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Quantitative Biology

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主页: http://arxiv.org/archive/q-bio

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Gene induction during differentiation of human monocytes into dendritic cells: an integrated study at the RNA and protein levels

C. Angénieux,D. Fricker,J. M. Strub,S. Luche,H. Bausinger,J. P. Cazenave,A. Van Dorsselaer,D. Hanau,H. de la Salle,T. Rabilloud

The Neurobiology Of Thinking, Identity, And Geniality

Robert Skopec

Face Recognition in the Machine Reveals Properties of Human Face Recognition

Matthias S. Keil,Agata Lapedriza,David Masip,Jordi Vitria

An FFT based measure of phase synchronization

Kaushik Majumdar

Folding of small proteins: A matter of geometry?

P. F. N. Faisca,M. M. Telo da Gama

Hydromechanical considerations on the origin of the pentaradial body structure of echinoderms

Michael Gudo

Combinatorial rules of icosahedral capsid growth

Richard Kerner

Ions in Fluctuating Channels: Transistors Alive

Bob Eisenberg

Nonlinear aspects of the EEG during sleep in children

Matthew J. Berryman,Scott W. Coussens,Yvonne Pamula,Declan Kennedy,Kurt Lushington,Cosma Shalizi,Andrew Allison,A. James Martin,David Saint,Derek Abbott

Mutation model for nucleotide sequences based on crystal basis

C. Minichini,A. Sciarrino

Sequence heterogeneity and the dynamics of molecular motors

Yariv Kafri,David R. Nelson

Simulation of geographical trends in Chowdhury ecosystem model

Klaus Rohde,Dietrich Stauffer

Collective Chaos Induced by Structures of Complex Networks

Huijie Yang,Fangcui Zhao,Binghong Wang

Error thresholds in a mutation-selection model with Hopfield-type fitness

Tini Garske

A Predation Behavior Model Based on Game Theory

Shi Chen,Sheng Bao,Ling Yan,Cheng Huang

Evolution of polymorphism and sympatric speciation through competition in a unimodal distribution of resources

E. Brigatti,J. S. Sa' Martins,I. Roditi

Ab initio identification of putative human transcription factor binding sites by comparative genomics

Davide Cora',Carl Herrmann,Christoph Dieterich,Ferdinando Di Cunto,Paolo Provero,Michele Caselle

On the Complexity of Several Haplotyping Problems

Rudi Cilibrasi,Leo van Iersel,Steven Kelk,John Tromp

Quasispecies and recombination

Martin Nilsson Jacobi,Mats Nordahl

Modeling the dynamics of inhomogeneous natural rotifer populations under toxicant exposure

Georgy P. Karev,Artem S. Novozhilov,Faina S. Berezovskaya

Freely forming groups: Trying to be rare

Michael Baake,Uwe Grimm,Harald Jockusch

Pure competition of multiple species during mixed-substrate microbial growth: Extending the resource-based theory

Atul Narang,Sergei S. Pilyugin

Fermentation kinetics including product and substrate inhibitions plus biomass death: a mathematical analysis

Mathieu Bouville

Speciational view of macroevolution: are micro and macroevolution decoupled?

V. Schwammle,E. Brigatti

A Cognitive Model of an Epistemic Community: Mapping the Dynamics of Shallow Lake Ecosystems

Can O. Tan,Uygar Ozesmi

Mathematical modeling of evolution of horizontally transferred genes

Artem S. Novozhilov,Georgy P. Karev,Eugene V. Koonin

Comparative analysis of some models of mixed-substrate microbial growth

Atul Narang

Fixation of strategies for an evolutionary game in finite populations

Tibor Antal,Istvan Scheuring

Universality of Long-Range Correlations in Expansion-Randomization Systems

Philipp W. Messer,Michael Lassig,Peter F. Arndt

Inferring DNA sequences from mechanical unzipping: an ideal-case study

V. Baldazzi,S. Cocco,E. Marinari,R. Monasson

Characterizing Polygonality in Biological Structures

Luciano da Fontoura Costa,Fernando Rocha,Silene Araujo de Lima

Population genetics of translational robustness

Claus O. Wilke,D. Allan Drummond

An intermediate phase in DNA melting

Richard A. Neher,Ulrich Gerland

Design of amino acid sequences to fold into C_alpha-model proteins

A. Amatori,G. Tiana,L. Sutto,J. Ferkinghoff-Borg,A. Trovato,R. A. Broglia

Specificity of Trypsin and Chymotrypsin: Loop Motion Controlled Dynamic Correlation as a Determinant

Wenzhe Ma,Chao Tang,Luhua Lai

Geometry of proteins: hydrogen bonding, sterics and marginally compact tubes

Jayanth R. Banavar,Marek Cieplak,Alessandro Flammini,Trinh X. Hoang,Randall D. Kamien,Timothy Lezon,Davide Marenduzzo,Amos Maritan,Flavio Seno,Yehuda Snir,Antonio Trovato

Structure calculation strategies for helical membrane proteins; a comparison study

Ileana Stoica

Inferring interactions from combinatorial protein libraries

Jeffrey B. Endelman,Jesse D. Bloom,Christopher R. Otey,Marco Landwehr,Frances H. Arnold

Another Way to Calculate Fitness from Life History Variables: Solution of the Age-Structured Logistic Equation

Josh Mitteldorf

Quasi-Species and Aggregate Dynamics

Anders Eriksson,Olof G？rnerup,Martin Nilsson Jacobi,Steen Rasmussen

Absolute Rate Theories of Epigenetic Stability

Aleksandra M. Walczak,José N. Onuchic,Peter G. Wolynes

Protocell Self-Reproduction in a Spatially Extended Metabolism-Vesicle System

Javier Macia,Ricard V. Sole

Genetically engineered cardiac pacemaker: stem cells transfected with HCN2 gene and myocytes - a model

Sandra Kanani,Alain Pumir,Valentine Krinsky

A single determinant for the rate of yeast protein evolution

D. Allan Drummond,Alpan Raval,Claus O. Wilke

Microbial origin of excess greenhouse gases in glacial ice

H. C. Tung,N. E. Bramall,P. B. Price

Identity Elements of Archaeal tRNA

Bibekanand Mallick,Jayprokas Chakrabarti,Satyabrata Sahoo,Zhumur Ghosh,Smarajit Das

Statistical Mechanics of Two-player Iterated Games

Rui Dilao,Joao Graciano

Template coexistence in prebiotic vesicle models

Daniel G. M. Silvestre,Jose F. Fontanari

Virtual Identification of Essential Proteins Within the Protein Interaction Network of Yeast

Ernesto Estrada

Discretization of Time Series Data

Elena S. Dimitrova,John J. McGee,Reinhard C. Laubenbacher

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