%0 Journal Article %T Mycobacterium abscessus virulence traits unraveled by transcriptomic profiling in amoeba and macrophages %A Alexandre Pawlik %A Anouchka Bories %A Fabienne Girard-Misguich %A Hugo Varet %A Jean-Louis Gaillard %A Jean-Louis Herrmann %A Jean-Yves Copp¨¦e %A Mar¨ªa del Pilar Rodr¨ªguez-Ord¨®£¿ez %A Odile Sismeiro %A Rachel Legendre %A Roland Brosch %A Vincent Le Moigne %A Violaine Dubois %J - %D 2019 %R 10.1371/journal.ppat.1008069 %X Free-living amoebae are thought to represent an environmental niche in which amoeba-resistant bacteria may evolve towards pathogenicity. To get more insights into factors playing a role for adaptation to intracellular life, we characterized the transcriptomic activities of the emerging pathogen Mycobacterium abscessus in amoeba and murine macrophages (M£¿) and compared them with the intra-amoebal transcriptome of the closely related, but less pathogenic Mycobacterium chelonae. Data on up-regulated genes in amoeba point to proteins that allow M. abscessus to resist environmental stress and induce defense mechanisms, as well as showing a switch from carbohydrate carbon sources to fatty acid metabolism. For eleven of the most upregulated genes in amoeba and/or M£¿, we generated individual gene knock-out M. abscessus mutant strains, from which ten were found to be attenuated in amoeba and/or M£¿ in subsequence virulence analyses. Moreover, transfer of two of these genes into the genome of M. chelonae increased the intra-M£¿ survival of the recombinant strain. One knock-out mutant that had the gene encoding Eis N-acetyl transferase protein (MAB_4532c) deleted, was particularly strongly attenuated in M£¿. Taken together, M. abscessus intra-amoeba and intra-M£¿ transcriptomes revealed the capacity of M. abscessus to adapt to an intracellular lifestyle, with amoeba largely contributing to the enhancement of M. abscessus intra-M£¿ survival %K Transcriptome analysis %K Mycobacterium tuberculosis %K Amoebas %K Intracellular pathogens %K Mycobacteria %K Autophagic cell death %K Gene regulation %K Gene expression %U https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1008069