%0 Journal Article
%T Comparing time series transcriptome data between plants using a network module finding algorithm
%A Jiyoung Lee
%A Lenwood S. Heath
%A Ruth Grene
%A Song Li
%J Archive of "Plant Methods".
%D 2019
%R 10.1186/s13007-019-0440-x
%X A workflow of comparative transcriptome analysis between soybean and Arabidopsis. It is composed of three major parts: identification of ortholous pairs between two species using BLAST, RNA-seq analysis to get co-expression networks, and running OrthoClust to cluster genes with orthologous relations. Blue fonts indicates softwares or scripts used in this workflo
%K Comparative transcriptome analysis
%K Network
%K Sequence homology
%K Arabidopsis
%K Soybean
%K Embryo development
%U https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6544932/