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ISSN: 2333-9721
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Quantitative Biology

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主页: http://arxiv.org/archive/q-bio

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Equations of Motion that Recognize Biochemical Patterns

Eisuke Chikayama

The large core limit of spiral waves in excitable media: A numerical approach

Sebastian Hermann,Georg A. Gottwald

Dynamical phase coexistence: A simple solution to the "savanna problem"

F. Vazquez,C. Lopez,J. M. Calabrese,M. A. Munoz

Error thresholds for self- and cross-specific enzymatic replication

Benedikt Obermayer,Erwin Frey

From gene trees to species trees II: Species tree inference in the deep coalescence model

Louxin Zhang

Evolution of Feedback Loops in Oscillatory Systems

M. Hafner,H. Koeppl,A. Wagner

A ratchet mechanism for amplification in low-frequency mammalian hearing

Tobias Reichenbach,A. J. Hudspeth

The constructive role of diversity on the global response of coupled neuron systems

T. Perez,C. R. Mirasso,R. Toral,J. D. Gunton

Self-similar correlation function in brain resting-state fMRI

Paul Expert,Renaud Lambiotte,Dante R. Chialvo,Kim Christensen,Henrik Jeldtoft Jensen,David J. Sharp,Federico Turkheimer

Comparative power spectral analysis of simultaneous elecroencephalographic and magnetoencephalographic recordings in humans suggests non-resistive extracellular media

Nima Dehghani,Claude Bedard,Sydney S. Cash,Eric Halgren,Alain Destexhe

The Role of Opportunistic Punishment in the Evolution of Cooperation: An application of stochastic dynamics to public good game

Jun-Sok Huhh

Food Quality in Producer-Grazer Models: A Generalized Analysis

Dirk Stiefs,George A. K. van Voorn,Bob W. Kooi,Ulrike Feudel,Thilo Gross

Protein-DNA computation by stochastic assembly cascade

Roy Bar-Ziv,Tsvi Tlusty,Albert Libchaber

Neuronal Response Clamp

Avner Wallach,Danny Eytan,Asaf Gal,Christoph Zrenner,Ron Meir,Shimon Marom

Selective Adsorption and Chiral Amplification of Amino Acids in Vermiculite Clay -Implications for the origin of biochirality

Donald G. Fraser,Daniel Fitz,Thomas Jakschitz,Bernd M. Rode

Structural and dynamic properties of linker histone H1 binding to DNA

Rolf Dootz,Adriana Cristina Toma,Thomas Pfohl

Dominant folding pathways of a peptide chain, from ab-initio quantum-mechanical simulations

S. a Beccara,P. Faccioli,G. Garberoglio,M. Sega,F. Pederiva,H. Orland

Stochastic slowdown in evolutionary processes

Philipp M. Altrock,Chaytanya S. Gokhale,Arne Traulsen

Protein abundances and interactions coevolve to promote functional complexes while suppressing non-specific binding

Muyoung Heo,Sergei Maslov,Eugene I. Shakhnovich

Melting of genomic DNA: predictive modeling by nonlinear lattice dynamics

Nikos Theodorakopoulos

Emergence of Intrinsic Representations of Images by Feedforward and Feedback Processes and Bioluminescent Photons in Early Retinotopic Areas

I. Bokkon,V. Salari,J. Tuszynski

Efficiency of autonomous soft nano-machines at maximum power

Udo Seifert

Dynamic Stability and Thermodynamic Characterization in an Enzymatic Reaction at the Single Molecule Level

Moisés Santillán

Cyclic competition of four species: mean field theory and stochastic evolution

Sara O. Case,Clinton H. Durney,Michel Pleimling,R. K. P. Zia

Contact process with a defect: universal oasis, nonuniversal scaling

Zvi Miller,Nadav M. Shnerb

Mathematical models of homochiralisation by grinding of crystals

Jonathan AD Wattis

A simple theory of protein folding kinetics

Vijay S. Pande

Intensities of the Raman bands in the low-frequency spectra of DNA with light and heavy counterions

S. M. Perepelytsya,S. N. Volkov

Protein contact networks at different length scales and role of hydrophobic, hydrophilic and charged residues in protein's structural organisation

Dhriti Sengupta,Sudip Kundu

Conformational Proofreading: The Impact of Conformational Changes on the Specificity of Molecular Recognition

Yonatan Savir,Tsvi Tlusty

Cross-species analysis traces adaptation of Rubisco towards optimality in a low dimensional landscape

Yonatan Savir,Elad Noor,Ron Milo,Tsvi Tlusty

An uncertainty principle underlying the pinwheel structure in the primary visual cortex

Davide Barbieri,Giovanna Citti,Gonzalo Sanguinetti,Alessandro Sarti

Quorum Percolation in Living Neural Networks

Or Cohen,Anna Keselman,Elisha Moses,María Rodríguez Martínez,Jordi Soriano,Tsvi Tlusty

A big-world network in ASD: Dynamical connectivity analysis reflects a deficit in long-range connections and an excess of short-range connections

Pablo Barttfeld,Bruno Wicker,Sebastián Cukier,Silvana Navarta,Sergio Lew,Mariano Sigman

Combined effect of successive competition periods on population dynamics

Masahiro Anazawa

Limit theorems for supercritical age-dependent branching processes with neutral immigration

Mathieu Richard

Coexisting patterns of population oscillations: the degenerate Neimark Sacker bifurcation as a generic mechanism

Christian Guill,Benjamin Reichardt,Barbara Drossel,Wolfram Just

Stability in a population model without random deaths by the Verhulst factor

C. M. N. Pinol,R. S. Banzon

Blow Up of a Cycle in Lotka-Volterra Type Equations with Competition-Cooperation Terms and Quasi-Linear Systems

E. Bouse,D. Rachinskii

Membrane morphology induced by anisotropic proteins

Kiyotaka Akabori,C. D. Santangelo

Induction of microRNAs, mir-155, mir-222, mir-424 and mir-503, promotes monocytic differentiation through combinatorial regulation

A. R. R. Forrest,M. Kanamori-Katayama,Y. Tomaru,T. Lassmann,N. Ninomiya,Y. Takahashi,M. J. L. de Hoon,A. Kubosaki,A. Kaiho,M. Suzuki,J. Yasuda,J. Kawai,Y. Hayashizaki,D. A. Hume,H. Suzuki

Quantum-assisted biomolecular modelling

Sarah Harris,Vivien M. Kendon

Increased entropy of signal transduction in the cancer metastasis phenotype

Andrew Teschendorff,Simone Severini

Optimal pooling strategies for laboratory testing

Brian G. Williams

Voter models on weighted networks

Andrea Baronchelli,Claudio Castellano,Romualdo Pastor-Satorras

A time-dependent Poisson random field model for polymorphism within and between two related biological species

Amei Amei,Stanley Sawyer

Huge progeny production during the transient of a quasi-species model of viral infection, reproduction and mutation

Jose A. Cuesta

Branch lengths on Yule trees and the expected loss of phylogenetic diversity

Arne Mooers,Olivier Gascuel,Tanja Stadler,Heyang Li,Mike Steel

Speeding up evolutionary search by small fitness fluctuations

Jakub Otwinowski,Sorin Tanase-Nicola,Ilya Nemenman

The algebra of the general Markov model on phylogenetic trees and networks

J. G. Sumner,B. H. Holland,P. D. Jarvis

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