Reservoir computing model of prefrontal cortex creates novel combinations of previous navigation sequences from hippocampal place-cell replay with spatial reward propagation

Alfredo Weitzenfeld,Bruce Harland,Jean-Marc Fellous,Martin Llofriu Alonso,Nicolas Cazin,Pablo Scleidorovich Chiodi,Peter Ford Dominey,Tatiana Pelc

Correction: Infectious reactivation of cytomegalovirus explaining age- and sex-specific patterns of seroprevalence

Correction: From Inverse Problems in Mathematical Physiology to Quantitative Differential Diagnoses

Correction: A dynamic genetic-hormonal regulatory network model explains multiple cellular behaviors of the root apical meristem of Arabidopsis thaliana

Correction: Atrial arrhythmogenicity of KCNJ2 mutations in short QT syndrome: Insights from virtual human atria

Machine and deep learning meet genome-scale metabolic modeling

Claudio Angione,Elisabeth Yaneske,Guido Zampieri,Supreeta Vijayakumar

Dimensionality in recurrent spiking networks: Global trends in activity and local origins in connectivity

Eric Shea-Brown,Gabriel Koch Ocker,Michael A. Buice,Stefano Recanatesi

Think: Theory for Africa

Alexander D. Antrobus,Christopher B. Currin,Joseph V. Raimondo,Peter E. Latham,Phumlani N. Khoza,Tim P. Vogels

Ten simple rules for giving an effective academic job talk

Ana C. R. Gomez,Annabel C. Beichman,C. Eduardo Guerra Amorim,Gaurav S. Kandlikar,James O. Lloyd-Smith,Jazlyn Mooney,Julie S. Miller,Kirk E. Lohmueller,Lauren L. Smith,Mark Juhn,Monique R. Ambrose,Riley O. Mummah,Shayna A. Sura

Correction: Effects of Darwinian Selection and Mutability on Rate of Broadly Neutralizing Antibody Evolution during HIV-1 Infection

Correction: The Equivalence of Information-Theoretic and Likelihood-Based Methods for Neural Dimensionality Reduction

Correction: Reconstructible Phylogenetic Networks: Do Not Distinguish the Indistinguishable

Recombinant vector vaccine evolution

James J. Bull,Rustom Antia,Scott L. Nuismer

Assessment of the cardiovascular adverse effects of drug-drug interactions through a combined analysis of spontaneous reports and predicted drug-target interactions

Alexey Lagunin,Dmitry Filimonov,Sergey Ivanov,Vladimir Poroikov

Modelling the mechanics of exploration in larval Drosophila

Barbara Webb,Jane Loveless,Konstantinos Lagogiannis

Robustness of respiratory rhythm generation across dynamic regimes

Jeffrey C. Smith,Jonathan E. Rubin

From skylight input to behavioural output: A computational model of the insect polarised light compass

Barbara Webb,Benjamin Risse,Evripidis Gkanias,Michael Mangan

Per-sample immunoglobulin germline inference from B cell receptor deep sequencing data

Duncan K. Ralph,Frederick A. Matsen, IV

ACAP1 assembles into an unusual protein lattice for membrane deformation through multiple stages

Chun Chan,Daohui Zhao,Fei Sun,Jian Li,Jian Zhou,Jun Fan,Lanyuan Lu,Shengjiang Yang,Tongxin Niu,Victor W. Hsu,Xiaoyun Pang,Yan Zhang

Modeling the daily rhythm of human pain processing in the dorsal horn

Jennifer Crodelle,Megan Hastings Hagenauer,Sofia H. Piltz,Victoria Booth

Foraging as an evidence accumulation process

Ahmed El Hady,Jacob D. Davidson

Propagation of orientation selectivity in a spiking network model of layered primary visual cortex

Benjamin Merkt,Friedrich Schü？ler,Stefan Rotter

Frontal cortex tracks surprise separately for different sensory modalities but engages a common inhibitory control mechanism

David E. Huber,Jan R. Wessel

Heterogeneous susceptibility to rotavirus infection and gastroenteritis in two birth cohort studies: Parameter estimation and epidemiological implications

Aisleen Bennett,Benjamin A. Lopman,Gagandeep Kang,Guillermo Ruiz-Palacios,Joseph A. Lewnard,M. Lourdes Guerrero,Naor Bar-Zeev,Nigel A. Cunliffe,Prasanna Samuel,Umesh D. Parashar,Virginia E. Pitzer

Modeling human intuitions about liquid flow with particle-based simulation

Christopher J. Bates,Ilker Yildirim,Joshua B. Tenenbaum,Peter Battaglia

Ensemble of decision tree reveals potential miRNA-disease associations

Chi-Chi Zhu,Jun Yin,Xing Chen

A case study in the functional consequences of scaling the sizes of realistic cortical models

Lai-Sang Young,Logan Chariker,Madhura R. Joglekar,Robert Shapley

Why do eukaryotic proteins contain more intrinsically disordered regions?

Arne Elofsson,Claudio Bassot,Marco Salvatore,Walter Basile

Biophysics and population size constrains speciation in an evolutionary model of developmental system drift

Bhavin S. Khatri,Richard A. Goldstein

Identifying important parameters in the inflammatory process with a mathematical model of immune cell influx and macrophage polarization

Angela M. Reynolds,Jing Wang,Marcella Torres,Paul J. Yannie,Rebecca A. Segal,Shobha Ghosh

The invasion of de-differentiating cancer cells into hierarchical tissues

Arne Traulsen,Da Zhou,David Dingli,Yue Luo

Remarkable structural transformations of actin bundles are driven by their initial polarity, motor activity, crosslinking, and filament treadmilling

Aravind Chandrasekaran,Arpita Upadhyaya,Garegin A. Papoian

Correction: Temporal Gillespie algorithm: Fast simulation of contagion processes on time-varying networks

A model for the origin and development of visual orientation selectivity

Alan W. Freeman,Gratia Nguyen

β-Methylamino-L-alanine substitution of serine in SOD1 suggests a direct role in ALS etiology

David D. Mowrey,Elizabeth A. Proctor,Nikolay V. Dokholyan

A computational framework for the morpho-elastic development of molluskan shells by surface and volume growth

Alain Goriely,Derek E. Moulton,Krishna Garikipati,Régis Chirat,Shiva Rudraraju

Bayesian hypothesis testing and experimental design for two-photon imaging data

Katrin Franke,Luke E. Rogerson,Philipp Berens,Thomas Euler,Zhijian Zhao

Energy-efficient information transfer at thalamocortical synapses

David Attwell,Elisabeth Engl,Julia Jade Harris,Renaud Blaise Jolivet

Connecting signaling and metabolic pathways in EGF receptor-mediated oncogenesis of glioblastoma

Arup K. Bag,Chhabinath Mandal,Chitra Mandal,Krishna Kumar,Peter Walden,Saikat Chakrabarti,Sapan Mandloi,Saulius Jarmalavicius,Susmita Mondal

Bayesian phylodynamics of avian influenza A virus H9N2 in Asia with time-dependent predictors of migration

Alexei J. Drummond,Bing Xu,Jing Yang,Nicola F. Müller,Remco Bouckaert

Every which way? On predicting tumor evolution using cancer progression models

Claudia Vasallo,Ramon Diaz-Uriarte

On the optimal design of metabolic RNA labeling experiments

Alexey Uvarovskii,Christoph Dieterich,Isabel S. Naarmann-de Vries

FAMoS: A Flexible and dynamic Algorithm for Model Selection to analyse complex systems dynamics

Andrea Imle,Frederik Graw,Michael Gabel,Oliver T. Fackler,Tobias Hohl

ProtFus: A Comprehensive Method Characterizing Protein-Protein Interactions of Fusion Proteins

Alessandro Gorohovski,Lars Juhl Jensen,Milana Frenkel-Morgenstern,Somnath Tagore

Pulse transit time estimation of aortic pulse wave velocity and blood pressure using machine learning and simulated training data

Harri Lindholm,Janne M. J. Huttunen,Leo K？rkk？inen

Arrhythmia mechanisms and spontaneous calcium release: Bi-directional coupling between re-entrant and focal excitation

Michael A. Colman

Variation in plastic responses to light results from selection in different competitive environments—A game theoretical approach using virtual plants

Franca J. Bongers,Jacob C. Douma,Jochem B. Evers,Niels P. R. Anten,Ronald Pierik,Yoh Iwasa

Reappraising the utility of Google Flu Trends

Jeffrey Shaman,Sasikiran Kandula

Machine learning-based microarray analyses indicate low-expression genes might collectively influence PAH disease

James West,Jiangping Bai,Qiang Wu,Song Cui

Reduced model to predict thrombin and fibrin during thrombosis on collagen/tissue factor under venous flow: Roles of γ’-fibrin and factor XIa

Jason Chen,Scott L. Diamond