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Quantitative Biology

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主页: http://arxiv.org/archive/q-bio

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50/500 or 100/1000 debate is not about the time frame - Reply to Rosenfeld

Richard Frankham,Corey J. A. Bradshaw,Barry W. Brook

A generalized neutral theory explains static and dynamic properties of biotic communities

Michael Kalyuzhny,Ronen Kadmon,Nadav M. Shnerb

Planning horizons and end conditions for sustained yield studies in continuous cover forests

Jerome K. Vanclay

The statistical machinery of alien species

Michael G Bowler,Colleen K Kelly

Optimal Lévy-flight foraging in a finite landscape

Kun Zhao,Raja Jurdak,Jiajun Liu,David Westcott,Branislav Kusy,Hazel Parry,Philipp Sommer,Adam McKeown

Rational Design of Antibiotic Treatment Plans

Portia M. Mira,Kristina Crona,Devin Greene,Juan C. Meza,Bernd Sturmfels,Miriam Barlow

Competition and evolution in restricted space

Fabricio L. Forgerini,Nuno Crokidakis

Onset of collective motion in locusts is captured by a minimal model

Louise Dyson*,Christian A. Yates*,Jerome Buhl,Alan J. McKane *These authors contributed equally to this work

Fixation in finite populations evolving in fluctuating environments

Peter Ashcroft,Philipp M Altrock,Tobias Galla

Asymptotic behavior of spatially distributed replicator systems

Alexander S. Bratus,Artem S. Novozhilov,Vladimir P. Posvyanskii

Characterizing the Interaction Between DNA and GelRed Fluorescent Stain

F. A. P. Crisafuli,E. B. Ramos,M. S. Rocha

Giant Viruses of the Kutch Desert

Csaba Kerepesi,Vince Grolmusz

Synonymous and Nonsynonymous Distances Help Untangle Convergent Evolution and Recombination

Peter B. Chi,Sujay Chattopadhyay,Philippe Lemey,Evgeni V. Sokurenko,Vladimir N. Minin

Theoretical modelling discriminates the stochastic and deterministic hypothesis of cell reprogramming

Jiawei Yan,Pu Zheng,Xingjie Pan

Soft bounds on diffusion produce skewed distributions and Gompertz growth

Salvatore Mandrà,Marco Cosentino Lagomarsino,Marco Gherardi

Why Blind-Variation Selective-Retention is an Inappropriate Explanatory Framework for Creativity

Liane Gabora

Dynamics of Random Neural Networks with Bistable Units

Merav Stern,Haim Sompolinsky,L. F. Abbott

Collapse of an ecological network in Ancient Egypt

Justin D. Yeakel,Mathias M. Pires,Lars Rudolf,Nathaniel J. Dominy,Paul L. Koch,Paulo R. Guimar？es Jr.,Thilo Gross

Evolutionary food web model based on body masses gives realistic networks with permanent species turnover

Korinna T. Allhoff,Daniel Ritterskamp,Bj？rn C. Rall,Barbara Drossel,Christian Guill

Growth patterns and scaling laws governing AIDS epidemic in Brazilian cities

F. J. Antonio,S. Picoli Jr,J. J. V. Teixeira,R. S. Mendes

Modeling the Impact of Interventions on an Epidemic of Ebola in Sierra Leone and Liberia

Caitlin M. Rivers,Eric T. Lofgren,Madhav Marathe,Stephen Eubank,Bryan L. Lewis

Reflections on the extinction-explosion dichotomy

Mike Steel

Does mutualism hinder biodiversity?

Alberto Pascual-García,Antonio Ferrera,Ugo Bastolla

Rate and cost of adaptation in the Drosophila Genome

Stephan Schiffels,Michael L？ssig,Ville Mustonen

An adaptive multi-level simulation algorithm for stochastic biological systems

Christopher Lester,Christian A. Yates,Michael B. Giles,Ruth E. Baker

Approximate discrete dynamics of EMG signal

Sayan Mukherjee,Sanjay Kumar Palit,D. K. Bhattacharya

A Two-Part Mixed-Effects Modeling Framework For Analyzing Whole-Brain Network Data

Sean L. Simpson,Paul J. Laurienti

Effects of macromolecular crowding on the collapse of biopolymers

Hongsuk Kang,Philip A. Pincus,Changbong Hyeon,D. Thirumalai

Beyond the E-value: stratified statistics for protein domain prediction

Alejandro Ochoa,John D. Storey,Manuel Llinás,Mona Singh

A coarse-grained model with implicit salt for RNAs: predicting 3D structure, stability and salt effect

Ya-Zhou Shi,Feng-Hua Wang,Yuan-Yan Wu,Zhi-Jie Tan

Analysis of heat kernel highlights the strongly modular and heat-preserving structure of proteins

Lorenzo Livi,Enrico Maiorino,Andrea Pinna,Alireza Sadeghian,Antonello Rizzi,Alessandro Giuliani

Conformational selection in protein binding and function

Thomas R. Weikl,Fabian Paul

Role of the host genetic variability in the influenza-A virus susceptibility; a review

Ana Carolina Arcanjo,Giovanni Mazzocco,Silviene Fabiana de Oliveira,Dariusz Plewczynski,Jan P. Radomski

Reactive Strategies: The Establishment of Cooperation

Elton J. S. Júnior,Lucas Wardil,Jafferson K. L. da Silva

The diversity of evolutionary dynamics on epistatic versus non-epistatic fitness landscapes

David M. McCandlish,Jakub Otwinowski,Joshua B. Plotkin

Mutant number distribution in an exponentially growing population

Peter Keller,Tibor Antal

Tying Up Loose Strands: Defining Equations of the Strand Symmetric Model

Colby Long,Seth Sullivant

Exact reconciliation of undated trees

Leo van Iersel,Celine Scornavacca,Steven Kelk

A process-independent explanation for the general form of Taylor's Law

Xiao Xiao,Kenneth J. Locey,Ethan P. White

Survival under high mutation rates

Rinaldo B. Schinazi

Ebola cases and health system demand in Liberia

John M. Drake,RajReni B. Kaul,Laura Alexander,Suzanne M. O'Regan,Andrew M. Kramer,J. Tomlin Pulliam,Matthew J. Ferrari,Andrew W. Park

Impacts of terraces on phylogenetic inference

Michael J Sanderson,Michelle M. McMahon,Alexandros Stamatakis,Derrick J. Zwickl,Mike Steel

Neural Population Coding of Multiple Stimuli

A. Emin Orhan,Wei Ji Ma

Bayesian synaptic plasticity makes predictions about plasticity experiments in vivo

Laurence Aitchison,Peter E. Latham

Identifying features in spike trains using binless similarity measures

Shubhanshu Shekhar,Kaushik Majumdar

Efficient transmission of subthreshold signals in complex networks of spiking neurons

Joaquin J. Torres,Irene Elices,J. Marro

Selectivity filter gate versus voltage-sensitive gate: A study of quantum probabilities in the Hodgkin-Huxley equation

Narges Moradi,Felix Scholkmann,Vahid Salari

Probabilistic inference in discrete spaces can be implemented into networks of LIF neurons

Dimitri Probst,Mihai A. Petrovici,Ilja Bytschok,Johannes Bill,Dejan Pecevski,Johannes Schemmel,Karlheinz Meier

Demixed principal component analysis of population activity in higher cortical areas reveals independent representation of task parameters

Dmitry Kobak,Wieland Brendel,Christos Constantinidis,Claudia E. Feierstein,Adam Kepecs,Zachary F. Mainen,Ranulfo Romo,Xue-Lian Qi,Naoshige Uchida,Christian K. Machens

A Unified Framework for Information Coding: Oscillations, Memory, and Zombie Modes

Andrew T. Sornborger,Louis Tao

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