ancestral Species

Esa Pitk？nen,Jana Kludas,Jian Hou,Juho Rousu,Liisa Holm,Merja Oja,Merja Penttil？,Mikko Arvas,Muhammad Fahad Syed,Paula Jouhten,Peter Blomberg

Compact Modeling of Allosteric Multisite Proteins: Application to a Cell Size Checkpoint

Arturo Vargas,Douglas R. Kellogg,Germán Enciso

Fast Protein Loop Sampling and Structure Prediction Using Distance-Guided Sequential Chain-Growth Monte Carlo Method

Jie Liang,Jinfeng Zhang,Ke Tang

Modelling Individual Differences in the Form of Pavlovian Conditioned Approach Responses: A Dual Learning Systems Approach with Factored Representations

Florian Lesaint,Mehdi Khamassi,Olivier Sigaud,Shelly B. Flagel,Terry E. Robinson

Correction: Long Non-Coding RNA and Alternative Splicing Modulations in Parkinson’s Leukocytes Identified by RNA Sequencing

The PLOS Computational Biology Staff

Ecological Consistency of SSU rRNA-Based Operational Taxonomic Units at a Global Scale

Christian von Mering,Jo？o F. Matias Rodrigues,Thomas S. B. Schmidt

Inferring on the Intentions of Others by Hierarchical Bayesian Learning

Andreea O. Diaconescu,Christoph Mathys,Ekaterina I. Lomakina,Ernst Fehr,Jean Daunizeau,Klaas E. Stephan,Lars Kasper,Lilian A. E. Weber

Paving the Way Towards a Successful and Fulfilling Career in Computational Biology

Geoff Macintyre,Marion Adebiyi,Olugbenga Oluwagbemi,Segun Fatumo

Combining Experiments and Simulations Using the Maximum Entropy Principle

Jesper Ferkinghoff-Borg,Kresten Lindorff-Larsen,Wouter Boomsma

NESmapper: Accurate Prediction of Leucine-Rich Nuclear Export Signals Using Activity-Based Profiles

Hiroshi Yanagawa,Ryohei Terauchi,Satoshi Tabata,Shunichi Kosugi

Computational Prediction of Alanine Scanning and Ligand Binding Energetics in G-Protein Coupled Receptors

Hugo Gutiérrez-de-Terán,Johan ？qvist,Lars Boukharta

Principal Component Analysis Characterizes Shared Pathogenetics from Genome-Wide Association Studies

Alon Keinan,Diana Chang

Coupling of Lever Arm Swing and Biased Brownian Motion in Actomyosin

Akio Togashi,Masaki Sasai,Mitsunori Takano,Qing-Miao Nie,Takeshi N. Sasaki,Tomoki P. Terada

Seasonally Dependent Relationships between Indicators of Malaria Transmission and Disease Provided by Mathematical Model Simulations

Erin M. Stuckey,Nakul Chitnis,Thomas Smith

Baseline CD4+ T Cell Counts Correlates with HIV-1 Synonymous Rate in HLA-B*5701 Subjects with Different Risk of Disease Progression

Annika C. Karlsoon,Frederick M. Hecht,Jennifer Cook,Marco Salemi,Mattia C. F. Proper,Melissa M. Norstr？m,Nazle M. Veras,Wei Huang,Wendy Hartogensis

Linear Motif-Mediated Interactions Have Contributed to the Evolution of Modularity in Complex Protein Interaction Networks

Heetak Lee,Inhae Kim,Sanguk Kim,Seong Kyu Han

An Innovative Influenza Vaccination Policy: Targeting Last Season's Patients

Alison P. Galvani,Arieh Gavious,Dan Yamin,Eyal Solnik,Joseph S. Pliskin,Nadav Davidovitch,Ran D. Balicer

Investigating the Structure and Dynamics of the PIK3CA Wild-Type and H1047R Oncogenic Mutant

Bogos Agianian,Maria Pavlaki,Paraskevi Gkeka,Savvas Christoforidis,Thomas Evangelidis,Vasiliki Lazani,Zoe Cournia

Likelihood-Based Gene Annotations for Gap Filling and Quality Assessment in Genome-Scale Metabolic Models

Christopher S. Henry,Matthew N. Benedict,Michael B. Mundy,Nathan D. Price,Nicholas Chia

Speed Controls in Translating Secretory Proteins in Eukaryotes - an Evolutionary Perspective

Michal Linial,Shelly Mahlab

The Making of the Women in Biology Forum (WiB) at Bioclues

Dhatri Madduru,Mohanalatha Chandrasekharan,Pranathi Pappu,Reeta Rani Singhania,Renuka Suravajhala,Sameera Panchangam

Spatial Generalization in Operant Learning: Lessons from Professional Basketball

Tal Neiman,Yonatan Loewenstein

Evolution of Pathogen Specialisation in a Host Metapopulation: Joint Effects of Host and Pathogen Dispersal

Christian Lannou,Jeremy J. Burdon,Julien Papa？x,Peter H. Thrall

Ten Simple Rules for Writing Research Papers

Weixiong Zhang

Escherichia coli Peptidoglycan Structure and Mechanics as Predicted by Atomic-Scale Simulations

Beno？t Roux,Grant J. Jensen,James C. Gumbart,Morgan Beeby

Barriers to Cooperation Aid Ideological Rigidity and Threaten Societal Collapse

Marko Jusup,Tadasu Matsuo,Yoh Iwasa

In Silico Screening of the Key Cellular Remodeling Targets in Chronic Atrial Fibrillation

Gunnar Seemann,Jussi T. Koivum？ki,Mary M. Maleckar,Pasi Tavi

k-OptForce: Integrating Kinetics with Flux Balance Analysis for Strain Design

Ali R. Zomorrodi,Anupam Chowdhury,Costas D. Maranas

Synonymous Constraint Elements Show a Tendency to Encode Intrinsically Disordered Protein Segments

Mauricio Macossay-Castillo,Peter Tompa,Rita Pancsa,Simone Kosol

Exploring the miRNA Regulatory Network Using Evolutionary Correlations

Benedikt Obermayer,Erel Levine

Evidence of Conformational Selection Driving the Formation of Ligand Binding Sites in Protein-Protein Interfaces

Dima Kozakov,Sandor Vajda,Tanggis Bohnuud

Confidence Sharing: An Economic Strategy for Efficient Information Flows in Animal Groups

Amos Korman,Efrat Greenwald,Ofer Feinerman

In Silico Single-Molecule Manipulation of DNA with Rigid Body Dynamics

Jean-Marc Victor,Maria Barbi,Pascal Carrivain

A Unified Model of Heading and Path Perception in Primate MSTd

N. Andrew Browning,Oliver W. Layton

Allele-Specific Network Reveals Combinatorial Interaction That Transcends Small Effects in Psoriasis GWAS

Alan R. Templeton,Sharlee Climer,Weixiong Zhang

Quantifying the Impact and Extent of Undocumented Biomedical Synonymy

Andrey Rzhetsky,David R. Blair,James A. Evans,Kanix Wang,Svetlozar Nestorov

Correction: Structure-Based Druggability Assessment of the Mammalian Structural Proteome with Inclusion of Light Protein Flexibility

The PLOS Computational Biology Staff

Establishing and Managing a Global Student Network

Avinash Shanmugam,Geoff Macintyre

A Reappraisal of How to Build Modular, Reusable Models of Biological Systems

Brian E. Carlson,Christopher T. Thompson,Daniel L. Cook,Herbert M. Sauro,John H. Gennari,Lucian P. Smith,Maxwell L. Neal,Michael T. Cooling

Mathematical Model of a Telomerase Transcriptional Regulatory Network Developed by Cell-Based Screening: Analysis of Inhibitor Effects and Telomerase Expression Mechanisms

Alan E. Bilsland,Claire J. Cairney,Jon Roffey,Katrina Stevenson,Stacey Hoare,W. Nicol Keith,Yu Liu

Computational Design of the Affinity and Specificity of a Therapeutic T Cell Receptor

Brian G. Pierce,Brian M. Baker,Craig W. Vander Kooi,Lance M. Hellman,Moushumi Hossain,Nishant K. Singh,Zhiping Weng

A Computational Model for the Analysis of Lipoprotein Distributions in the Mouse: Translating FPLC Profiles to Lipoprotein Metabolism

Albert K. Groen,Christian A. Tiemann,Fianne L. P. Sips,Maaike H. Oosterveer,Natal A. W. van Riel,Peter A. J. Hilbers

Slow Feature Analysis on Retinal Waves Leads to V1 Complex Cells

Laurenz Wiskott,Niko Wilbert,Sven D？hne

Effects of Specular Highlights on Perceived Surface Convexity

James H. Elder,Wendy J. Adams

Modeling of the Dorsal Gradient across Species Reveals Interaction between Embryo Morphology and Toll Signaling Pathway during Evolution

Claudia Mieko Mizutani,Hannah R. Koslen,Hillel J. Chiel,Juan Sebastian Chahda,Priscilla Ambrosi

An Integrated Model of Multiple-Condition ChIP-Seq Data Reveals Predeterminants of Cdx2 Binding

Akshay Kakumanu,Carolyn A. Morrison,David K. Gifford,Esteban O. Mazzoni,Hynek Wichterle,Matthew D. Edwards,Richard I. Sherwood,Shaun Mahony

STDP Installs in Winner-Take-All Circuits an Online Approximation to Hidden Markov Model Learning

Bernhard Nessler,David Kappel,Wolfgang Maass

Comparative Analysis of the Macroscale Structural Connectivity in the Macaque and Human Brain

Alard Roebroeck,Alexandros Goulas,Gleb Bezgin,Harry B. M. Uylings,Matteo Bastiani,Peter Stiers

Dissecting Dynamic Genetic Variation That Controls Temporal Gene Response in Yeast

Avital Brodt,Eyal David,Irit Gat-Viks,Maya Botzman

Exploring O2 Diffusion in A-Type Cytochrome c Oxidases: Molecular Dynamics Simulations Uncover Two Alternative Channels towards the Binuclear Site

A. Sofia F. Oliveira,António M. Baptista,Cláudio M. Soares,Jo？o M. Damas

©2008-2020 OALib, Inc | Public user content licensed CC-BY 4.0 unless otherwise specified. OALib ISSN Online: 2333-9721 OALib ISSN Print: 2333-9705