The ability to study bacteria at the single cell level has advanced our insights into microbial physiology and genetics in ways not attainable by studying large populations using more traditional culturing methods. To improve methods to characterize bacteria at the cellular level, we developed a new microfluidic platform that enables cells to be exposed to metabolites in a gradient of concentrations. By designing low-cost, three-dimensional devices with adhesive tapes and tailoring them for bact...

Electric Engineering  Biological Materials  Mycology  Biological Chemistry  Veterinary Medicine  Molecular Biology  Toxicology  Computer Engineering  Microbiology  Biochemistry  Agricultural Engineering  Biodiversity  Developmental Biology  Bioengineering  Environmental Sciences  Environmental Sciences  Biological Engineering  Biotechnology  Chemical Engineering & Technology  Hydrology  Genomics  Genetics  Food Science & Technology  Analytical Chemistry 

Doi:10.1021/acssensors.9b01031

The soybean cyst nematode (SCN), Heterodera glycines, is the most damaging pathogen of soybeans in the United States. To assess the severity of nematode infestations in the field, SCN egg population densities are determined. Cysts (dead females) of the nematode must be extracted from soil samples and then ground to extract the eggs within. Sucrose centrifugation commonly is used to separate debris from suspensions of extracted nematode eggs. We present a method using OptiPrep as a density gradie...

Veterinary Medicine  Taxonomy  Automata  Agricultural Engineering  Environmental Sciences  Environmental Sciences  Animal Behavior  Agricultural Science  Biological Engineering  Genomics  Chemical Engineering & Technology  Genetics  Food Science & Technology  Electric Engineering  Industrial Engineering  Computer Engineering  Biochemistry  Biodiversity  Bioengineering  Geology  Hydrology  Parasitology  Plant Science  Soil Science  Synthetic Biology  Agronomy 

Doi:10.1371/journal.pone.0223386

A hallmark of bacterial populations cultured in vitro is their homogeneity of growth, where the majority of cells display identical growth rate, cell size and content. Recent insights, however, have revealed that even cells growing in exponential growth phase can be heterogeneous with respect to variables typically used to measure cell growth. Bacterial heterogeneity has important implications for how bacteria respond to environmental stresses, such as antibiotics. The phenomenon of antimicrobia...

Ecology  Developmental Biology  Agricultural Engineering  Environmental Sciences  Artificial Intelligence  Biological Engineering  Genomics  Chemical Engineering & Technology  Genetics  Food Science & Technology  Diagnostics  Biological Materials  Electric Engineering  Genetic Engineering  Industrial Engineering  Computer Engineering  Health Policy  Biochemistry  Biodiversity  Bioengineering  Bioinformatics  Biophysics  Biotechnology  Computational Biology  Cell Biology  Infectious Diseases  Immunology  Internal Medicine  Metabolic Sciences  Medical Genetics  Allergy & Clinical Immunology  Zoology  Biological Chemistry  Applied Physics  Taxonomy  Medicinal Chemistry  Agricultural Science  Analytical Chemistry  Mycology  Public Health  Mathematical Biology  Marine Biology  Molecular Biology  Microbiology  Global Health  Parasitology  Plant Science  Translational Medicine  Soil Science  Synthetic Biology  Materials Engineering 

Doi:10.1016/j.ohx.2021.e00249

Population-scale and rapid testing for SARS-CoV-2 continues to be a priority for several parts of the world. We revisit the in vitro technology platforms for COVID-19 testing and diagnostics—molecular tests and rapid antigen tests, serology or antibody tests, and tests for the management of COVID-19 patients. Within each category of tests, we review the commercialized testing platforms, their analyzing systems, specimen collection protocols, testing methodologies, supply chain logistics, and rel...

Allergy & Clinical Immunology  Electrochemistry  Information Technologies  Medical Education  Biological Chemistry  Virology  Medicinal Chemistry  Developmental Biology  Environmental Sciences  Biological Engineering  Genomics  Genetics  Food Science & Technology  Marketing  Oncology  Technology And Innovation  Theoretical Chemistry  Diagnostics  Supply Chain Management  Biological Materials  Nanometer Materials  Drugs & Devices  Public Health  Organic Chemistry  Epidemiology  Sales Management  Molecular Biology  Health Policy  Microbiology  Global Health  Bioengineering  Physical Chemistry  Bioinformatics  Biotechnology  Functional Materials  Computational Biology  Cell Biology  Parasitology  Translational Medicine  Infectious Diseases  Women’s Health  Immunology  Respiratory Medicine  Materials Engineering  Internal Medicine  Metabolic Sciences  Medical Genetics 

Doi:10.3390/s21196581

Real-time monitoring of the gastrointestinal tract in a safe and comfortable manner is valuable for the diagnosis and therapy of many diseases. Within this realm, our review captures the trends in ingestible capsule systems with a focus on hardware and software technologies used for capsule endoscopy and remote patient monitoring. We introduce the structure and functions of the gastrointestinal tract, and the FDA guidelines for ingestible wireless telemetric medical devices. We survey the advanc...

Software Engineering  Allergy & Clinical Immunology  Medical Education  Veterinary Medicine  Simulation/Analytical Evaluation of Communication Systems  Self-Stabilization, Autonomic Computing  Clinical Medicine  Automata  Technology  Computational Robotics  Environmental Sciences  Cloud Computing  Artificial Intelligence  Mobile and Portable Communications Systems  Mobile and Ubiquitous Networks  Applications of Communication Systems  Biological Engineering  Chemical Engineering & Technology  Genetics  Multimedia/Signal processing  Machine Learning  Pathology  Biological Materials  Electric Engineering  Public Health  Evidence Based Medicine  Gastroenterology & Hepatology  Health Policy  Computer Engineering  Global Health  Image Processing  Bioengineering  Mechanical Engineering  Bioinformatics  Biotechnology  Functional Materials  Computer Vision  Urology  Infectious Diseases  Women’s Health  Synthetic Biology  Materials Engineering  Radiology & Medical Imaging  Internal Medicine  Metabolic Sciences 

Doi:10.34133/2021/9854040

The animal model response against genetically modifed product may provide food safety information. This study was performed to observe behavior, histopathology and physiological responses of Wistar rat fed on the diet containing growth hormone (GH) transgenic common carp (Cyprinus carpio) meal (Ccm). Thirty rats of three-month-old (BW: 115.67–139.50g) were divided into fve treatments (six rats per treatment). The treatments were rats fed on the commercial diet without Ccm (control), a re-pellete...

Animal Behavior  Histology  Genetics  Cell Biology 

Doi:10.4308/hjb.26.1.1

Jatropha curcas (J. curcas) is usually monoecious plants, which have male and female flowers on the same inflorescence. However, J. curcas can be found as an androgynomonoecious plant (have male, female, and hermaphrodite flowers), even though very rare. Androgynomonoecious J. curcas can be identified after six months of planting when it had started flowering. Therefore, it is important to identify the characteristics of androgynomonoecious J. curcas that can differentiate between androgynomonoe...

Genetics  Plant Science 

Doi:10.4308/hjb.26.3.139

Oil palm is used in food, fuel and cosmetic industries. Tissue culture is the best way to propagate oil palm; unfortunately the somatic embryogenesis during tissue culture takes long time. The molecular mechanism of somatic embryogenesis in oil palm remains unknown. Recent research reported that auxin plays an important role in early and post-embryogenic plant. PHYTOCHROME-INTERACTING FACTOR4 (PIF4) regulates levels of auxin and the expression of key auxin biosynthesis genes. Our research aims t...

Genetics  Plant Science 

Doi:10.4308/hjb.26.4.172

A novel gene (CAS2) specifically expressed during appressorium formation was isolated from Colletotrichum gloeosporioides using Differential Display RT-PCR. CAS2 comprises 368 deduced amino acid residues and is 50% identical to a hypothetical protein from Chaetomium globosum. ProtFun 2.2 server analysis predicted that Cas2 functions as a transport and binding protein. Based on putative transmembrane domain prediction software (HMMTOP), Cas2 protein is composed of five alpha-helical transmembrane...

Mycology  Genetics  Biodiversity 

Doi:10.4308/hjb.27.2.107

Parthenogenesis is an artificial oocytes activation process without paternal contribution. Blastocyst, derived from parthenogenesis, is one of potential source for pluripotent stem cell propagation. Unfortunately, previous studies reported that parthenogenetic embryo did not achieve exhilarating blastocyst rate. One of the component that predicted inhibit parthenogenetic embryo development is phosphate. Therefore, we try to modify culture medium in order to overcome that problem. The aim of this...

Zoology  Molecular Biology  Genetics  Cell Biology 

Doi:10.4308/hjb.27.2.89