Total of 12 articles.


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Jan 12, 2023Open    AccessArticle

Adhesive Tape Microfluidics with an Autofocusing Module That Incorporates CRISPR Interference: Applications to Long-Term Bacterial Antibiotic Studies

Taejoon Kong, Nicholas Backes, Upender Kalwa, Christopher M. Legner, Gregory J. Phillips, and Santosh Pandey
The ability to study bacteria at the single cell level has advanced our insights into microbial physiology and genetics in ways not attainable by studying large populations using more traditional culturing methods. To improve methods to characterize bacteria at the cellular level, we developed a new microfluidic platform that enables cells to be exposed to metabolites in a gradient of concentrations. By designing low-cost, three-dimensional devices with adhesive tapes and tailoring them for bact...

Electric Engineering  Biological Materials  Mycology  Biological Chemistry  Veterinary Medicine  Molecular Biology  Toxicology  Computer Engineering  Microbiology  Biochemistry  Agricultural Engineering  Biodiversity  Developmental Biology  Bioengineering  Environmental Sciences  Environmental Sciences  Biological Engineering  Biotechnology  Chemical Engineering & Technology  Hydrology  Genomics  Genetics  Food Science & Technology  Analytical Chemistry 

Jan 12, 2023Open    AccessArticle

Scan4CFU: Low-cost, open-source bacterial colony tracking over large areas and extended incubation times

Santosh Pandey, Yunsoo Park, Ankita Ankita, Gregory J. Phillips
A hallmark of bacterial populations cultured in vitro is their homogeneity of growth, where the majority of cells display identical growth rate, cell size and content. Recent insights, however, have revealed that even cells growing in exponential growth phase can be heterogeneous with respect to variables typically used to measure cell growth. Bacterial heterogeneity has important implications for how bacteria respond to environmental stresses, such as antibiotics. The phenomenon of antimicrobia...

Ecology  Developmental Biology  Agricultural Engineering  Environmental Sciences  Artificial Intelligence  Biological Engineering  Genomics  Chemical Engineering & Technology  Genetics  Food Science & Technology  Diagnostics  Biological Materials  Electric Engineering  Genetic Engineering  Industrial Engineering  Computer Engineering  Health Policy  Biochemistry  Biodiversity  Bioengineering  Bioinformatics  Biophysics  Biotechnology  Computational Biology  Cell Biology  Infectious Diseases  Immunology  Internal Medicine  Metabolic Sciences  Medical Genetics  Allergy & Clinical Immunology  Zoology  Biological Chemistry  Applied Physics  Taxonomy  Medicinal Chemistry  Agricultural Science  Analytical Chemistry  Mycology  Public Health  Mathematical Biology  Marine Biology  Molecular Biology  Microbiology  Global Health  Parasitology  Plant Science  Translational Medicine  Soil Science  Synthetic Biology  Materials Engineering 

Jan 12, 2023Open    AccessArticle

COVID-19 Testing and Diagnostics: A Review of Commercialized Technologies for Cost, Convenience and Quality of Tests

Ashler Benda, Lukas Zerajic, Ankita Ankita, Erin Cleary, Yunsoo Park, Santosh Pandey
Population-scale and rapid testing for SARS-CoV-2 continues to be a priority for several parts of the world. We revisit the in vitro technology platforms for COVID-19 testing and diagnostics—molecular tests and rapid antigen tests, serology or antibody tests, and tests for the management of COVID-19 patients. Within each category of tests, we review the commercialized testing platforms, their analyzing systems, specimen collection protocols, testing methodologies, supply chain logistics, and rel...

Allergy & Clinical Immunology  Electrochemistry  Information Technologies  Medical Education  Biological Chemistry  Virology  Medicinal Chemistry  Developmental Biology  Environmental Sciences  Biological Engineering  Genomics  Genetics  Food Science & Technology  Marketing  Oncology  Technology And Innovation  Theoretical Chemistry  Diagnostics  Supply Chain Management  Biological Materials  Nanometer Materials  Drugs & Devices  Public Health  Organic Chemistry  Epidemiology  Sales Management  Molecular Biology  Health Policy  Microbiology  Global Health  Bioengineering  Physical Chemistry  Bioinformatics  Biotechnology  Functional Materials  Computational Biology  Cell Biology  Parasitology  Translational Medicine  Infectious Diseases  Women’s Health  Immunology  Respiratory Medicine  Materials Engineering  Internal Medicine  Metabolic Sciences  Medical Genetics 

Sep 23, 2022Open    AccessArticle

Application of Proteomics to Identify Fertility Markers in Angus Bull Sperm

Naseer A. Kutchy, Sule Dogan, Xiaojun Wang, Einko Topper, Abdullah Kaya, Erdogan Memili
The goal of the study was to ascertain sperm proteins as fertility markers in Angus bull sperm using proteomics and validating the markers through comparative sperm biology between Angus and Holstein bulls for which there are reliable fertility data available. We aimed to determine proteins differentially expressed in sperm from Angus bulls with different fertility phenotypes. Two-dimensional differential gel electrophoresis with mass-spectrometry, functional gene clusters, canonical pathways an...

Zoology  Computational Biology  Developmental Biology 

Sep 23, 2022Open    AccessArticle

Cysteamine in Maturation Medium Enhances Nuclear Maturation and Fertilization Rate of Sheep Oocytes In Vitro

Feni Dwi Kartika Gulo, Ni Wayan Kurniani Karja, Mohamad Agus Setiadi
Low nuclear maturation and fertilization rate is one obstacle in the in vitro embryo production which decrease embryo yield. This problem is presumable related with high production of reactive oxygen species (ROS) during maturation process. Glutathione (GSH) as an antioxidant is well known to overcome effect of ROS production. GSH synthesis in the cytosol part of the oocyte cytoplasm is influenced by cysteine availability. It is therefore, this research was conducted to evaluate the ability of c...

Anatomy & Physiology  Cell Biology  Developmental Biology 

Apr 10, 2020Open    AccessArticle

ANTIOXIDANT PROPERTIES OF PISONIA ALBA PLANT LEAF EXTRACT

Tamizhazhagan, Pugazhendy, Sakthidasan, and Jayanthi, C2.
The methonolic extract of the leaves of Pisonia alba (PA) were subjected to phytochemical analysis by standard qualitative analysis and the invitro antioxidant activity was evaluated by determination of total antioxidant capacity, 1.1-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging activity, Antioxidant activity, Nitric oxide potential. The analyses revealed that the methanol extract of Co was able to efficiently scavenge the free radicals in a dose dependant manner. The results were compare...

Zoology  Virology  Ecology  Ecosystem Science  Conservation Biology  Developmental Biology  Evolutionary Studies  Entomology  Environmental Sciences  Animal Behavior  Agricultural Science  Histology  Genomics  Genetics  Food Science & Technology  Anthropology  Aquaculture, Fisheries & Fish Science  Biochemistry  Biodiversity  Bioengineering  Biogeography  Bioinformatics  Biophysics  Biotechnology  Computational Biology  Cell Biology 

Mar 24, 2020Open    AccessArticle

INHERITANCE OF POWDERY MILDEW RESISTANCE IN AUROTICA’S INTROGRESSIVE LINES

Tamara Ternovska, Tetiana Iefimenko, Anastasiia Navalihina, Maksym Аntonyuk
Aim. Frequency of alien chromatin inheritance in hybrids from crosses of common wheat and introgressive lines determines whether transfer of alien chromatin controlling desirable trait into common wheat genome would be successful. The paper presents results of introgressive lines assessment for frequency of transfer of alien dominant trait of powdery mildew resistance to their progeny in the crossing with recurrent genotype Aurora, which was a recipient cultivar in the development of these lines...

Plant Science  Developmental Biology 

Apr 04, 2019Open    AccessArticle

ESSAYS ON THE HISTORY OF RUSSIAN AND UKRAINIAN PHYSIOLOGY OF THE 19TH AND THE BEGINNING OF 20TH CENTURIES

Tetiana Zaporozhets, Oleksandr Sanyk
Many new facts and theories have appeared in physiology. The solution of complex physiological problems required collaboration of physiologists, pathologists, biochemists, biophysicists, mathematicians, and other specialists. That was possible due to the rapid development of new technologies as well as the robust foundation laid by the outstanding physiologists of the 19th century. This article describes the activities of outstanding Russian and Ukrainian physiologists of the 19th and the early...

Mathematical Biology  Parasitology  Biochemistry  Developmental Biology  Biophysics 

Apr 04, 2019Open    AccessArticle

EFFECT OF PHYSIOLOGICAL ACTIVE COMPOUNDS ON STATUS OF PROOXIDATIVE-ANTIOXIDATIVE BALANCE AND ACTIVITY OF KREBS CYCLE ENZYMES IN HEART AND LIVER TISSUES UNDER DOXORUBICIN-INDUCED CARDIOMYOPATHY

Volodymyr Dzuba, Olena Kuchmenko, Olexandr Yakovijchuk
A study was conducted to determinate the effects of Tiotriasolin, Qudesan and the precursors of ubiquinone synthesis (EPM-Mg: alpha-tocopherol acetate), 4-hydroxybenzoic acid, methionine, Mg2 ions) on the free radical processes and activity of some Krebs cycle dehydrogenases in rat heart and liver tissues under conditions of doxorubicin-induced cardiomyopathy. Administration of doxorubicin intensified the processes of lipid and protein oxidation and suppressed antioxidant enzymes activity in li...

Zoology  Biochemistry  Developmental Biology 

Apr 04, 2019Open    AccessArticle

SPECIES AND BIOLOGICAL FEATURES OF FUSARIUM GENUS RECEIVED FROM THE GRAIN OF TRITICUM ATSTIVUM L.

Iryna Furtat, Nadiia Ostapiuk, Karina Zhukova
Aim. The purpose of the work is to identify and study particular biological characteristics of the genus Fusarium isolates, received from the Triticum aestivum L grain. Methods. In this paper, the cultural and morphological properties of investigating isolates of micellar fungi are studied in order to identify them to species further. For the detailed characteristics of the isolates, the speed of radial growth of the mycelium and the intensity of spore formation are also determined. Results. Bas...

Plant Science  Developmental Biology 

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