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ISSN: 2333-9721
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Quantitative Biology

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主页: http://arxiv.org/archive/q-bio

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Computational Study of Molecular Mechanisms of Caffeine Actions

V. I. Poltev,E. Rodriguez,T. I. Grokhlina,A. V. Teplukhin,A. Deriabina,E. Gonzalez

Analytic and Numerical Models of Oxygen and Nutrient Diffusion, Metabolism Dynamics, and Architecture Optimization in Three-Dimensional Tissue Constructs with Applications and Insights in Cerebral Organoids

Richard J. McMurtrey

A discrete in continuous mathematical model of cardiac progenitor cells formation and growth as spheroid clusters (Cardiospheres)

Ezio Di Costanzo,Alessandro Giacomello,Elisa Messina,Roberto Natalini,Giuseppe Pontrelli,Fabrizio Rossi,Robert Smits,Monika Twarogowska

Mass Action Dynamics of Coupled Reactions using Fluctuation Theory

William R. Cannon,Scott E. Baker

Phase transition in the sample complexity of likelihood-based phylogeny inference

Sebastien Roch,Allan Sly

Eigenfunctions and the Dirichlet problem for the Classical Kimura Diffusion Operator

Charles L. Epstein,Jon Wilkening

Identification of drug resistance mutations in HIV from constraints on natural evolution

Thomas C. Butler,John P. Barton,Mehran Kardar,Arup K. Chakraborty

Mathematical Modeling of Dengue Epidemic: Control Methods and Vaccination Strategies

Sylvestre Aureliano Carvalho,Stella Olívia da Silva,Iraziet da Cunha Charret

Path statistics, memory, and coarse-graining of continuous-time random walks on networks

Michael Manhart,Willow Kion-Crosby,Alexandre V. Morozov

Fronts and fluctuations at a critical surface

Haim Weissmann,Nadav M. Shnerb,David A. Kessler

Enhancement of Kv1.3 Potassium Conductance by Extremely Low Frequency Electromagnetic Field

Claudia Cecchetto,Marta Maschietto,Pasquale Boccaccio,Stefano Vassanelli

Multivariate Approaches to Classification in Extragalactic Astronomy

Didier Fraix-Burnet,Marc Thuillard,Asis Kumar Chattopadhyay

The effects of intrinsic noise on the behaviour of bistable cell regulatory systems under quasi-steady state conditions

Roberto de la Cruz,Pilar Guerrero,Fabian Spill,Tomás Alarcón

Effects of 3D Geometries on Cellular Gradient Sensing and Polarization

Fabian Spill,Vivi Andasari,Michael Mak,Roger D. Kamm,Muhammad H. Zaman

Analysis of Reaction Network Systems Using Tropical Geometry

Satya Swarup Samal,Dima Grigoriev,Holger Fr？hlich,Ovidiu Radulescu

Uncertainty analysis and composite hypothesis under the likelihood paradigm

André Chalom,Paulo Inácio de Knegt López de Prado

The statistical mechanics of schooling fish captures their interactions

Maksym Romenskyy,James E. Herbert-Read,Ashley J. W. Ward,David J. T. Sumpter

Genomic study of the Ket: a Paleo-Eskimo-related ethnic group with significant ancient North Eurasian ancestry

Pavel Flegontov,Piya Changmai,Anastassiya Zidkova,Maria D. Logacheva,Olga Flegontova,Mikhail S. Gelfand,Evgeny S. Gerasimov,Ekaterina E. Khrameeva,Olga P. Konovalova,Tatiana Neretina,Yuri V. Nikolsky,George Starostin,Vita V. Stepanova,Igor V. Travinsky,Martin T？íska,Petr T？íska,Tatiana V. Tatarinova

Neighbourhoods of phylogenetic trees: exact and asymptotic counts

Jamie V. De Jong,Jeanette C McLeod,Mike Steel

Lower Bound on the Rate of Adaptation in an Asexual Population

Michael Kelly

Estimating Reproducibility in Genome-Wide Association Studies

Wei Jiang,Jing-Hao Xue,Weichuan Yu

The mysterious orphans of Mycoplasmataceae

Tatiana V. Tatarinova,Inna Lysnyansky,Yuri V. Nikolsky,Alexander Bolshoy

Biases in differential expression analysis of RNA-seq data: A matter of replicate type

Sora Yoon,Dougu Nam

Bayesian hierarchical modelling for inferring genetic interactions in yeast

Jonathan Heydari,Conor Lawless,David A. Lydall,Darren J. Wilkinson

SCARs: endogenous human stem cell-associated retroviruses and therapy-resistant malignant tumors

Gennadi Glinsky

Time traces of individual kinesin motors suggest functional heterogeneity

Babu J. N. Reddy,Suvranta Tripathy,Jing Xu,Michelle Mattson,Karim Arabi,Michael Vershinin,Steven Gross,Changbong Hyeon

Twisted trees and inconsistency of tree estimation when gaps are treated as missing data -- the impact of model mis-specification in distance corrections

Emily Jane McTavish,Mike Steel,Mark T. Holder

The generalised quasispecies

Rapha？l Cerf,Joseba Dalmau

Mathematical Modeling and Stability of Predator-Prey Systems

Altair Santos de Oliveira Sobrinho,Camila Foga？a de Oliveira,Carolina Massae Kita,érica Regina Takano Natti,Paulo Laerte Natti

The influence of the migration network topology on the stability of a small food web

Jonas Richhardt,Sebastian Plitzko,Florian Schwarzmüller,Barbara Drossel

Finding a Mate With No Social Skills

Chris Marriott,Jobran Chebib

A test of multiple correlation temporal window characteristic of non-Markov processes

Tito Arecchi,Alessandro Farini,Nicola Megna

Power spectrum and diffusion of the Amari's neural field

Luca Salasnich

Lattice Percolation Approach to Numerical Modeling of Tissue Aging

Vladimir Privman,Vyacheslav Gorshkov,Sergiy Libert

TiMEx: A Waiting Time Model for Mutually Exclusive Groups of Cancer Alterations

Simona Constantinescu,Ewa Szczurek,Pejman Mohammadi,J？rg Rahnenführer,Niko Beerenwinkel

InferenceMAP: Mapping of Single-Molecule Dynamics with Bayesian Inference

Mohamed El Beheiry,Maxime Dahan,Jean-Baptiste Masson

Building Proteins in a Day: Efficient 3D Molecular Reconstruction

Marcus A. Brubaker,Ali Punjani,David J. Fleet

Probabilistic modeling of occurring substitutions in PAR-CLIP data

Monica Golumbeanu,Pejman Mohammadi,Niko Beerenwinkel

Improving the Presentation and Understanding of Risk Models

Ralph H. Stern,Dean E. Smith,Hitinder S. Gurm

Critical Waves and the Length Problem of Biology

R. B. Laughlin

Stochastic lumping analysis for linear kinetics and its application to the fluctuation relations between hierarchical kinetic networks

De-Ming Deng,Cheng-Hung Chang

Symbolic dynamics of biochemical pathways as finite states machines

Ovidiu Radulescu,Satya Swarup Samal,Aurélien Naldi,Dima Grigoriev,Andreas Weber

Outcome prediction in mathematical models of immune response to infection

Manuel Mai,Kun Wang,Greg Huber,Michael Kirby,Mark D. Shattuck,Corey S. O'Hern

Self-organization of grid fields under supervision of place cells in the model of neuron with associative plasticity

Andrey Stepanyuk

Eye-Movement Control During the Reading of Chinese: An Analysis Using the Landolt-C Paradigm

Yanping Liu,Erik D. Reichle,Ren Huang

On Simplicity and Complexity in the Brave New World of Large-Scale Neuroscience

Peiran Gao,Surya Ganguli

Rate Control Management of Atrial Fibrillation: May a Mathematical Model Suggest an Ideal Heart Rate?

Matteo Anselmino,Stefania Scarsoglio,Carlo Camporeale,Andrea Saglietto,Fiorenzo Gaita,Luca Ridolfi

Motor-free actin bundle contractility driven by molecular crowding

J？rg Schnau？,Tom Golde,Carsten Schuldt,B. U. Sebastian Schmidt,Martin Glaser,Dan Strehle,Claus Heussinger,Josef A. K？s

Dynamics of p53 and Wnt cross talk

Md. Zubbair Malik,Shahnawaz Ali,Md. Jahoor Alam,Romana Ishrat,R. K. Brojen Singh

Liquids that form due to dynamics of the molecules that depend on the local density

Richard P. Sear

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