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Characterization of the Dominant Bacterial Communities Associated with Terrestrial Isopod Species Based on 16S rDNA Analysis by PCR-DGGE

DOI: 10.4236/oje.2018.89030, PP. 495-509

Keywords: Microbial Community, PCR-DGGE, Terrestrial Isopod, Symbiont

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Abstract:

From the marine environment, woodlice gradually colonized terrestrial areas benefiting from the symbiotic relationship with the bacterial community that they host. Indeed, they constitute the only group of Oniscidea suborder that has succeed to accomplish their lives in terrestrial even desert surfaces. Herein they play an important role in the dynamic of ecosystems and the decomposition of litter. So to enhance our understanding of the sea-land transition and other process like decomposition and digestion of detritus, we studied the bacterial community associated with 11 specimens of terrestrial isopods belonging to six species using a Culture independent approach (DGGE). Bands sequencing showed that the cosmopolitan species Porcellionides pruinosus has the most microbial diversity. Screening demonstrated the predominance of Proteobacteria followed by members from Actinobacteria, Firmicutes and Cyanobacteria phyla. In fact we detected some symbionts like Wolbachia, Mycoplasma and Spiroplasma for the first time in a terrestrial isopod species.

References

[1]  Hurst, G.D. and Jiggins, F.M. (2000) Male-Killing Bacteria in Insects: Mechanisms, Incidence, and Implications. Emerging Infectious Diseases, 6, 329-336.
https://doi.org/10.3201/eid0604.000402
[2]  Jambu, P., Juchault, P. and Mocquard, J.P. (1987) Experimental Study of the Contribution of the Isopod Crustacean Oniscus asellus to the Transformation of Forest Litter under Sessile Oak. Pedobiologia, 32, 147-156.
[3]  Prosi, F. and Dallinger, R. (1988) Heavy Metals in the Terrestrial Isopod Porcellio scaber Latreille. I. Histochemical and Ultrastructural Characterization of Metal-Containing. Cell Biology and Toxicology, 4, 81-96.
https://doi.org/10.1007/BF00141288
[4]  Lapanje, A., Rupnik, M. and Drobne, D. (2007) Gut Bacterial Community Structure (Porcellio scaber, Isopoda, Crustacea) as a Measure of Community Level Response to Long-Term and Short-Term Metal Pollution. Environmental Toxicology and Chemistry, 26, 755-763.
https://doi.org/10.1897/06-099R.1
[5]  Lapanje, A., Drobne, D., Nolde, N., Valant, J., Muscet, B., Leser, V. and Rupnik, M. (2008) Long-Term Hg Pollution Induced Hg Tolerance in the Terrestrial Isopod Porcellio scaber (Isopoda, Crustacea). Environmental Pollution, 153, 537-547.
https://doi.org/10.1016/j.envpol.2007.09.016
[6]  Edney, E.B. (1968) Transition from Water to Land in Isopod Crustaceans. American Zoologist, 8, 309-326.
https://doi.org/10.1093/icb/8.3.309
[7]  Douglas, A.E. (1994) Symbiotic Interactions, Vol. Oxford University Press, Oxford.
[8]  Stouthamer, R., Breeuwer, J.A. and Hurst, G.D. (1999) Wolbachia pipientis: Microbial Manipulator of Arthropod Reproduction. Annual Review of Microbiology, 53, 71-102.
https://doi.org/10.1146/annurev.micro.53.1.71
[9]  Fleury, F., Vavre, F., Ris, N., Fouillet, P. and Bouletreau, M. (2000) Physiological Cost Induced by the Maternally-Transmitted Endosymbiont Wolbachia in the Drosophila Parasitoid Leptopilina heterotoma. Parasitology, 121, 493-500.
https://doi.org/10.1017/S0031182099006599
[10]  Nakamura, Y., Kawai, S., Yukuhiro, F., Ito, S., Gotoh, T., Kisimoto, R., Yanase, T., Matsumoto, Y., Kageyama, D. and Noda, H. (2009) Prevalence of Cardinium Bacteria in Planthoppers and Spider Mites and Taxonomic Revision of “Candidatus Cardinium hertigii” Based on Detection of a New Cardinium Group from Biting Midges. Applied Environmental Microbiology, 75, 6757-6763.
https://doi.org/10.1128/AEM.01583-09
[11]  Sicard, M., Hinsinger, J., Le Brun, N., Pages, S., Boemare, N.E. and Moulia, C. (2006) Inter-Specific Competition between Entomopathogenic Nematodes (Steinernema) Is Modified by Their Bacterial Symbionts (Xenorhabdus). BMC Evolutionary Biology, 6, 68.
https://doi.org/10.1186/1471-2148-6-68
[12]  Charlat, S., Duplouy, A., Hornett, E.A., Dyson, E.A. and Davies, N. (2009) The Joint Evolutionary Histories of Wolbachia and Mitochondria in Hypolimnas bolina. BMC Evolutionary Biology, 9, 64.
https://doi.org/10.1186/1471-2148-9-64
[13]  Zimmer, M. and Topp, W. (1998) Microorganisms and Cellulose Digestion in the Gut of the Woodlouse Porcellio scaber. Chemistry and Ecology, 24, 1397-1408.
https://doi.org/10.1023/A:1021235001949
[14]  Zimmer, M., Danko, J.P. and Pennings, S.C. (2002) Cellulose Digestion and Phenol Oxidation in Coastal Isopods (Crustacea: Isopoda). Marine Biology, 140, 1207-1213.
https://doi.org/10.1007/s00227-002-0800-2
[15]  Chandler, S.M., Wilkinson, T.L. and Douglas, A.E. (2008) Impact of Plant Nutrients on the Relationship between a Herbivorous Insect and Its Symbiotic Bacteria. Biological Science, 275, 565-570.
https://doi.org/10.1098/rspb.2007.1478
[16]  Hopkin, S.P. and Martin, M.H. (1982) The Distribution of Zinc, Cadmium, Lead and Copper within the Woodlouse Oniscus asellus (Crustacea, Isopoda). Oecologia, 54, 227-232.
https://doi.org/10.1007/BF00378396
[17]  Fraune, S. and Zimmer, M. (2008) Specificity of the Host Environment Transmitted Mycoplasma-Like Isopods Symbiotes. Environmental Microbiology, 10, 2497-2504.
https://doi.org/10.1111/j.1462-2920.2008.01672.x
[18]  Goffredi, S.K. (2011) Indigenous Ectosymbiotic Bacteria Associated with Diverse Hydrothermal Vent Invertebrates. Environmental Microbiology, 2, 479-488.
https://doi.org/10.1111/j.1758-2229.2010.00136.x
[19]  Cordaux, R., Paces-Fessy, M., Raimond, M., Michel-Salzat, A, Zimmer, M. and Bouchon, D. (2012) Molecular Characterization and Evolution of Arthropod-Pathogenic Rickettsiella Bacteria. Applied and Environmental Microbiology, 73, 5045-5047.
https://doi.org/10.1128/AEM.00378-07
[20]  Green, S.J., Leigh, M.B. and Neufeld, J.D. (2010) Denaturing Gradient Gel Electrophoresis (DGGE) for Microbial Community Analysis. In: Timmis, K.N., Ed., Handbook of Hydrocarbon and Lipid Microbiology, Springer, Berlin, Heidelberg, 4137-4158.
https://doi.org/10.1007/978-3-540-77587-4_323
[21]  Muyzer, G., de Wall, E.C. and Uitterlinden, A.G. (1993) Profiling of Complex Microbial Populations by Denaturing Gradient Gel Electrophoresis Analysis of Polymerase Chain Reaction Amplified Genes Encoding for 16S rRNA. Applied and Environment Microbiology, 59, 695-700.
[22]  Hamaied-Melki, S. (2008) Systematic, Geographical Repartition and Eco-Biology of the Genus Armadillidium (Brandt, 1833) in Tunisia. Thesis Manuscript, Faculty of Sciences of Tunis, 1-211.
[23]  Vandel, A. (1960) Terrestrial Isopods, 1. Fauna of France, Paris.
[24]  Vandel, A. (1962) Terrestrial Isopods, 2. Fauna of France, Paris.
[25]  Sass, A.M., Sass, H., Coolen, M.J., Cypionka, H. and Overmann, J. (2001) Microbial Communities in the Chemocline of a Hypersaline. Deep-Sea Basin (Urania Basin, Mediterranean Sea). Applied and Environmental Microbiology, 67, 5392-5402.
https://doi.org/10.1128/AEM.67.12.5392-5402.2001
[26]  Dittmer, J., Lesobre, J., Moumen, B. and Bouchon, D. (2016) Host Origin and Tissue Microhabitat Shaping the Microbiota of the Terrestrial Isopod Armadillidium vulgare. FEMS Microbiol Ecology, 92, fiw063.
https://doi.org/10.1093/femsec/fiw063
[27]  Arthofer, W., Riegler, M., Avtzis, D.N. and Stauffer, C. (2009) Evidence of Low Infections and Insect Symbiosis: Wolbachia in the Bark Beetle Pityogenes chalcographus (Coleoptera, Scolytinae). Environmental Microbiology, 11, 1923-1933.
https://doi.org/10.1111/j.1462-2920.2009.01914.x
[28]  Lapanje, A., Zrimec, A., Drobne, D. and Rupnik, M. (2010) Long-Term Hg Pollution-Induced Structural Shifts of Bacterial Community in the Terrestrial Isopod (Porcellio scaber) Gut. Environmental Pollution, 158, 3186-3193.
https://doi.org/10.1016/j.envpol.2010.07.001
[29]  Bouchon, D., Zimmer, M. and Dittmer, J. (2016) The Terrestrial Isopod Microbiome: An All-in-One Toolbox for Animal-Microbe Interactions of Ecological Relevance. Frontiers in Microbiology, 7, 1472.
https://doi.org/10.3389/fmicb.2016.01472
[30]  Ben Nasr, S., Gtari, M. And Azzouna, A. (2010) Detection and Phylogeny of the Bacteria Wolbachia in the Terrestrial Isopod Porcellio laevis Latr. (Crustacea, Oniscoidea), Isolated from Lebna and Bizerte Stations Tunisia. Annals of Microbiology, 60, 43-50.
https://doi.org/10.1007/s13213-009-0001-z
[31]  Michel-Salzat, A., Cordaux, R. and Bouchon, D. (2001) Wolbachia Diversity in the Porcellionides pruinosus Complex of Species (Crustacea: Oniscidea): Evidence for Host-Dependent Patterns of Infection. Heredity, 87, 428-434.
https://doi.org/10.1046/j.1365-2540.2001.00920.x
[32]  Ben Afia Hatira, H., Charfi Cheikhrouha, F. and Bouchon, D. (2008) Preliminary Results on the Infection Status of Terrestrial Isopods in Tunisia by Bacteria of Wolbachia Genus. International Symposium on the Biology of Terrestrial Isopods, 7, 117-123.
[33]  Dobson, S.L., Rattanadechakul, W. and Marsland, E.J. (2004) Fitness Advantage and Cytoplasmic Incompatibility in Wolbachia Single- and Superinfected Aedes albopictus. Heredity, 93, 135-142.
https://doi.org/10.1038/sj.hdy.6800458
[34]  Bove, J.M. (1997) Spiroplasmas: Infectious Agents of Plants, Arthropods and Vertebrates. Wiener Klinische Wochenschrift, 10, 604-612.
[35]  Kageyama, D., Anbutsu, H., Shimada, M. and Fukatsu, T. (2007) Spiroplasma Infection Causes either Early or Late Male Killing in Drosophila, Depending on Maternal Host Age. Naturwissenschaften, 94, 333-337.
https://doi.org/10.1007/s00114-006-0195-x
[36]  Hurst, G.D., Johnson, A.P., Schulenburg, J.H. and Fuyama, Y. (2000) Male-Killing Wolbachia in Drosophila: A Temperature-Sensitive Trait with a Threshold Bacterial Density. Genetics, 156, 699-709.
[37]  Russell, J., Funaro, C.F., Giraldo, Y.M., Goldman-Huertas, B., Suh, D., Kronauer, D.J., Moreau, C.S. and Pierce, N.E. (2012) A Veritable Menagerie of Heritable Bacteria from Ants, Butterflies, and beyond: Broad Molecular Surveys and a Systematic Review. PLoS ONE, 7, e51027.
https://doi.org/10.1371/journal.pone.0051027
[38]  Renate, E. (2010) Sea-Land Transitions in Isopods: Pattern of Symbiont Distribution in Two Species of Intertidal Isopods Ligia pallasii and Ligia occidentalis in the Eastern Pacific. Symbiosis, 51, 107-116.
https://doi.org/10.1007/s13199-010-0057-3
[39]  Razin, S. (2006) The Genus Mycoplasma and Related Genera (Class Mollicutes). The Prokaryotes, 4, 836-904.
https://doi.org/10.1007/0-387-30744-3_29
[40]  Wang, Y., Brune, J. and Zimmer, M. (2007) Bacterial Symbionts in the Hepatopancreas of Isopods: Diversity and Environmental Transmission. FEMS Microbiology Ecology, 61, 141-152.
https://doi.org/10.1111/j.1574-6941.2007.00329.x
[41]  Komárek, S., Koupil, J. and Lonská, V. (1992) Antimicrobial Activity of Composite Filling Materials. Sb Ved Pr Lek Fak Karlovy Univerzity Hradci Kralove Suppl Czech, 35, 243-252.
[42]  Tsuchida, T., Koga, R. and Fukatsu, T. (2004) Host Plant Specialization Governed by Facultative Symbiont. Science, 303, 1989.
https://doi.org/10.1126/science.1094611
[43]  Montllor, C.B., Maxmen, A. and Purcell, A.H. (2002) Facultative Bacterial Endosymbionts Benefit Pea Aphids Acyrthosiphon pisum under Heat Stress. Ecological Entomology, 27, 189-195.
https://doi.org/10.1046/j.1365-2311.2002.00393.x
[44]  Horváthová, T., Kozlowski, J. and Bauchinger, U. (2015) Growth Rate and Survival of Terrestrial Isopods Is Related to Possibility to Acquire Symbionts. European Journal of Soil Biology, 69, 52-56.
https://doi.org/10.1016/j.ejsobi.2015.05.003
[45]  Ma, L., Yang, W., Meng, F., Ji, S., Xin, H. and Cao, B. (2015) Characterization of an Acidic Cellulase Produced by Bacillus subtilis BY-4 Isolated from Gastrointestinal Tract of Tibetan Pig. Journal of the Taiwan Institute of Chemical Engineers, 56, 67-72.
https://doi.org/10.1016/j.jtice.2015.04.025
[46]  John, P. and Whatley, F.R. (1975) Paracoccus denitrificans and the Evolutionary Origin of the Mitochondria. Nature, 254, 495-498.
https://doi.org/10.1038/254495a0
[47]  Morel, G. (1976) Host-Parasite Relationship in Buthus occitanus Scorpion Diseases. Comptes Rendus Col. Arachnologie Fr., Les Eyzies, 100-105.

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